Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF995 and GFF996 are separated by 11 nucleotides GFF996 and GFF997 are separated by 24 nucleotides GFF997 and GFF998 are separated by 295 nucleotides
GFF995 - Acetyl-CoA acetyltransferase, at 334,202 to 335,383
GFF995
GFF996 - putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B, at 335,395 to 336,060
GFF996
GFF997 - putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A, at 336,085 to 336,783
GFF997
GFF998 - HTH-type transcriptional regulator CynR, at 337,079 to 338,029
GFF998
Position (kb) 336
337 Strain fitness (log2 ratio) -2
-1
0
1 at 335.304 kb on - strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.312 kb on + strand at 335.313 kb on - strand at 335.313 kb on - strand at 335.313 kb on - strand at 335.313 kb on - strand at 335.313 kb on - strand at 335.313 kb on - strand at 335.313 kb on - strand at 335.313 kb on - strand at 335.422 kb on + strand at 335.423 kb on - strand at 335.957 kb on + strand, within GFF996 at 335.957 kb on + strand, within GFF996 at 335.957 kb on + strand, within GFF996 at 335.958 kb on - strand, within GFF996 at 335.958 kb on - strand, within GFF996 at 335.958 kb on - strand, within GFF996 at 335.958 kb on - strand, within GFF996 at 335.958 kb on - strand, within GFF996 at 335.999 kb on + strand at 336.000 kb on - strand at 336.000 kb on - strand at 336.000 kb on - strand at 336.000 kb on - strand at 336.003 kb on - strand at 336.003 kb on - strand at 336.051 kb on + strand at 336.075 kb on + strand at 336.086 kb on + strand at 336.086 kb on + strand at 336.149 kb on + strand at 336.149 kb on + strand at 336.149 kb on + strand at 336.150 kb on - strand at 336.150 kb on - strand at 336.150 kb on - strand at 336.354 kb on - strand, within GFF997 at 336.546 kb on - strand, within GFF997 at 336.752 kb on + strand at 336.753 kb on - strand at 336.758 kb on + strand at 336.758 kb on + strand at 336.758 kb on + strand at 336.759 kb on - strand at 336.759 kb on - strand at 336.759 kb on - strand at 336.783 kb on + strand at 336.783 kb on + strand at 336.783 kb on + strand at 336.784 kb on - strand at 336.796 kb on + strand at 336.796 kb on + strand at 336.799 kb on + strand at 336.800 kb on - strand at 336.800 kb on - strand at 336.800 kb on - strand at 336.852 kb on - strand at 337.559 kb on + strand, within GFF998 at 337.560 kb on - strand, within GFF998 at 337.560 kb on - strand, within GFF998
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 335,304 - +0.7 335,312 + -0.4 335,312 + +0.4 335,312 + -0.8 335,312 + +0.6 335,312 + +0.3 335,312 + -0.4 335,312 + -0.1 335,312 + +1.1 335,312 + +0.6 335,312 + -1.1 335,312 + -0.0 335,312 + -0.9 335,313 - +0.2 335,313 - -0.1 335,313 - -0.9 335,313 - +0.8 335,313 - +0.6 335,313 - +0.3 335,313 - -0.4 335,313 - -0.6 335,422 + +0.4 335,423 - -1.2 335,957 + GFF996 0.84 -0.5 335,957 + GFF996 0.84 -1.8 335,957 + GFF996 0.84 -0.2 335,958 - GFF996 0.85 +0.2 335,958 - GFF996 0.85 -0.6 335,958 - GFF996 0.85 +0.3 335,958 - GFF996 0.85 +0.1 335,958 - GFF996 0.85 +0.7 335,999 + -0.2 336,000 - +0.2 336,000 - +0.2 336,000 - +0.6 336,000 - -0.2 336,003 - -0.1 336,003 - +1.0 336,051 + +0.6 336,075 + -0.7 336,086 + +0.3 336,086 + +0.2 336,149 + +0.3 336,149 + -0.5 336,149 + +0.6 336,150 - +1.7 336,150 - -2.2 336,150 - -0.3 336,354 - GFF997 0.38 +1.2 336,546 - GFF997 0.66 -0.4 336,752 + +0.5 336,753 - -0.1 336,758 + +1.2 336,758 + -0.5 336,758 + +0.2 336,759 - +0.0 336,759 - -0.0 336,759 - +0.2 336,783 + +0.2 336,783 + -1.3 336,783 + +0.2 336,784 - +0.2 336,796 + -0.6 336,796 + +0.5 336,799 + +0.8 336,800 - -0.9 336,800 - +1.1 336,800 - -0.5 336,852 - -0.1 337,559 + GFF998 0.50 +0.6 337,560 - GFF998 0.51 +0.6 337,560 - GFF998 0.51 -0.4
Or see this region's nucleotide sequence