Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13310

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
2,871,272	-	cDA1	OKGIIK_13305	0.17	+1.1
2,871,276	+	cDA1	OKGIIK_13305	0.17	-0.0
2,871,486	+	cDA1	OKGIIK_13305	0.38	-0.9
2,871,494	+	cDA1	OKGIIK_13305	0.39	+0.2
2,871,494	+	cDA1	OKGIIK_13305	0.39	-1.5
2,871,494	+	cDA1	OKGIIK_13305	0.39	-2.7
2,871,494	+	cDA1	OKGIIK_13305	0.39	+0.8
2,871,494	+	cDA1	OKGIIK_13305	0.39	+0.6
2,871,495	-	cDA1	OKGIIK_13305	0.39	+1.1
2,871,495	-	cDA1	OKGIIK_13305	0.39	+0.3
2,871,495	-	cDA1	OKGIIK_13305	0.39	+1.1
2,871,495	-	cDA1	OKGIIK_13305	0.39	-0.1
2,871,581	+	cDA1	OKGIIK_13305	0.48	+1.8
2,871,701	+	cDA1	OKGIIK_13305	0.60	-0.3
2,871,701	+	cDA1	OKGIIK_13305	0.60	-0.7
2,871,701	+	cDA1	OKGIIK_13305	0.60	-1.4
2,871,758	+	cDA1	OKGIIK_13305	0.65	-0.2
2,871,758	+	cDA1	OKGIIK_13305	0.65	+0.7
2,871,758	+	cDA1	OKGIIK_13305	0.65	-1.5
2,871,758	+	cDA1	OKGIIK_13305	0.65	-0.9
2,871,758	+	cDA1	OKGIIK_13305	0.65	-0.2
2,871,758	+	cDA1	OKGIIK_13305	0.65	+0.1
2,871,758	+	cDA1	OKGIIK_13305	0.65	-0.2
2,871,758	+	cDA1	OKGIIK_13305	0.65	+0.3
2,871,758	+	cDA1	OKGIIK_13305	0.65	-0.5
2,871,758	+	cDA1	OKGIIK_13305	0.65	+1.3
2,871,758	+	cDA1	OKGIIK_13305	0.65	-0.3
2,871,758	+	cDA1	OKGIIK_13305	0.65	-0.2
2,871,758	+	cDA1	OKGIIK_13305	0.65	-0.3
2,871,759	-	cDA1	OKGIIK_13305	0.66	-0.6
2,871,759	-	cDA1	OKGIIK_13305	0.66	-1.6
2,871,759	-	cDA1	OKGIIK_13305	0.66	-0.9
2,871,759	-	cDA1	OKGIIK_13305	0.66	-0.6
2,871,759	-	cDA1	OKGIIK_13305	0.66	-0.5
2,871,767	+	cDA1	OKGIIK_13305	0.66	-0.7
2,871,767	+	cDA1	OKGIIK_13305	0.66	+0.1
2,871,767	+	cDA1	OKGIIK_13305	0.66	-0.1
2,871,767	+	cDA1	OKGIIK_13305	0.66	-0.5
2,871,768	-	cDA1	OKGIIK_13305	0.66	+0.5
2,871,768	-	cDA1	OKGIIK_13305	0.66	+0.3
2,871,768	-	cDA1	OKGIIK_13305	0.66	+0.0
2,871,788	+	cDA1	OKGIIK_13305	0.68	-1.2
2,871,788	+	cDA1	OKGIIK_13305	0.68	+0.5
2,871,788	+	cDA1	OKGIIK_13305	0.68	-0.5
2,871,788	+	cDA1	OKGIIK_13305	0.68	-0.6
2,871,788	+	cDA1	OKGIIK_13305	0.68	-0.6
2,871,789	-	cDA1	OKGIIK_13305	0.69	-0.6
2,871,789	-	cDA1	OKGIIK_13305	0.69	-2.5
2,871,789	-	cDA1	OKGIIK_13305	0.69	-1.5
