Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF982 and GFF983 are separated by 208 nucleotides GFF983 and GFF984 are separated by 356 nucleotides GFF984 and GFF985 are separated by 132 nucleotides
GFF982 - putative diguanylate cyclase DgcC, at 320,816 to 321,889
GFF982
GFF983 - Carboxypeptidase G2, at 322,098 to 323,336
GFF983
GFF984 - hypothetical protein, at 323,693 to 323,995
GFF984
GFF985 - Oxaloacetate decarboxylase, at 324,128 to 324,997
GFF985
Position (kb) 322
323
324 Strain fitness (log2 ratio) -1
0
1 at 321.189 kb on + strand, within GFF982 at 321.260 kb on + strand, within GFF982 at 321.260 kb on + strand, within GFF982 at 321.260 kb on + strand, within GFF982 at 321.260 kb on + strand, within GFF982 at 321.261 kb on - strand, within GFF982 at 321.261 kb on - strand, within GFF982 at 321.261 kb on - strand, within GFF982 at 321.261 kb on - strand, within GFF982 at 321.261 kb on - strand, within GFF982 at 321.261 kb on - strand, within GFF982 at 321.287 kb on + strand, within GFF982 at 321.288 kb on - strand, within GFF982 at 321.512 kb on + strand, within GFF982 at 321.513 kb on - strand, within GFF982 at 321.513 kb on - strand, within GFF982 at 321.513 kb on - strand, within GFF982 at 321.698 kb on + strand, within GFF982 at 321.806 kb on + strand at 321.807 kb on - strand at 321.903 kb on - strand at 321.903 kb on - strand at 321.947 kb on + strand at 321.954 kb on - strand at 322.000 kb on + strand at 322.000 kb on + strand at 322.001 kb on - strand at 322.001 kb on - strand at 322.015 kb on - strand at 322.036 kb on + strand at 322.037 kb on - strand at 322.165 kb on + strand at 322.187 kb on + strand at 322.216 kb on - strand at 322.275 kb on + strand, within GFF983 at 323.197 kb on + strand, within GFF983 at 323.240 kb on + strand at 323.260 kb on - strand at 323.292 kb on + strand at 323.292 kb on + strand at 323.293 kb on - strand at 323.456 kb on + strand at 323.507 kb on + strand at 323.612 kb on + strand at 323.613 kb on - strand at 323.613 kb on - strand at 323.614 kb on + strand at 323.631 kb on + strand at 323.632 kb on - strand at 323.661 kb on - strand at 323.706 kb on + strand at 323.735 kb on + strand, within GFF984 at 323.735 kb on + strand, within GFF984 at 323.735 kb on + strand, within GFF984 at 323.855 kb on - strand, within GFF984 at 323.978 kb on + strand at 323.978 kb on + strand at 323.979 kb on - strand at 324.063 kb on - strand at 324.147 kb on + strand at 324.147 kb on + strand at 324.148 kb on - strand at 324.168 kb on + strand at 324.169 kb on - strand at 324.186 kb on + strand at 324.186 kb on + strand at 324.186 kb on + strand at 324.186 kb on + strand at 324.186 kb on + strand at 324.186 kb on + strand at 324.187 kb on - strand at 324.187 kb on - strand at 324.187 kb on - strand at 324.187 kb on - strand at 324.187 kb on - strand at 324.187 kb on - strand at 324.187 kb on - strand at 324.187 kb on - strand at 324.261 kb on + strand, within GFF985 at 324.262 kb on - strand, within GFF985
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 321,189 + GFF982 0.35 +0.2 321,260 + GFF982 0.41 +0.9 321,260 + GFF982 0.41 +0.0 321,260 + GFF982 0.41 -1.3 321,260 + GFF982 0.41 -0.6 321,261 - GFF982 0.41 -0.9 321,261 - GFF982 0.41 +0.5 321,261 - GFF982 0.41 -0.0 321,261 - GFF982 0.41 -0.5 321,261 - GFF982 0.41 +0.2 321,261 - GFF982 0.41 +0.8 321,287 + GFF982 0.44 -0.3 321,288 - GFF982 0.44 +0.2 321,512 + GFF982 0.65 -0.5 321,513 - GFF982 0.65 +0.2 321,513 - GFF982 0.65 -0.8 321,513 - GFF982 0.65 +0.7 321,698 + GFF982 0.82 +0.2 321,806 + +0.7 321,807 - -0.1 321,903 - -0.1 321,903 - +0.3 321,947 + -0.1 321,954 - +0.3 322,000 + +0.7 322,000 + -0.3 322,001 - -0.0 322,001 - +0.6 322,015 - +0.6 322,036 + +0.5 322,037 - -0.5 322,165 + +0.4 322,187 + -0.9 322,216 - +0.4 322,275 + GFF983 0.14 +0.6 323,197 + GFF983 0.89 +0.3 323,240 + +0.5 323,260 - -0.0 323,292 + -0.3 323,292 + +0.2 323,293 - +0.9 323,456 + -0.2 323,507 + -0.2 323,612 + -0.1 323,613 - +0.2 323,613 - -0.5 323,614 + -0.9 323,631 + +0.4 323,632 - -0.3 323,661 - +1.5 323,706 + -0.8 323,735 + GFF984 0.14 -0.2 323,735 + GFF984 0.14 +0.2 323,735 + GFF984 0.14 -0.8 323,855 - GFF984 0.53 -0.8 323,978 + -0.9 323,978 + -1.1 323,979 - +0.5 324,063 - -1.3 324,147 + -0.1 324,147 + +1.1 324,148 - +0.0 324,168 + -0.3 324,169 - +1.2 324,186 + +0.4 324,186 + +0.9 324,186 + +0.9 324,186 + -1.1 324,186 + -0.2 324,186 + +0.7 324,187 - +0.7 324,187 - +0.5 324,187 - +0.1 324,187 - +0.9 324,187 - -0.3 324,187 - +0.0 324,187 - -0.5 324,187 - -0.9 324,261 + GFF985 0.15 +0.7 324,262 - GFF985 0.15 -0.4
Or see this region's nucleotide sequence