Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_02460

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntiap and OKGIIK_02460 are separated by 160 nucleotidesOKGIIK_02460 and OKGIIK_02465 are separated by 304 nucleotides OKGIIK_02455: iap - Zn-dependent amino- or carboxypeptidase, M28 family, at 582,232 to 583,854 iap OKGIIK_02460: OKGIIK_02460 - Peptidase M4, at 584,015 to 584,317 _02460 OKGIIK_02465: OKGIIK_02465 - Glycosyl transferase family 9, at 584,622 to 585,701 _02465 Position (kb) 584 585Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 583.244 kb on + strand, within iapat 583.244 kb on + strand, within iapat 583.244 kb on + strand, within iapat 583.244 kb on + strand, within iapat 583.244 kb on + strand, within iapat 583.310 kb on + strand, within iapat 583.310 kb on + strand, within iapat 583.310 kb on + strand, within iapat 583.310 kb on + strand, within iapat 583.310 kb on + strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.311 kb on - strand, within iapat 583.316 kb on + strand, within iapat 583.316 kb on + strand, within iapat 583.316 kb on + strand, within iapat 583.316 kb on + strand, within iapat 583.316 kb on + strand, within iapat 583.316 kb on + strand, within iapat 583.316 kb on + strand, within iapat 583.316 kb on + strand, within iapat 583.316 kb on + strand, within iapat 583.316 kb on + strand, within iapat 583.317 kb on - strand, within iapat 583.317 kb on - strand, within iapat 583.317 kb on - strand, within iapat 583.317 kb on - strand, within iapat 583.317 kb on - strand, within iapat 583.317 kb on - strand, within iapat 583.317 kb on - strand, within iapat 583.317 kb on - strand, within iapat 583.317 kb on - strand, within iapat 583.317 kb on - strand, within iapat 583.331 kb on + strand, within iapat 583.331 kb on + strand, within iapat 583.331 kb on + strand, within iapat 583.332 kb on - strand, within iapat 583.332 kb on - strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.334 kb on + strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.335 kb on - strand, within iapat 583.712 kb on + strandat 583.712 kb on + strandat 583.712 kb on + strandat 583.712 kb on + strandat 583.921 kb on - strandat 583.923 kb on + strandat 583.924 kb on - strandat 583.924 kb on - strandat 583.924 kb on - strandat 583.924 kb on - strandat 583.924 kb on - strandat 583.924 kb on - strandat 583.924 kb on - strandat 583.924 kb on - strandat 583.924 kb on - strandat 583.924 kb on - strandat 584.118 kb on + strand, within OKGIIK_02460at 584.364 kb on + strandat 584.364 kb on + strandat 584.379 kb on - strandat 584.389 kb on + strandat 584.389 kb on + strandat 584.389 kb on + strandat 584.389 kb on + strandat 584.389 kb on + strandat 584.389 kb on + strandat 584.390 kb on - strandat 584.390 kb on - strandat 584.390 kb on - strandat 584.390 kb on - strandat 584.390 kb on - strandat 584.460 kb on + strandat 584.461 kb on - strandat 584.461 kb on - strandat 584.461 