2,871,789	-	cDA1	OKGIIK_13305	0.69	-0.6
2,871,789	-	cDA1	OKGIIK_13305	0.69	-1.4
2,871,822	-	cDA1	OKGIIK_13305	0.72	-1.5
2,871,822	-	cDA1	OKGIIK_13305	0.72	-0.5
2,871,822	-	cDA1	OKGIIK_13305	0.72	+1.1
2,871,875	+	cDA1	OKGIIK_13305	0.77	+0.0
2,871,875	+	cDA1	OKGIIK_13305	0.77	-0.5
2,871,875	+	cDA1	OKGIIK_13305	0.77	+0.9
2,871,875	+	cDA1	OKGIIK_13305	0.77	-0.1
2,871,876	-	cDA1	OKGIIK_13305	0.77	+0.4
2,871,876	-	cDA1	OKGIIK_13305	0.77	-1.5
2,872,040	+				+0.5
2,872,040	+				+0.7
2,872,040	+				-0.9
2,872,041	-				-0.5
2,872,041	-				-0.6
2,872,041	-				+0.2
2,872,100	+				+0.4
2,872,100	+				-0.2
2,872,100	+				-1.3
2,872,101	-				+0.6
2,872,101	-				-0.0
2,872,101	-				-0.3
2,872,101	-				+1.4
2,872,101	-				-0.7
2,872,128	+				-0.2
2,872,196	+				+0.4
2,872,196	+				+0.3
2,872,197	-				-1.2
2,872,197	-				+0.2
2,872,197	-				-0.2
2,872,197	-				-0.2
2,872,289	+	lysR	OKGIIK_13310	0.12	+0.1
2,872,289	+	lysR	OKGIIK_13310	0.12	+0.1
2,872,289	+	lysR	OKGIIK_13310	0.12	+0.3
2,872,290	-	lysR	OKGIIK_13310	0.12	-0.2
2,872,290	-	lysR	OKGIIK_13310	0.12	-0.6
2,872,307	+	lysR	OKGIIK_13310	0.13	+0.7
2,872,307	+	lysR	OKGIIK_13310	0.13	-0.3
2,872,307	+	lysR	OKGIIK_13310	0.13	+1.1
2,872,307	+	lysR	OKGIIK_13310	0.13	-0.9
2,872,307	+	lysR	OKGIIK_13310	0.13	-1.4
2,872,307	+	lysR	OKGIIK_13310	0.13	+0.1
2,872,307	+	lysR	OKGIIK_13310	0.13	+0.4
2,872,308	-	lysR	OKGIIK_13310	0.14	-0.1
2,872,308	-	lysR	OKGIIK_13310	0.14	-0.0
2,872,400	+	lysR	OKGIIK_13310	0.22	+2.0
2,872,400	+	lysR	OKGIIK_13310	0.22	+0.1
2,872,400	+	lysR	OKGIIK_13310	0.22	-1.1
2,872,400	+	lysR	OKGIIK_13310	0.22	-0.8
2,872,400	+	lysR	OKGIIK_13310	0.22	+0.6
2,872,400	+	lysR	OKGIIK_13310	0.22	+0.1
2,872,400	+	lysR	OKGIIK_13310	0.22	-1.5
2,872,400	+	lysR	OKGIIK_13310	0.22	-0.9
2,872,400	+	lysR	OKGIIK_13310	0.22	-0.3
2,872,400	+	lysR	OKGIIK_13310	0.22	-2.0
2,872,400	+	lysR	OKGIIK_13310	0.22	-0.6
2,872,400	+	lysR	OKGIIK_13310	0.22	+0.7
2,872,400	+	lysR	OKGIIK_13310	0.22	+0.5
2,872,401	-	lysR	OKGIIK_13310	0.23	+0.1
2,872,401	-	lysR	OKGIIK_13310	0.23	+1.3
