Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12345

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
2,653,845	+				-1.9
2,653,846	-				+1.7
2,653,846	-				+0.1
2,654,142	+		OKGIIK_12335	0.46	+1.7
2,654,143	-		OKGIIK_12335	0.46	+0.5
2,654,143	-		OKGIIK_12335	0.46	+0.2
2,654,143	-		OKGIIK_12335	0.46	-0.2
2,654,143	-		OKGIIK_12335	0.46	-0.3
2,654,143	-		OKGIIK_12335	0.46	+0.1
2,654,453	+		OKGIIK_12335	0.86	+0.7
2,654,453	+		OKGIIK_12335	0.86	+0.4
2,654,454	-		OKGIIK_12335	0.86	+0.4
2,654,534	+				+0.4
2,654,534	+				-0.0
2,654,535	-				+0.5
2,654,594	-		OKGIIK_12340	0.10	-0.3
2,654,594	-		OKGIIK_12340	0.10	-0.2
2,654,594	-		OKGIIK_12340	0.10	-0.1
2,654,771	+				-0.8
2,654,771	+				+0.5
2,654,771	+				+0.2
2,654,772	-				-1.1
2,654,811	+	rpiR	OKGIIK_12345	0.14	+0.0
2,654,811	+	rpiR	OKGIIK_12345	0.14	-1.4
2,654,811	+	rpiR	OKGIIK_12345	0.14	-0.1
2,654,812	-	rpiR	OKGIIK_12345	0.14	-1.8
2,654,812	-	rpiR	OKGIIK_12345	0.14	+0.1
2,654,812	-	rpiR	OKGIIK_12345	0.14	+0.3
2,654,812	-	rpiR	OKGIIK_12345	0.14	+0.8
2,654,812	-	rpiR	OKGIIK_12345	0.14	-0.3
2,654,829	+	rpiR	OKGIIK_12345	0.16	+0.0
2,654,829	+	rpiR	OKGIIK_12345	0.16	-1.1
2,654,829	+	rpiR	OKGIIK_12345	0.16	-1.8
2,654,829	+	rpiR	OKGIIK_12345	0.16	-0.3
2,654,829	+	rpiR	OKGIIK_12345	0.16	+0.5
2,654,829	+	rpiR	OKGIIK_12345	0.16	-0.8
2,654,829	+	rpiR	OKGIIK_12345	0.16	-0.8
2,654,830	-	rpiR	OKGIIK_12345	0.16	-0.0
2,654,830	-	rpiR	OKGIIK_12345	0.16	-2.9
2,654,830	-	rpiR	OKGIIK_12345	0.16	+1.2
2,654,830	-	rpiR	OKGIIK_12345	0.16	-0.2
2,654,896	+	rpiR	OKGIIK_12345	0.24	-0.4
2,654,896	+	rpiR	OKGIIK_12345	0.24	+0.3
2,654,896	+	rpiR	OKGIIK_12345	0.24	-1.6
2,654,896	+	rpiR	OKGIIK_12345	0.24	-0.4
2,654,897	-	rpiR	OKGIIK_12345	0.24	+0.0
2,654,897	-	rpiR	OKGIIK_12345	0.24	+0.9
2,654,897	-	rpiR	OKGIIK_12345	0.24	+0.6
2,654,940	+	rpiR	OKGIIK_12345	0.29	-1.5
2,654,940	+	rpiR	OKGIIK_12345	0.29	+0.0
2,654,940	+	rpiR	OKGIIK_12345	0.29	-0.2
2,654,941	-	rpiR	OKGIIK_12345	0.29	-1.6
2,654,941	-	rpiR	OKGIIK_12345	0.29	+0.6
2,654,941	-	rpiR	OKGIIK_12345	0.29	-1.1
2,654,941	-	rpiR	OKGIIK_12345	0.29	-0.1
2,655,215	-	rpiR	OKGIIK_12345	0.61	+0.3
2,655,215	-	rpiR	OKGIIK_12345	0.61	-0.7
2,655,215	-	rpiR	OKGIIK_12345	0.61	+0.4
2,655,215	-	rpiR	OKGIIK_12345	0.61	+0.5
2,655,215	-	rpiR	OKGIIK_12345	0.61	-1.4
2,655,215	-	rpiR	OKGIIK_12345	0.61	-0.4
2,655,215	-	rpiR	OKGIIK_12345	0.61	-1.1
2,655,345	+	rpiR	OKGIIK_12345	0.76	+0.0
2,655,346	-	rpiR	OKGIIK_12345	0.76	-0.9
2,655,346	-	rpiR	OKGIIK_12345	0.76	-1.3
2,655,346	-	rpiR	OKGIIK_12345	0.76	-0.6