kb on - strandat 584.471 kb on - strandat 584.471 kb on - strandat 584.484 kb on + strandat 584.485 kb on - strandat 584.485 kb on - strandat 584.485 kb on - strandat 584.487 kb on + strandat 584.487 kb on + strandat 584.487 kb on + strandat 584.487 kb on + strandat 584.487 kb on + strandat 584.487 kb on + strandat 584.487 kb on + strandat 584.487 kb on + strandat 584.487 kb on + strandat 584.487 kb on + strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.488 kb on - strandat 584.517 kb on + strandat 584.517 kb on + strandat 584.517 kb on + strandat 584.517 kb on + strandat 584.517 kb on + strandat 584.517 kb on + strandat 584.517 kb on + strandat 584.518 kb on - strandat 584.518 kb on - strandat 584.518 kb on - strandat 584.518 kb on - strandat 584.518 kb on - strandat 584.518 kb on - strandat 584.518 kb on - strandat 584.518 kb on - strandat 584.577 kb on - strandat 584.781 kb on + strand, within OKGIIK_02465at 584.940 kb on + strand, within OKGIIK_02465at 584.940 kb on + strand, within OKGIIK_02465at 584.941 kb on - strand, within OKGIIK_02465at 584.941 kb on - strand, within OKGIIK_02465at 584.941 kb on - strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.100 kb on + strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.101 kb on - strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on + strand, within OKGIIK_02465at 585.211 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.212 kb on - strand, within OKGIIK_02465at 585.259 kb on + strand, within OKGIIK_02465at 585.260 kb on - strand, within OKGIIK_02465at 585.260 kb on - strand, within OKGIIK_02465at 585.260 kb on - strand, within OKGIIK_02465at 585.260 kb on - strand, within OKGIIK_02465at 585.260 kb on - strand, within OKGIIK_02465at 585.260 kb on - strand, within OKGIIK_02465at 585.288 kb on + strand, within OKGIIK_02465at 585.288 kb on + strand, within OKGIIK_02465at 585.288 kb on + strand, within OKGIIK_02465

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
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583,244 + iap OKGIIK_02455 0.62 +0.8
583,244 + iap OKGIIK_02455 0.62 -1.8
583,244 + iap OKGIIK_02455 0.62 +1.5
583,244 + iap OKGIIK_02455 0.62 +1.1
583,244 + iap OKGIIK_02455 0.62 +0.5
583,310 + iap OKGIIK_02455 0.66 +0.7
583,310 + iap OKGIIK_02455 0.66 +1.6
583,310 + iap OKGIIK_02455 0.66 +1.0
583,310 + iap OKGIIK_02455 0.66 +0.8
583,310 + iap OKGIIK_02455 0.66 +0.5
583,311 - iap OKGIIK_02455 0.66 -0.6
583,311 - iap OKGIIK_02455 0.66 -0.0
583,311 - iap OKGIIK_02455 0.66 -0.0
583,311 - iap OKGIIK_02455 0.66 -0.2
583,311 - iap OKGIIK_02455 0.66 +0.2
583,311 - iap OKGIIK_02455 0.66 -1.4
583,311 - iap OKGIIK_02455 0.66 -1.2
583,311 - iap OKGIIK_02455 0.66 -0.8
583,311 - iap OKGIIK_02455 0.66 +0.8
583,311 - iap OKGIIK_02455 0.66 +2.0
583,311 - iap OKGIIK_02455 0.66 -0.4
583,311 - iap OKGIIK_02455 0.66 +0.6
583,316 + iap OKGIIK_02455 0.67 +0.9
583,316 + iap OKGIIK_02455 0.67 +1.0
583,316 + iap OKGIIK_02455 0.67 +1.5