2,872,401	-	lysR	OKGIIK_13310	0.23	-0.9
2,872,401	-	lysR	OKGIIK_13310	0.23	+0.0
2,872,401	-	lysR	OKGIIK_13310	0.23	+0.6
2,872,401	-	lysR	OKGIIK_13310	0.23	+0.1
2,872,401	-	lysR	OKGIIK_13310	0.23	-0.7
2,872,401	-	lysR	OKGIIK_13310	0.23	+0.2
2,872,401	-	lysR	OKGIIK_13310	0.23	-0.9
2,872,401	-	lysR	OKGIIK_13310	0.23	+0.9
2,872,401	-	lysR	OKGIIK_13310	0.23	+0.9
2,872,401	-	lysR	OKGIIK_13310	0.23	+0.0
2,872,401	-	lysR	OKGIIK_13310	0.23	-0.5
2,872,401	-	lysR	OKGIIK_13310	0.23	-0.5
2,872,401	-	lysR	OKGIIK_13310	0.23	-0.5
2,872,401	-	lysR	OKGIIK_13310	0.23	+0.8
2,872,446	-	lysR	OKGIIK_13310	0.27	-0.2
2,872,487	+	lysR	OKGIIK_13310	0.31	+0.9
2,872,487	+	lysR	OKGIIK_13310	0.31	-0.9
2,872,487	+	lysR	OKGIIK_13310	0.31	-0.9
2,872,488	-	lysR	OKGIIK_13310	0.31	+0.4
2,872,488	-	lysR	OKGIIK_13310	0.31	-0.1
2,872,488	-	lysR	OKGIIK_13310	0.31	-0.1
2,872,524	-	lysR	OKGIIK_13310	0.34	+0.9
2,872,601	+	lysR	OKGIIK_13310	0.42	+1.4
2,872,601	+	lysR	OKGIIK_13310	0.42	-0.7
2,872,601	+	lysR	OKGIIK_13310	0.42	-0.2
2,872,601	+	lysR	OKGIIK_13310	0.42	-0.3
2,872,602	-	lysR	OKGIIK_13310	0.42	+0.9
2,872,602	-	lysR	OKGIIK_13310	0.42	+0.8
2,872,778	+	lysR	OKGIIK_13310	0.59	+1.2
2,872,778	+	lysR	OKGIIK_13310	0.59	-0.6
2,872,778	+	lysR	OKGIIK_13310	0.59	-1.5
2,872,778	+	lysR	OKGIIK_13310	0.59	-0.9
2,872,778	+	lysR	OKGIIK_13310	0.59	-1.0
2,872,779	-	lysR	OKGIIK_13310	0.59	+0.7
2,872,779	-	lysR	OKGIIK_13310	0.59	-1.2
2,872,779	-	lysR	OKGIIK_13310	0.59	-3.1
2,872,779	-	lysR	OKGIIK_13310	0.59	-1.7
2,872,779	-	lysR	OKGIIK_13310	0.59	+0.5
2,872,898	+	lysR	OKGIIK_13310	0.71	-0.2
2,872,898	+	lysR	OKGIIK_13310	0.71	-3.1
2,872,898	+	lysR	OKGIIK_13310	0.71	-0.4
2,872,899	-	lysR	OKGIIK_13310	0.71	+0.4
2,872,899	-	lysR	OKGIIK_13310	0.71	-1.2
2,872,899	-	lysR	OKGIIK_13310	0.71	-1.7
2,873,015	+	lysR	OKGIIK_13310	0.82	-1.4
2,873,015	+	lysR	OKGIIK_13310	0.82	+0.4
2,873,015	+	lysR	OKGIIK_13310	0.82	+0.4
2,873,015	+	lysR	OKGIIK_13310	0.82	-0.1
2,873,015	+	lysR	OKGIIK_13310	0.82	-0.5
2,873,015	+	lysR	OKGIIK_13310	0.82	+0.1
2,873,015	+	lysR	OKGIIK_13310	0.82	-0.5
2,873,016	-	lysR	OKGIIK_13310	0.82	+1.9
