Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fliI and fliJ overlap by 4 nucleotides fliJ and OKGIIK_02770 are separated by 64 nucleotides
OKGIIK_02760: fliI - flagellar protein export ATPase FliI, at 638,504 to 639,883
fliI
OKGIIK_02765: fliJ - flagellar export protein FliJ, at 639,880 to 640,305
fliJ
OKGIIK_02770: OKGIIK_02770 - Flg-hook domain-containing protein, at 640,370 to 641,452
_02770
Position (kb) 639
640
641 Strain fitness (log2 ratio) -2
-1
0
1 at 638.881 kb on - strand, within fliI at 639.095 kb on + strand, within fliI at 639.096 kb on - strand, within fliI at 639.096 kb on - strand, within fliI at 639.257 kb on + strand, within fliI at 639.258 kb on - strand, within fliI at 639.258 kb on - strand, within fliI at 639.258 kb on - strand, within fliI at 639.258 kb on - strand, within fliI at 639.333 kb on - strand, within fliI at 639.333 kb on - strand, within fliI at 639.393 kb on - strand, within fliI at 639.479 kb on + strand, within fliI at 639.479 kb on + strand, within fliI at 639.479 kb on + strand, within fliI at 639.479 kb on + strand, within fliI at 639.479 kb on + strand, within fliI at 639.479 kb on + strand, within fliI at 639.480 kb on - strand, within fliI at 639.480 kb on - strand, within fliI at 639.480 kb on - strand, within fliI at 639.507 kb on - strand, within fliI at 639.507 kb on - strand, within fliI at 639.556 kb on + strand, within fliI at 639.557 kb on - strand, within fliI at 639.557 kb on - strand, within fliI at 639.689 kb on + strand, within fliI at 639.689 kb on + strand, within fliI at 639.689 kb on + strand, within fliI at 639.689 kb on + strand, within fliI at 639.690 kb on - strand, within fliI at 639.690 kb on - strand, within fliI at 639.690 kb on - strand, within fliI at 639.690 kb on - strand, within fliI at 639.690 kb on - strand, within fliI at 639.690 kb on - strand, within fliI at 639.690 kb on - strand, within fliI at 639.690 kb on - strand, within fliI at 639.690 kb on - strand, within fliI at 639.698 kb on + strand, within fliI at 639.734 kb on + strand, within fliI at 640.027 kb on + strand, within fliJ at 640.027 kb on + strand, within fliJ at 640.027 kb on + strand, within fliJ at 640.027 kb on + strand, within fliJ at 640.027 kb on + strand, within fliJ at 640.027 kb on + strand, within fliJ at 640.027 kb on + strand, within fliJ at 640.027 kb on + strand, within fliJ at 640.028 kb on - strand, within fliJ at 640.028 kb on - strand, within fliJ at 640.028 kb on - strand, within fliJ at 640.028 kb on - strand, within fliJ at 640.028 kb on - strand, within fliJ at 640.518 kb on + strand, within OKGIIK_02770 at 640.518 kb on + strand, within OKGIIK_02770 at 640.518 kb on + strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770 at 640.519 kb on - strand, within OKGIIK_02770