583,316 + iap OKGIIK_02455 0.67 +0.2
583,316 + iap OKGIIK_02455 0.67 +0.9
583,316 + iap OKGIIK_02455 0.67 +1.0
583,316 + iap OKGIIK_02455 0.67 -0.0
583,316 + iap OKGIIK_02455 0.67 -0.6
583,316 + iap OKGIIK_02455 0.67 -0.8
583,316 + iap OKGIIK_02455 0.67 -1.0
583,317 - iap OKGIIK_02455 0.67 -0.9
583,317 - iap OKGIIK_02455 0.67 +0.2
583,317 - iap OKGIIK_02455 0.67 +0.2
583,317 - iap OKGIIK_02455 0.67 +0.7
583,317 - iap OKGIIK_02455 0.67 +0.3
583,317 - iap OKGIIK_02455 0.67 +1.2
583,317 - iap OKGIIK_02455 0.67 +0.6
583,317 - iap OKGIIK_02455 0.67 -3.2
583,317 - iap OKGIIK_02455 0.67 +1.2
583,317 - iap OKGIIK_02455 0.67 +0.9
583,331 + iap OKGIIK_02455 0.68 -1.4
583,331 + iap OKGIIK_02455 0.68 -2.0
583,331 + iap OKGIIK_02455 0.68 -0.8
583,332 - iap OKGIIK_02455 0.68 +0.6
583,332 - iap OKGIIK_02455 0.68 +0.5
583,334 + iap OKGIIK_02455 0.68 +0.3
583,334 + iap OKGIIK_02455 0.68 -1.0
583,334 + iap OKGIIK_02455 0.68 -0.8
583,334 + iap OKGIIK_02455 0.68 -0.0
583,334 + iap OKGIIK_02455 0.68 -0.2
583,334 + iap OKGIIK_02455 0.68 +0.2
583,334 + iap OKGIIK_02455 0.68 +0.5
583,334 + iap OKGIIK_02455 0.68 +0.2
583,334 + iap OKGIIK_02455 0.68 -1.2
583,334 + iap OKGIIK_02455 0.68 +1.2
583,334 + iap OKGIIK_02455 0.68 -0.2
583,334 + iap OKGIIK_02455 0.68 +0.4
583,334 + iap OKGIIK_02455 0.68 -2.0
583,334 + iap OKGIIK_02455 0.68 +0.5
583,334 + iap OKGIIK_02455 0.68 -0.9
583,334 + iap OKGIIK_02455 0.68 -0.1
583,334 + iap OKGIIK_02455 0.68 -0.4
583,334 + iap OKGIIK_02455 0.68 -1.4
583,334 + iap OKGIIK_02455 0.68 -0.1
583,334 + iap OKGIIK_02455 0.68 +0.0
583,334 + iap OKGIIK_02455 0.68 +0.7
583,334 + iap OKGIIK_02455 0.68 -1.7
583,335 - iap OKGIIK_02455 0.68 -2.1
583,335 - iap OKGIIK_02455 0.68 -0.1
583,335 - iap OKGIIK_02455 0.68 +0.0
583,335 - iap OKGIIK_02455 0.68 +0.8
583,335 - iap OKGIIK_02455 0.68 +0.0
583,335 - iap OKGIIK_02455 0.68 -0.2
583,335 - iap OKGIIK_02455 0.68 +0.2
583,335 - iap OKGIIK_02455 0.68 +0.8
583,335 - iap OKGIIK_02455 0.68 -0.8
583,335 - iap OKGIIK_02455 0.68 -2.1
583,335 - iap OKGIIK_02455 0.68 -0.2
583,335 - iap OKGIIK_02455 0.68 +1.2
583,335 - iap OKGIIK_02455 0.68 -0.7
583,335 - iap OKGIIK_02455 0.68 -0.6
583,335 - iap OKGIIK_02455 0.68 +0.1
583,335 - iap OKGIIK_02455 0.68 -0.4
583,335 - iap OKGIIK_02455 0.68 +0.2
583,335 - iap OKGIIK_02455 0.68 -1.1
583,712 + -0.1
583,712 + +1.5
583,712 + -0.4
583,712 + -0.7
583,921 - -0.6
583,923 + -0.7
583,924 - +0.6
583,924 - -0.9
583,924 - +0.1
583,924 - +0.6
583,924 - -0.4
583,924 - +0.7
583,924 - -0.1
583,924 - +0.2
583,924 - -0.7
583,924 - -1.2
584,118 + OKGIIK_02460 0.34 +1.0
584,364 + -0.6
584,364 + +0.3
584,379 - +0.8
584,389 + -0.7
584,389 + -1.1
584,389 + -1.1
584,389 + +0.3
584,389 + -0.2
584,389 + -0.0
584,390 - +0.6
584,390 - -0.0
584,390 - +0.2
584,390 - -0.8
584,390 - -0.5
584,460 + +0.1
584,461 - -1.4
584,461 - -0.4
584,461 - -1.6
584,471 - -0.2
584,471 - +1.6
584,484 + -0.9
584,485 - -0.7
584,485 - +0.2
584,485 - -1.0
584,487 + -0.8
