Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_03940 and OKGIIK_03945 are separated by 26 nucleotides OKGIIK_03945 and mutT overlap by 4 nucleotides mutT and OKGIIK_03955 overlap by 4 nucleotides OKGIIK_03955 and caiD are separated by 87 nucleotides
OKGIIK_03940: OKGIIK_03940 - Peptidyl-prolyl cis-trans isomerase, at 864,936 to 865,664
_03940
OKGIIK_03945: OKGIIK_03945 - DUF1289 domain-containing protein, at 865,691 to 865,882
_03945
OKGIIK_03950: mutT - 8-oxo-dGTP pyrophosphatase MutT and related house-cleaning NTP pyrophosphohydrolases, NUDIX family, at 865,879 to 866,472
mutT
OKGIIK_03955: OKGIIK_03955 - Sulfurtransferase, at 866,469 to 867,317
_03955
OKGIIK_03960: caiD - enoyl-CoA hydratase/isomerase family protein, at 867,405 to 868,163
caiD
Position (kb) 865
866
867 Strain fitness (log2 ratio) -2
-1
0
1
2 at 865.056 kb on + strand, within OKGIIK_03940 at 865.056 kb on + strand, within OKGIIK_03940 at 865.057 kb on - strand, within OKGIIK_03940 at 865.057 kb on - strand, within OKGIIK_03940 at 865.057 kb on - strand, within OKGIIK_03940 at 865.057 kb on - strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.147 kb on - strand, within OKGIIK_03940 at 865.147 kb on - strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.338 kb on + strand, within OKGIIK_03940 at 865.338 kb on + strand, within OKGIIK_03940 at 865.339 kb on - strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.405 kb on - strand, within OKGIIK_03940 at 865.405 kb on - strand, within OKGIIK_03940 at 865.405 kb on - strand, within OKGIIK_03940 at 865.428 kb on - strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.677 kb on + strand at 865.677 kb on + strand at 865.678 kb on - strand at 865.678 kb on - strand at 865.678 kb on - strand at 865.678 kb on - strand at 865.998 kb on - strand, within mutT at 866.036 kb on + strand, within mutT at 866.036 kb on + strand, within mutT at 866.036 kb on + strand, within mutT at 866.037 kb on - strand, within mutT at 866.037 kb on - strand, within mutT at 866.194 kb on + strand, within mutT at 866.194 kb on + strand, within mutT at 866.195 kb on - strand, within mutT at 866.195 kb on - strand, within mutT at 866.195 kb on - strand, within mutT at 866.195 kb on - strand, within mutT at 866.272 kb on + strand, within mutT at 866.273 kb on - strand, within mutT at 866.273 kb on - strand, within mutT at 866.350 kb on + strand, within mutT at 866.350 kb on + strand, within mutT at 866.350 kb on + strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.818 kb on + strand, within OKGIIK_03955 at 866.819 kb on - strand, within OKGIIK_03955 at 866.819 kb on - strand, within OKGIIK_03955 at 866.926 kb on - strand, within OKGIIK_03955 at 867.078 kb on + strand, within OKGIIK_03955 at 867.078 kb on + strand, within OKGIIK_03955 at 867.079 kb on - strand, within OKGIIK_03955 at 867.079 kb on - strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.210 kb on + strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.211 kb on - strand, within OKGIIK_03955 at 867.258 kb on + strand at 867.258 kb on + strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.259 kb on - strand at 867.323 kb on + strand at 867.324 kb on - strand at 867.324 kb on - strand at 867.324 kb on - strand at 867.324 kb on - strand at 867.324 kb on - strand at 867.380 kb on + strand at 867.380 kb on + strand at 867.395 kb on + strand at 867.395 kb on + strand at 867.395 kb on + strand at 867.395 kb on + strand at 867.395 kb on + strand at 867.396 kb on - strand at 867.413 kb on + strand at 867.413 kb on + strand at 867.414 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x remove 865,056 + OKGIIK_03940 0.16 -1.0 865,056 + OKGIIK_03940 0.16 +0.2 865,057 - OKGIIK_03940 0.17 -0.2 865,057 - OKGIIK_03940 0.17 +0.1 865,057 - OKGIIK_03940 0.17 -1.2 865,057 - OKGIIK_03940 0.17 +0.9 865,146 + OKGIIK_03940 0.29 +0.8 865,146 + OKGIIK_03940 0.29 +0.2 865,146 + OKGIIK_03940 0.29 -0.2 865,146 + OKGIIK_03940 0.29 -0.8 865,146 + OKGIIK_03940 0.29 -0.8 865,146 + OKGIIK_03940 0.29 +0.5 865,146 + OKGIIK_03940 0.29 +0.3 865,146 + OKGIIK_03940 0.29 -2.0 865,147 - OKGIIK_03940 0.29 +0.4 865,147 - OKGIIK_03940 0.29 +0.1 865,281 + OKGIIK_03940 0.47 +0.3 865,281 + OKGIIK_03940 0.47 -0.0 865,281 + OKGIIK_03940 0.47 +0.8 865,281 + OKGIIK_03940 0.47 -0.6 865,281 + OKGIIK_03940 0.47 +1.2 865,281 + OKGIIK_03940 0.47 +0.4 865,281 + OKGIIK_03940 0.47 +0.5 865,281 + OKGIIK_03940 0.47 +0.5 865,281 + OKGIIK_03940 0.47 +0.2 865,281 + OKGIIK_03940 0.47 -1.8 865,281 + OKGIIK_03940 0.47 -1.4 865,281 + OKGIIK_03940 0.47 -0.0 865,281 + OKGIIK_03940 0.47 -1.1 865,281 + OKGIIK_03940 0.47 -0.6 865,281 + OKGIIK_03940 0.47 +1.9 865,281 + OKGIIK_03940 0.47 -1.4 865,282 - OKGIIK_03940 0.47 -0.1 865,282 - OKGIIK_03940 0.47 +0.7 865,282 - OKGIIK_03940 0.47 +0.6 865,282 - OKGIIK_03940 0.47 -1.0 865,282 - OKGIIK_03940 0.47 -1.1 865,282 - OKGIIK_03940 0.47 +1.0 865,282 - OKGIIK_03940 0.47 +0.3 865,282 - OKGIIK_03940 0.47 +0.2 865,282 - OKGIIK_03940 0.47 -1.4 865,282 - OKGIIK_03940 0.47 -0.2 865,282 - OKGIIK_03940 0.47 +0.2 865,282 - OKGIIK_03940 0.47 -0.4 865,282 - OKGIIK_03940 0.47 -1.1 865,282 - OKGIIK_03940 0.47 -0.2 865,282 - OKGIIK_03940 0.47 +0.2 865,338 + OKGIIK_03940 0.55 -0.4 865,338 + OKGIIK_03940 0.55 -1.1 865,339 - OKGIIK_03940 0.55 -1.0 865,404 + OKGIIK_03940 0.64 -0.4 865,404 + OKGIIK_03940 0.64 -0.8 865,404 + OKGIIK_03940 0.64 +2.1 865,404 + OKGIIK_03940 0.64 -1.1 865,404 + OKGIIK_03940 0.64 +1.1 865,404 + OKGIIK_03940 0.64 +0.4 865,404 + OKGIIK_03940 0.64 +0.5 865,404 + OKGIIK_03940 0.64 +1.2 865,405 - OKGIIK_03940 0.64 -1.5 865,405 - OKGIIK_03940 0.64 -1.6 865,405 - OKGIIK_03940 0.64 -0.8 865,428 - OKGIIK_03940 0.67 +0.8 865,566 + OKGIIK_03940 0.86 +1.7 865,566 + OKGIIK_03940 0.86 -0.2 865,566 + OKGIIK_03940 0.86 +0.2 865,566 + OKGIIK_03940 0.86 -0.4 865,677 + +0.5 865,677 + -0.9 865,678 - -0.5 865,678 - -1.8 865,678 - -2.4 865,678 - +0.7 865,998 - mutT OKGIIK_03950 0.20 +0.2 866,036 + mutT OKGIIK_03950 0.26 -1.4 866,036 + mutT OKGIIK_03950 0.26 -0.2 866,036 + mutT OKGIIK_03950 0.26 +0.1 866,037 - mutT OKGIIK_03950 0.27 -2.2 866,037 - mutT OKGIIK_03950 0.27 -1.6 866,194 + mutT OKGIIK_03950 0.53 -1.7 866,194 + mutT OKGIIK_03950 0.53 -0.6 866,195 - mutT OKGIIK_03950 0.53 -0.2 866,195 - mutT OKGIIK_03950 0.53 -0.1 866,195 - mutT OKGIIK_03950 0.53 -0.6 866,195 - mutT OKGIIK_03950 0.53 -0.4 866,272 + mutT OKGIIK_03950 0.66 -0.8 866,273 - mutT OKGIIK_03950 0.66 -0.4 866,273 - mutT OKGIIK_03950 0.66 -0.1 866,350 + mutT OKGIIK_03950 0.79 -0.8 866,350 + mutT OKGIIK_03950 0.79 -0.4 866,350 + mutT OKGIIK_03950 0.79 +0.2 866,351 - mutT OKGIIK_03950 0.79 +0.3 866,351 - mutT OKGIIK_03950 0.79 +0.8 866,351 - mutT OKGIIK_03950 0.79 -0.0 866,351 - mutT OKGIIK_03950 0.79 +0.8 866,351 - mutT OKGIIK_03950 0.79 -0.7 866,351 - mutT OKGIIK_03950 0.79 +1.2 866,440 + -0.9 866,440 + +0.2 866,440 + -0.5 866,440 + -0.6 866,440 + -0.4 866,440 + -0.0 866,440 + -0.0 866,440 + -0.1 866,440 + -2.0 866,440 + +0.2 866,440 + +1.5 866,441 - -0.6 866,441 - -0.4 866,441 - -1.8 866,441 - +1.0 866,441 - +0.2 866,441 - +0.2 866,441 - -0.8 866,441 - +1.2 866,441 - +0.5 866,441 - -0.0 866,441 - +0.4 866,441 - -1.4 866,441 - -0.5 866,441 - +0.5 866,586 + OKGIIK_03955 0.14 +0.3 866,586 + OKGIIK_03955 0.14 +1.0 866,586 + OKGIIK_03955 0.14 -1.5 866,586 + OKGIIK_03955 0.14 -0.1 866,586 + OKGIIK_03955 0.14 +0.9 866,586 + OKGIIK_03955 0.14 +1.1 866,586 + OKGIIK_03955 0.14 -1.4 866,587 - OKGIIK_03955 0.14 -0.7 866,587 - OKGIIK_03955 0.14 -0.3 866,587 - OKGIIK_03955 0.14 -1.4 866,587 - OKGIIK_03955 0.14 -1.3 866,587 - OKGIIK_03955 0.14 -2.1 866,587 - OKGIIK_03955 0.14 -0.7 866,587 - OKGIIK_03955 0.14 +0.2 866,587 - OKGIIK_03955 0.14 +1.4 866,587 - OKGIIK_03955 0.14 +1.8 866,587 - OKGIIK_03955 0.14 +0.2 866,587 - OKGIIK_03955 0.14 +1.4 866,587 - OKGIIK_03955 0.14 +0.2 866,587 - OKGIIK_03955 0.14 -0.4 866,587 - OKGIIK_03955 0.14 -1.1 866,587 - OKGIIK_03955 0.14 -1.4 866,587 - OKGIIK_03955 0.14 +0.8 866,587 - OKGIIK_03955 0.14 -0.5 866,587 - OKGIIK_03955 0.14 -0.2 866,587 - OKGIIK_03955 0.14 -0.8 866,587 - OKGIIK_03955 0.14 -0.4 866,587 - OKGIIK_03955 0.14 -0.5 866,754 + OKGIIK_03955 0.34 +0.2 866,754 + OKGIIK_03955 0.34 +0.1 866,754 + OKGIIK_03955 0.34 +0.3 866,754 + OKGIIK_03955 0.34 -1.2 866,754 + OKGIIK_03955 0.34 -0.5 866,754 + OKGIIK_03955 0.34 -0.2 866,754 + OKGIIK_03955 0.34 -0.1 866,755 - OKGIIK_03955 0.34 -1.3 866,755 - OKGIIK_03955 0.34 -1.2 866,755 - OKGIIK_03955 0.34 -0.3 866,755 - OKGIIK_03955 0.34 +0.2 866,755 - OKGIIK_03955 0.34 -0.8 866,755 - OKGIIK_03955 0.34 +0.6 866,755 - OKGIIK_03955 0.34 -0.6 866,755 - OKGIIK_03955 0.34 -0.8 866,755 - OKGIIK_03955 0.34 +0.4 866,755 - OKGIIK_03955 0.34 +0.3 866,818 + OKGIIK_03955 0.41 -0.6 866,819 - OKGIIK_03955 0.41 -0.1 866,819 - OKGIIK_03955 0.41 -2.2 866,926 - OKGIIK_03955 0.54 -0.2 867,078 + OKGIIK_03955 0.72 +0.5 867,078 + OKGIIK_03955 0.72 -0.6 867,079 - OKGIIK_03955 0.72 -1.4 867,079 - OKGIIK_03955 0.72 -0.4 867,210 + OKGIIK_03955 0.87 -0.8 867,210 + OKGIIK_03955 0.87 -0.4 867,210 + OKGIIK_03955 0.87 +0.6 867,210 + OKGIIK_03955 0.87 -1.4 867,210 + OKGIIK_03955 0.87 -0.3 867,210 + OKGIIK_03955 0.87 -1.4 867,210 + OKGIIK_03955 0.87 +0.2 867,210 + OKGIIK_03955 0.87 -0.1 867,211 - OKGIIK_03955 0.87 -0.7 867,211 - OKGIIK_03955 0.87 +1.4 867,211 - OKGIIK_03955 0.87 -0.8 867,211 - OKGIIK_03955 0.87 -1.4 867,211 - OKGIIK_03955 0.87 -0.9 867,211 - OKGIIK_03955 0.87 -0.8 867,211 - OKGIIK_03955 0.87 -2.2 867,211 - OKGIIK_03955 0.87 +1.9 867,211 - OKGIIK_03955 0.87 -1.2 867,211 - OKGIIK_03955 0.87 -0.4 867,211 - OKGIIK_03955 0.87 +2.0 867,211 - OKGIIK_03955 0.87 -0.8 867,211 - OKGIIK_03955 0.87 +0.4 867,211 - OKGIIK_03955 0.87 -0.4 867,211 - OKGIIK_03955 0.87 +1.3 867,211 - OKGIIK_03955 0.87 +0.2 867,211 - OKGIIK_03955 0.87 -1.0 867,258 + -0.1 867,258 + -0.8 867,259 - -1.4 867,259 - -0.1 867,259 - -1.4 867,323 + +0.1 867,324 - +0.2 867,324 - +0.7 867,324 - -2.0 867,324 - +0.4 867,324 - +2.4 867,380 + +0.8 867,380 + +0.8 867,395 + -1.7 867,395 + -0.8 867,395 + +1.1 867,395 + +1.0 867,395 + -0.0 867,396 - -0.1 867,413 + -1.8 867,413 + +0.1 867,414 - -2.4
Or see this region's nucleotide sequence