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x remove 638,881 - fliI OKGIIK_02760 0.27 +0.6 639,095 + fliI OKGIIK_02760 0.43 -0.8 639,096 - fliI OKGIIK_02760 0.43 -1.6 639,096 - fliI OKGIIK_02760 0.43 -1.9 639,257 + fliI OKGIIK_02760 0.55 -0.3 639,258 - fliI OKGIIK_02760 0.55 -0.6 639,258 - fliI OKGIIK_02760 0.55 +0.4 639,258 - fliI OKGIIK_02760 0.55 -1.0 639,258 - fliI OKGIIK_02760 0.55 +0.5 639,333 - fliI OKGIIK_02760 0.60 -1.0 639,333 - fliI OKGIIK_02760 0.60 +0.6 639,393 - fliI OKGIIK_02760 0.64 +0.6 639,479 + fliI OKGIIK_02760 0.71 -1.4 639,479 + fliI OKGIIK_02760 0.71 -0.0 639,479 + fliI OKGIIK_02760 0.71 -1.4 639,479 + fliI OKGIIK_02760 0.71 -0.0 639,479 + fliI OKGIIK_02760 0.71 +1.0 639,479 + fliI OKGIIK_02760 0.71 -1.0 639,480 - fliI OKGIIK_02760 0.71 +0.2 639,480 - fliI OKGIIK_02760 0.71 -0.3 639,480 - fliI OKGIIK_02760 0.71 -2.7 639,507 - fliI OKGIIK_02760 0.73 -0.4 639,507 - fliI OKGIIK_02760 0.73 -1.0 639,556 + fliI OKGIIK_02760 0.76 +1.0 639,557 - fliI OKGIIK_02760 0.76 +0.1 639,557 - fliI OKGIIK_02760 0.76 -1.6 639,689 + fliI OKGIIK_02760 0.86 -0.8 639,689 + fliI OKGIIK_02760 0.86 -1.0 639,689 + fliI OKGIIK_02760 0.86 -0.7 639,689 + fliI OKGIIK_02760 0.86 +0.2 639,690 - fliI OKGIIK_02760 0.86 +0.4 639,690 - fliI OKGIIK_02760 0.86 -2.0 639,690 - fliI OKGIIK_02760 0.86 -0.8 639,690 - fliI OKGIIK_02760 0.86 +1.2 639,690 - fliI OKGIIK_02760 0.86 -0.0 639,690 - fliI OKGIIK_02760 0.86 +0.6 639,690 - fliI OKGIIK_02760 0.86 +1.0 639,690 - fliI OKGIIK_02760 0.86 -0.0 639,690 - fliI OKGIIK_02760 0.86 -1.7 639,698 + fliI OKGIIK_02760 0.87 -1.4 639,734 + fliI OKGIIK_02760 0.89 -1.0 640,027 + fliJ OKGIIK_02765 0.35 -1.4 640,027 + fliJ OKGIIK_02765 0.35 -1.0 640,027 + fliJ OKGIIK_02765 0.35 -1.4 640,027 + fliJ OKGIIK_02765 0.35 -1.4 640,027 + fliJ OKGIIK_02765 0.35 -0.0 640,027 + fliJ OKGIIK_02765 0.35 -1.4 640,027 + fliJ OKGIIK_02765 0.35 -0.7 640,027 + fliJ OKGIIK_02765 0.35 -0.0 640,028 - fliJ OKGIIK_02765 0.35 +0.2 640,028 - fliJ OKGIIK_02765 0.35 -2.2 640,028 - fliJ OKGIIK_02765 0.35 -0.0 640,028 - fliJ OKGIIK_02765 0.35 -0.2 640,028 - fliJ OKGIIK_02765 0.35 -0.6 640,518 + OKGIIK_02770 0.14 -0.5 640,518 + OKGIIK_02770 0.14 -0.6 640,518 + OKGIIK_02770 0.14 -0.4 640,519 - OKGIIK_02770 0.14 +0.2 640,519 - OKGIIK_02770 0.14 +0.2 640,519 - OKGIIK_02770 0.14 -1.0 640,519 - OKGIIK_02770 0.14 -1.4 640,519 - OKGIIK_02770 0.14 -0.0 640,519 - OKGIIK_02770 0.14 -0.0 640,519 - OKGIIK_02770 0.14 -0.3 640,519 - OKGIIK_02770 0.14 -1.5 640,519 - OKGIIK_02770 0.14 +0.5 640,519 - OKGIIK_02770 0.14 -1.4 640,519 - OKGIIK_02770 0.14 +0.1 640,519 - OKGIIK_02770 0.14 +0.6 640,519 - OKGIIK_02770 0.14 +0.4 640,519 - OKGIIK_02770 0.14 +0.2
Or see this region's nucleotide sequence