Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF964 and GFF965 are separated by 114 nucleotides GFF965 and GFF966 overlap by 4 nucleotides
GFF964 - hypothetical protein, at 298,104 to 299,801
GFF964
GFF965 - HTH-type transcriptional activator RhaR, at 299,916 to 300,935
GFF965
GFF966 - HTH-type transcriptional regulator HdfR, at 300,932 to 301,876
GFF966
Position (kb) 299
300
301 Strain fitness (log2 ratio) -1
0
1 at 298.980 kb on + strand, within GFF964 at 298.980 kb on + strand, within GFF964 at 298.981 kb on - strand, within GFF964 at 299.403 kb on + strand, within GFF964 at 299.403 kb on + strand, within GFF964 at 299.404 kb on - strand, within GFF964 at 299.404 kb on - strand, within GFF964 at 299.404 kb on - strand, within GFF964 at 299.404 kb on - strand, within GFF964 at 299.583 kb on + strand, within GFF964 at 299.584 kb on - strand, within GFF964 at 299.619 kb on + strand, within GFF964 at 299.619 kb on + strand, within GFF964 at 299.620 kb on - strand, within GFF964 at 299.644 kb on + strand at 299.644 kb on + strand at 299.645 kb on - strand at 299.645 kb on - strand at 299.647 kb on - strand at 299.647 kb on - strand at 299.647 kb on - strand at 299.647 kb on - strand at 299.694 kb on + strand at 299.738 kb on + strand at 299.738 kb on + strand at 299.738 kb on + strand at 299.738 kb on + strand at 299.738 kb on + strand at 299.739 kb on - strand at 299.739 kb on - strand at 299.739 kb on - strand at 300.158 kb on + strand, within GFF965 at 300.158 kb on + strand, within GFF965 at 300.159 kb on - strand, within GFF965 at 300.159 kb on - strand, within GFF965 at 300.334 kb on + strand, within GFF965 at 300.496 kb on + strand, within GFF965 at 300.497 kb on - strand, within GFF965 at 300.610 kb on + strand, within GFF965 at 300.611 kb on - strand, within GFF965 at 300.664 kb on + strand, within GFF965 at 300.665 kb on - strand, within GFF965 at 300.665 kb on - strand, within GFF965 at 300.665 kb on - strand, within GFF965 at 301.624 kb on - strand, within GFF966
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 298,980 + GFF964 0.52 -0.1 298,980 + GFF964 0.52 +0.1 298,981 - GFF964 0.52 +0.7 299,403 + GFF964 0.77 -0.3 299,403 + GFF964 0.77 +1.0 299,404 - GFF964 0.77 -1.1 299,404 - GFF964 0.77 -0.9 299,404 - GFF964 0.77 +0.1 299,404 - GFF964 0.77 -0.1 299,583 + GFF964 0.87 -1.1 299,584 - GFF964 0.87 +0.6 299,619 + GFF964 0.89 -1.5 299,619 + GFF964 0.89 +0.8 299,620 - GFF964 0.89 -0.5 299,644 + -0.3 299,644 + -0.0 299,645 - +0.3 299,645 - -1.1 299,647 - -0.2 299,647 - -0.3 299,647 - -0.5 299,647 - +0.3 299,694 + -1.5 299,738 + -0.9 299,738 + +0.4 299,738 + -1.0 299,738 + -0.5 299,738 + +1.1 299,739 - -0.3 299,739 - -1.1 299,739 - +0.2 300,158 + GFF965 0.24 +0.5 300,158 + GFF965 0.24 +1.3 300,159 - GFF965 0.24 +0.6 300,159 - GFF965 0.24 -1.1 300,334 + GFF965 0.41 +0.6 300,496 + GFF965 0.57 +0.4 300,497 - GFF965 0.57 +0.4 300,610 + GFF965 0.68 +1.2 300,611 - GFF965 0.68 +1.0 300,664 + GFF965 0.73 +0.3 300,665 - GFF965 0.73 +0.2 300,665 - GFF965 0.73 +0.0 300,665 - GFF965 0.73 -1.0 301,624 - GFF966 0.73 -0.5
Or see this region's nucleotide sequence