2,873,016	-	lysR	OKGIIK_13310	0.82	+0.2
2,873,016	-	lysR	OKGIIK_13310	0.82	-2.1
2,873,016	-	lysR	OKGIIK_13310	0.82	-1.9
2,873,099	+				+0.0
2,873,099	+				+0.5
2,873,099	+				+0.7
2,873,100	-				+0.5
2,873,100	-				-0.3
2,873,103	-				+0.8
2,873,103	-				-1.1
2,873,161	+				+0.0
2,873,277	-				+0.3
2,873,277	-				+0.4
2,873,277	-				-0.1
2,873,334	-				+0.2
2,873,334	-				-0.5
2,873,500	+	aceB	OKGIIK_13315	0.11	-0.1
2,873,500	+	aceB	OKGIIK_13315	0.11	-2.2
2,873,500	+	aceB	OKGIIK_13315	0.11	-0.3
2,873,500	+	aceB	OKGIIK_13315	0.11	-0.6
2,873,500	+	aceB	OKGIIK_13315	0.11	+1.1
2,873,501	-	aceB	OKGIIK_13315	0.11	+0.4
2,873,501	-	aceB	OKGIIK_13315	0.11	-0.3
2,873,788	+	aceB	OKGIIK_13315	0.29	-1.2
2,873,956	+	aceB	OKGIIK_13315	0.39	+0.0
2,873,956	+	aceB	OKGIIK_13315	0.39	+0.6
2,873,956	+	aceB	OKGIIK_13315	0.39	-0.5
2,873,956	+	aceB	OKGIIK_13315	0.39	-0.1
2,873,957	-	aceB	OKGIIK_13315	0.40	+0.8
2,873,957	-	aceB	OKGIIK_13315	0.40	-1.8
2,873,957	-	aceB	OKGIIK_13315	0.40	+0.7
2,873,957	-	aceB	OKGIIK_13315	0.40	-0.3
2,873,957	-	aceB	OKGIIK_13315	0.40	+0.1
2,873,957	-	aceB	OKGIIK_13315	0.40	+0.4
2,873,957	-	aceB	OKGIIK_13315	0.40	-1.4
2,873,962	+	aceB	OKGIIK_13315	0.40	+0.1
2,873,962	+	aceB	OKGIIK_13315	0.40	-0.5
2,873,962	+	aceB	OKGIIK_13315	0.40	+0.4
2,873,962	+	aceB	OKGIIK_13315	0.40	-0.9
2,873,962	+	aceB	OKGIIK_13315	0.40	+0.1
2,873,962	+	aceB	OKGIIK_13315	0.40	-1.2
2,873,963	-	aceB	OKGIIK_13315	0.40	-0.3
2,873,963	-	aceB	OKGIIK_13315	0.40	+1.9
2,873,963	-	aceB	OKGIIK_13315	0.40	+0.9
2,873,963	-	aceB	OKGIIK_13315	0.40	+0.9
2,873,963	-	aceB	OKGIIK_13315	0.40	+0.0
2,873,963	-	aceB	OKGIIK_13315	0.40	+0.9
2,873,963	-	aceB	OKGIIK_13315	0.40	-1.1
2,873,963	-	aceB	OKGIIK_13315	0.40	+0.4
2,873,963	-	aceB	OKGIIK_13315	0.40	-1.1
2,874,163	+	aceB	OKGIIK_13315	0.52	-0.3
2,874,163	+	aceB	OKGIIK_13315	0.52	-1.2
2,874,163	+	aceB	OKGIIK_13315	0.52	+0.8
2,874,163	+	aceB	OKGIIK_13315	0.52	-0.1
2,874,164	-	aceB	OKGIIK_13315	0.53	-1.2
2,874,164	-	aceB	OKGIIK_13315	0.53	+0.1
2,874,164	-	aceB	OKGIIK_13315	0.53	+0.5
2,874,164	-	aceB	OKGIIK_13315	0.53	+0.3
