Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF836 and GFF837 are separated by 1 nucleotides GFF837 and GFF838 overlap by 14 nucleotides GFF838 and GFF839 overlap by 4 nucleotides GFF839 and GFF840 overlap by 8 nucleotides GFF840 and GFF841 overlap by 4 nucleotides
GFF836 - hypothetical protein, at 185,837 to 186,640
GFF836
GFF837 - hypothetical protein, at 186,642 to 187,613
GFF837
GFF838 - hypothetical protein, at 187,600 to 188,397
GFF838
GFF839 - hypothetical protein, at 188,394 to 188,852
GFF839
GFF840 - hypothetical protein, at 188,845 to 189,315
GFF840
GFF841 - hypothetical protein, at 189,312 to 189,917
GFF841
Position (kb) 187
188
189 Strain fitness (log2 ratio) -1
0
1 at 186.641 kb on + strand at 186.641 kb on + strand at 186.843 kb on + strand, within GFF837 at 187.013 kb on + strand, within GFF837 at 187.266 kb on + strand, within GFF837 at 187.267 kb on - strand, within GFF837 at 187.267 kb on - strand, within GFF837 at 187.291 kb on - strand, within GFF837 at 187.366 kb on + strand, within GFF837 at 187.366 kb on + strand, within GFF837 at 187.366 kb on + strand, within GFF837 at 187.366 kb on + strand, within GFF837 at 187.367 kb on - strand, within GFF837 at 187.367 kb on - strand, within GFF837 at 187.367 kb on - strand, within GFF837 at 187.464 kb on + strand, within GFF837 at 187.464 kb on + strand, within GFF837 at 187.465 kb on - strand, within GFF837 at 187.465 kb on - strand, within GFF837 at 187.605 kb on + strand at 187.605 kb on + strand at 187.606 kb on - strand at 187.993 kb on + strand, within GFF838 at 188.137 kb on + strand, within GFF838 at 188.138 kb on - strand, within GFF838 at 188.138 kb on - strand, within GFF838 at 188.190 kb on - strand, within GFF838 at 188.399 kb on + strand at 188.665 kb on + strand, within GFF839 at 188.695 kb on + strand, within GFF839 at 188.695 kb on + strand, within GFF839 at 188.695 kb on + strand, within GFF839 at 188.696 kb on - strand, within GFF839 at 188.696 kb on - strand, within GFF839 at 188.696 kb on - strand, within GFF839 at 188.714 kb on + strand, within GFF839 at 188.727 kb on - strand, within GFF839 at 188.999 kb on - strand, within GFF840 at 189.238 kb on + strand, within GFF840 at 189.238 kb on + strand, within GFF840 at 189.239 kb on - strand, within GFF840 at 189.239 kb on - strand, within GFF840 at 189.280 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 186,641 + -0.7 186,641 + -0.3 186,843 + GFF837 0.21 -0.3 187,013 + GFF837 0.38 -0.1 187,266 + GFF837 0.64 +1.5 187,267 - GFF837 0.64 -0.5 187,267 - GFF837 0.64 +0.4 187,291 - GFF837 0.67 -0.7 187,366 + GFF837 0.74 +0.0 187,366 + GFF837 0.74 -0.7 187,366 + GFF837 0.74 -1.5 187,366 + GFF837 0.74 +0.8 187,367 - GFF837 0.75 -0.2 187,367 - GFF837 0.75 -0.3 187,367 - GFF837 0.75 -0.8 187,464 + GFF837 0.85 -0.4 187,464 + GFF837 0.85 +0.3 187,465 - GFF837 0.85 -0.2 187,465 - GFF837 0.85 -0.9 187,605 + -0.4 187,605 + -0.3 187,606 - +1.0 187,993 + GFF838 0.49 -0.7 188,137 + GFF838 0.67 +0.8 188,138 - GFF838 0.67 +0.5 188,138 - GFF838 0.67 +1.0 188,190 - GFF838 0.74 -0.1 188,399 + +0.0 188,665 + GFF839 0.59 -0.8 188,695 + GFF839 0.66 -1.7 188,695 + GFF839 0.66 +0.1 188,695 + GFF839 0.66 -0.9 188,696 - GFF839 0.66 -0.2 188,696 - GFF839 0.66 -0.6 188,696 - GFF839 0.66 +0.3 188,714 + GFF839 0.70 -0.2 188,727 - GFF839 0.73 +0.5 188,999 - GFF840 0.33 +0.0 189,238 + GFF840 0.83 -0.2 189,238 + GFF840 0.83 +0.7 189,239 - GFF840 0.84 -1.6 189,239 - GFF840 0.84 -1.0 189,280 + -1.2
Or see this region's nucleotide sequence