584,487 + +0.5
584,487 + -0.5
584,487 + +0.5
584,487 + +0.1
584,487 + +0.5
584,487 + -0.3
584,487 + -0.1
584,487 + -0.9
584,487 + +0.6
584,488 - +0.4
584,488 - +0.4
584,488 - +0.5
584,488 - -0.3
584,488 - -0.6
584,488 - -0.1
584,488 - -2.2
584,488 - +0.1
584,488 - -0.4
584,488 - -0.8
584,488 - -0.5
584,488 - +0.4
584,517 + +0.6
584,517 + -0.8
584,517 + -1.0
584,517 + -1.1
584,517 + -0.9
584,517 + -1.4
584,517 + -0.1
584,518 - -0.4
584,518 - -0.3
584,518 - +0.1
584,518 - +1.3
584,518 - -1.0
584,518 - +0.5
584,518 - -1.0
584,518 - +1.0
584,577 - -0.3
584,781 + OKGIIK_02465 0.15 -0.1
584,940 + OKGIIK_02465 0.29 +0.3
584,940 + OKGIIK_02465 0.29 -0.1
584,941 - OKGIIK_02465 0.30 +0.8
584,941 - OKGIIK_02465 0.30 +0.2
584,941 - OKGIIK_02465 0.30 -0.8
585,100 + OKGIIK_02465 0.44 -1.0
585,100 + OKGIIK_02465 0.44 -0.1
585,100 + OKGIIK_02465 0.44 +0.6
585,100 + OKGIIK_02465 0.44 +0.5
585,100 + OKGIIK_02465 0.44 -1.1
585,100 + OKGIIK_02465 0.44 -0.3
585,100 + OKGIIK_02465 0.44 +0.2
585,100 + OKGIIK_02465 0.44 +0.2
585,100 + OKGIIK_02465 0.44 +0.5
585,100 + OKGIIK_02465 0.44 -0.4
585,100 + OKGIIK_02465 0.44 -0.2
585,100 + OKGIIK_02465 0.44 -1.5
585,100 + OKGIIK_02465 0.44 +0.1
585,101 - OKGIIK_02465 0.44 -0.0
585,101 - OKGIIK_02465 0.44 +0.9
585,101 - OKGIIK_02465 0.44 -2.1
585,101 - OKGIIK_02465 0.44 +0.5
585,101 - OKGIIK_02465 0.44 +0.0
585,101 - OKGIIK_02465 0.44 +0.2
585,101 - OKGIIK_02465 0.44 +0.9
585,101 - OKGIIK_02465 0.44 +0.2
585,101 - OKGIIK_02465 0.44 +0.1
585,101 - OKGIIK_02465 0.44 -0.7
585,101 - OKGIIK_02465 0.44 -1.2
585,101 - OKGIIK_02465 0.44 +0.3
585,211 + OKGIIK_02465 0.55 +1.2
585,211 + OKGIIK_02465 0.55 -0.3
585,211 + OKGIIK_02465 0.55 -0.7
585,211 + OKGIIK_02465 0.55 +1.0
585,211 + OKGIIK_02465 0.55 -0.7
585,211 + OKGIIK_02465 0.55 -1.0
585,211 + OKGIIK_02465 0.55 +0.2
585,211 + OKGIIK_02465 0.55 -0.6
585,211 + OKGIIK_02465 0.55 -0.1
585,211 + OKGIIK_02465 0.55 -0.2
585,211 + OKGIIK_02465 0.55 +0.2
585,211 + OKGIIK_02465 0.55 -0.5
585,211 + OKGIIK_02465 0.55 +1.4
585,211 - OKGIIK_02465 0.55 -1.6
585,212 - OKGIIK_02465 0.55 -1.0
585,212 - OKGIIK_02465 0.55 +0.4
585,212 - OKGIIK_02465 0.55 +0.0
585,212 - OKGIIK_02465 0.55 +0.8
585,212 - OKGIIK_02465 0.55 -0.4
585,212 - OKGIIK_02465 0.55 -0.1
585,212 - OKGIIK_02465 0.55 -0.3
585,212 - OKGIIK_02465 0.55 +1.0
585,212 - OKGIIK_02465 0.55 +1.0
585,212 - OKGIIK_02465 0.55 +0.7
585,212 - OKGIIK_02465 0.55 -1.4
585,212 - OKGIIK_02465 0.55 +0.2
585,212 - OKGIIK_02465 0.55 -0.5
585,212 - OKGIIK_02465 0.55 -0.3
585,212 - OKGIIK_02465 0.55 -1.8
585,212 - OKGIIK_02465 0.55 -0.2
585,259 + OKGIIK_02465 0.59 -0.6
585,260 - OKGIIK_02465 0.59 -0.5
585,260 - OKGIIK_02465 0.59 +1.0
585,260 - OKGIIK_02465 0.59 -0.4
585,260 - OKGIIK_02465 0.59 -1.1
585,260 - OKGIIK_02465 0.59 +1.5
585,260 - OKGIIK_02465 0.59 +0.4
585,288 + OKGIIK_02465 0.62 +0.5
585,288 + OKGIIK_02465 0.62 +0.9
585,288 + OKGIIK_02465 0.62 -0.6

Or see this region's nucleotide sequence