2,874,164	-	aceB	OKGIIK_13315	0.53	+0.2
2,874,164	-	aceB	OKGIIK_13315	0.53	+0.2
2,874,164	-	aceB	OKGIIK_13315	0.53	-1.3
2,874,164	-	aceB	OKGIIK_13315	0.53	+1.3
2,874,164	-	aceB	OKGIIK_13315	0.53	+0.7
2,874,164	-	aceB	OKGIIK_13315	0.53	-0.1
2,874,164	-	aceB	OKGIIK_13315	0.53	-0.2
2,874,165	+	aceB	OKGIIK_13315	0.53	-1.7
2,874,165	+	aceB	OKGIIK_13315	0.53	+0.1
2,874,165	+	aceB	OKGIIK_13315	0.53	-0.2
2,874,165	+	aceB	OKGIIK_13315	0.53	+0.3
2,874,165	+	aceB	OKGIIK_13315	0.53	-2.1
2,874,165	+	aceB	OKGIIK_13315	0.53	+0.9
2,874,165	+	aceB	OKGIIK_13315	0.53	-1.0
2,874,165	+	aceB	OKGIIK_13315	0.53	+0.3
2,874,165	+	aceB	OKGIIK_13315	0.53	-0.9
2,874,165	+	aceB	OKGIIK_13315	0.53	-0.3
2,874,165	+	aceB	OKGIIK_13315	0.53	+0.4
2,874,165	+	aceB	OKGIIK_13315	0.53	-0.2
2,874,165	+	aceB	OKGIIK_13315	0.53	-1.3
2,874,165	+	aceB	OKGIIK_13315	0.53	+1.4
2,874,165	+	aceB	OKGIIK_13315	0.53	-0.8
2,874,165	+	aceB	OKGIIK_13315	0.53	-2.1
2,874,165	+	aceB	OKGIIK_13315	0.53	+0.0
2,874,165	+	aceB	OKGIIK_13315	0.53	-0.4
2,874,165	+	aceB	OKGIIK_13315	0.53	+0.8
2,874,165	+	aceB	OKGIIK_13315	0.53	+0.5
2,874,165	+	aceB	OKGIIK_13315	0.53	+0.8
2,874,165	+	aceB	OKGIIK_13315	0.53	+0.3
2,874,166	-	aceB	OKGIIK_13315	0.53	+0.0
2,874,166	-	aceB	OKGIIK_13315	0.53	+0.4
2,874,166	-	aceB	OKGIIK_13315	0.53	+0.9
2,874,166	-	aceB	OKGIIK_13315	0.53	+0.0
2,874,166	-	aceB	OKGIIK_13315	0.53	-0.5
2,874,166	-	aceB	OKGIIK_13315	0.53	-2.2
2,874,166	-	aceB	OKGIIK_13315	0.53	+0.3
2,874,166	-	aceB	OKGIIK_13315	0.53	-0.9
2,874,166	-	aceB	OKGIIK_13315	0.53	+1.7
2,874,166	-	aceB	OKGIIK_13315	0.53	-1.1
2,874,166	-	aceB	OKGIIK_13315	0.53	+0.6
2,874,166	-	aceB	OKGIIK_13315	0.53	+1.4
2,874,166	-	aceB	OKGIIK_13315	0.53	-0.2
2,874,166	-	aceB	OKGIIK_13315	0.53	-1.3
2,874,166	-	aceB	OKGIIK_13315	0.53	-1.0
2,874,166	-	aceB	OKGIIK_13315	0.53	-1.5
2,874,166	-	aceB	OKGIIK_13315	0.53	+0.3
2,874,166	-	aceB	OKGIIK_13315	0.53	-0.5
2,874,167	-	aceB	OKGIIK_13315	0.53	+0.8
2,874,175	+	aceB	OKGIIK_13315	0.53	-0.5
2,874,176	-	aceB	OKGIIK_13315	0.53	-0.2
2,874,176	-	aceB	OKGIIK_13315	0.53	+0.3