2,655,346	-	rpiR	OKGIIK_12345	0.76	-0.4
2,655,444	+	rpiR	OKGIIK_12345	0.88	-0.5
2,655,444	+	rpiR	OKGIIK_12345	0.88	-1.6
2,655,445	-	rpiR	OKGIIK_12345	0.88	+0.2
2,655,445	-	rpiR	OKGIIK_12345	0.88	-1.6
2,655,637	+				+0.7
2,655,638	-				+0.2
2,655,638	-				-0.4
2,655,956	+	rspA	OKGIIK_12350	0.37	+1.6
2,655,956	+	rspA	OKGIIK_12350	0.37	+0.0
2,655,957	-	rspA	OKGIIK_12350	0.37	-2.3
2,655,957	-	rspA	OKGIIK_12350	0.37	-1.0
2,655,957	-	rspA	OKGIIK_12350	0.37	-0.7
2,656,044	-	rspA	OKGIIK_12350	0.45	+0.4
2,656,115	+	rspA	OKGIIK_12350	0.51	+0.9
2,656,115	+	rspA	OKGIIK_12350	0.51	-0.8
2,656,116	-	rspA	OKGIIK_12350	0.52	-3.1
2,656,116	-	rspA	OKGIIK_12350	0.52	+0.5
2,656,229	+	rspA	OKGIIK_12350	0.62	+0.1
2,656,230	-	rspA	OKGIIK_12350	0.62	-0.1
2,656,230	-	rspA	OKGIIK_12350	0.62	+0.3
2,656,230	-	rspA	OKGIIK_12350	0.62	+1.0
2,656,289	+	rspA	OKGIIK_12350	0.67	+0.2
2,656,289	+	rspA	OKGIIK_12350	0.67	+0.2
2,656,289	+	rspA	OKGIIK_12350	0.67	-0.1
2,656,289	+	rspA	OKGIIK_12350	0.67	+0.2
2,656,290	-	rspA	OKGIIK_12350	0.67	-1.8
2,656,290	-	rspA	OKGIIK_12350	0.67	+0.9
2,656,305	-	rspA	OKGIIK_12350	0.69	-1.4
2,656,305	-	rspA	OKGIIK_12350	0.69	-0.2
2,656,305	-	rspA	OKGIIK_12350	0.69	-1.7
2,656,305	-	rspA	OKGIIK_12350	0.69	-0.4
2,656,305	-	rspA	OKGIIK_12350	0.69	+1.0
2,656,325	+	rspA	OKGIIK_12350	0.71	-0.1
2,656,325	+	rspA	OKGIIK_12350	0.71	-1.4
2,656,325	+	rspA	OKGIIK_12350	0.71	-1.4
2,656,326	-	rspA	OKGIIK_12350	0.71	+0.1
2,656,442	+	rspA	OKGIIK_12350	0.81	-0.1
2,656,442	+	rspA	OKGIIK_12350	0.81	-1.4
2,656,442	+	rspA	OKGIIK_12350	0.81	+1.2
2,656,442	+	rspA	OKGIIK_12350	0.81	-3.0
2,656,442	+	rspA	OKGIIK_12350	0.81	-0.3
2,656,442	+	rspA	OKGIIK_12350	0.81	+0.7
2,656,442	+	rspA	OKGIIK_12350	0.81	-0.0
2,656,442	+	rspA	OKGIIK_12350	0.81	-0.5
2,656,442	+	rspA	OKGIIK_12350	0.81	-0.6
2,656,442	+	rspA	OKGIIK_12350	0.81	-2.5
2,656,443	-	rspA	OKGIIK_12350	0.81	+0.2
2,656,443	-	rspA	OKGIIK_12350	0.81	-0.0
2,656,443	-	rspA	OKGIIK_12350	0.81	-0.8
2,656,443	-	rspA	OKGIIK_12350	0.81	+0.2
2,656,443	-	rspA	OKGIIK_12350	0.81	+0.8
2,656,443	-	rspA	OKGIIK_12350	0.81	-1.0
2,656,443	-	rspA	OKGIIK_12350	0.81	-1.5
2,656,443	-	rspA	OKGIIK_12350	0.81	-1.0
2,656,443	-	rspA	OKGIIK_12350	0.81	+0.7
2,656,443	-	rspA	OKGIIK_12350	0.81	+0.8
2,656,443	-	rspA	OKGIIK_12350	0.81	-0.1
2,656,443	-	rspA	OKGIIK_12350	0.81	+0.6
2,656,443	-	rspA	OKGIIK_12350	0.81	+0.3
2,656,443	-	rspA	OKGIIK_12350	0.81	+0.2
2,656,443	-	rspA	OKGIIK_12350	0.81	-0.7
2,656,443	-	rspA	OKGIIK_12350	0.81	-0.3
2,656,443	-	rspA	OKGIIK_12350	0.81	-0.8
2,656,443	-	rspA	OKGIIK_12350	0.81	-0.6