Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF709 and GFF710 are separated by 152 nucleotides GFF710 and GFF711 are separated by 75 nucleotides GFF711 and GFF712 are separated by 154 nucleotides
GFF709 - Acyl-CoA dehydrogenase, at 26,970 to 28,118
GFF709
GFF710 - Adenine phosphoribosyltransferase, at 28,271 to 28,819
GFF710
GFF711 - Transcriptional activator protein Anr, at 28,895 to 29,629
GFF711
GFF712 - hypothetical protein, at 29,784 to 30,266
GFF712
Position (kb) 28
29 Strain fitness (log2 ratio) -1
0
1
2 at 27.478 kb on - strand, within GFF709 at 27.518 kb on + strand, within GFF709 at 28.005 kb on + strand at 28.005 kb on + strand at 28.005 kb on + strand at 28.005 kb on + strand at 28.005 kb on + strand at 28.006 kb on - strand at 28.036 kb on - strand at 28.116 kb on + strand at 28.116 kb on + strand at 28.261 kb on + strand at 28.262 kb on - strand at 28.272 kb on + strand at 28.272 kb on + strand at 28.277 kb on - strand at 28.282 kb on + strand at 28.282 kb on + strand at 28.283 kb on - strand at 28.322 kb on - strand at 28.530 kb on + strand, within GFF710 at 28.561 kb on + strand, within GFF710 at 28.562 kb on - strand, within GFF710 at 28.562 kb on - strand, within GFF710 at 28.562 kb on - strand, within GFF710 at 28.577 kb on + strand, within GFF710 at 28.603 kb on - strand, within GFF710 at 28.610 kb on + strand, within GFF710 at 28.674 kb on + strand, within GFF710 at 28.674 kb on + strand, within GFF710 at 28.675 kb on - strand, within GFF710 at 28.853 kb on + strand at 28.853 kb on + strand at 28.853 kb on + strand at 28.854 kb on - strand at 28.854 kb on - strand at 28.854 kb on - strand at 28.854 kb on - strand at 28.855 kb on + strand at 28.855 kb on + strand at 29.037 kb on + strand, within GFF711 at 29.038 kb on - strand, within GFF711 at 29.038 kb on - strand, within GFF711 at 29.131 kb on + strand, within GFF711 at 29.506 kb on + strand, within GFF711 at 29.658 kb on + strand at 29.659 kb on - strand at 29.659 kb on - strand at 29.659 kb on - strand at 29.659 kb on - strand at 29.716 kb on + strand at 29.717 kb on - strand at 29.717 kb on - strand at 29.717 kb on - strand at 29.717 kb on - strand at 29.724 kb on + strand at 29.724 kb on + strand at 29.725 kb on - strand at 29.725 kb on - strand at 29.725 kb on - strand at 29.725 kb on - strand at 29.725 kb on - strand at 29.725 kb on - strand at 29.725 kb on - strand at 29.762 kb on + strand at 29.763 kb on - strand at 29.763 kb on - strand at 29.763 kb on - strand at 29.803 kb on + strand at 29.813 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 27,478 - GFF709 0.44 -0.5 27,518 + GFF709 0.48 -0.1 28,005 + +1.7 28,005 + -0.3 28,005 + +0.3 28,005 + -0.1 28,005 + -0.3 28,006 - +0.1 28,036 - -0.6 28,116 + -0.1 28,116 + +0.7 28,261 + -0.1 28,262 - -0.6 28,272 + +0.8 28,272 + -0.5 28,277 - +0.4 28,282 + -0.3 28,282 + -0.7 28,283 - -0.2 28,322 - +0.5 28,530 + GFF710 0.47 +1.1 28,561 + GFF710 0.53 +0.7 28,562 - GFF710 0.53 +0.7 28,562 - GFF710 0.53 +1.8 28,562 - GFF710 0.53 -1.4 28,577 + GFF710 0.56 -0.3 28,603 - GFF710 0.60 -0.1 28,610 + GFF710 0.62 -0.1 28,674 + GFF710 0.73 +0.4 28,674 + GFF710 0.73 -0.1 28,675 - GFF710 0.74 +0.3 28,853 + -1.1 28,853 + +0.3 28,853 + -0.3 28,854 - +0.7 28,854 - -0.1 28,854 - -0.4 28,854 - -0.2 28,855 + +0.9 28,855 + +1.3 29,037 + GFF711 0.19 +0.6 29,038 - GFF711 0.19 +1.0 29,038 - GFF711 0.19 -0.7 29,131 + GFF711 0.32 +1.1 29,506 + GFF711 0.83 -1.1 29,658 + -0.6 29,659 - +0.9 29,659 - +0.1 29,659 - -0.3 29,659 - +0.8 29,716 + -1.4 29,717 - -0.9 29,717 - -0.3 29,717 - +0.1 29,717 - -0.6 29,724 + -1.1 29,724 + -0.2 29,725 - -1.1 29,725 - -0.4 29,725 - -0.8 29,725 - -0.2 29,725 - -0.7 29,725 - -0.4 29,725 - +0.4 29,762 + -0.7 29,763 - +0.2 29,763 - -1.2 29,763 - +0.7 29,803 + +0.5 29,813 + -0.0
Or see this region's nucleotide sequence