Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF626 and GFF627 are separated by 14 nucleotides GFF627 and GFF628 are separated by 199 nucleotides GFF628 and GFF629 are separated by 30 nucleotides GFF629 and GFF630 are separated by 224 nucleotides
GFF626 - hypothetical protein, at 697,562 to 698,440
GFF626
GFF627 - Thiol:disulfide interchange protein DsbA, at 698,455 to 699,096
GFF627
GFF628 - Cytochrome c4, at 699,296 to 699,907
GFF628
GFF629 - Cytochrome c5, at 699,938 to 700,210
GFF629
GFF630 - putative GTP-binding protein EngB, at 700,435 to 701,079
GFF630
Position (kb) 699
700 Strain fitness (log2 ratio) -2
-1
0
1
2 at 698.369 kb on - strand at 698.456 kb on + strand at 698.456 kb on + strand at 698.456 kb on + strand at 698.457 kb on - strand at 698.457 kb on - strand at 698.457 kb on - strand at 698.457 kb on - strand at 698.457 kb on - strand at 698.457 kb on - strand at 698.563 kb on - strand, within GFF627 at 699.008 kb on + strand, within GFF627 at 699.009 kb on - strand, within GFF627 at 699.171 kb on - strand at 699.171 kb on - strand at 699.171 kb on - strand at 699.171 kb on - strand at 699.171 kb on - strand at 699.171 kb on - strand at 699.171 kb on - strand at 699.171 kb on - strand at 699.176 kb on - strand at 699.219 kb on + strand at 699.219 kb on + strand at 699.219 kb on + strand at 699.221 kb on + strand at 699.222 kb on - strand at 699.222 kb on - strand at 699.222 kb on - strand at 699.222 kb on - strand at 699.238 kb on + strand at 699.238 kb on + strand at 699.238 kb on + strand at 699.441 kb on + strand, within GFF628 at 699.441 kb on + strand, within GFF628 at 699.441 kb on + strand, within GFF628 at 699.442 kb on - strand, within GFF628 at 699.442 kb on - strand, within GFF628 at 699.442 kb on - strand, within GFF628 at 699.442 kb on - strand, within GFF628 at 699.442 kb on - strand, within GFF628 at 699.624 kb on + strand, within GFF628 at 699.624 kb on + strand, within GFF628 at 699.625 kb on - strand, within GFF628 at 699.733 kb on - strand, within GFF628 at 699.733 kb on - strand, within GFF628 at 699.912 kb on + strand at 699.913 kb on - strand at 699.922 kb on - strand at 699.922 kb on - strand at 699.922 kb on - strand at 699.922 kb on - strand at 699.922 kb on - strand at 699.928 kb on - strand at 699.935 kb on - strand at 699.935 kb on - strand at 699.935 kb on - strand at 699.940 kb on - strand at 699.940 kb on - strand at 699.953 kb on - strand at 699.953 kb on - strand at 699.984 kb on + strand, within GFF629 at 699.985 kb on - strand, within GFF629 at 700.127 kb on + strand, within GFF629 at 700.127 kb on + strand, within GFF629 at 700.128 kb on - strand, within GFF629 at 700.128 kb on - strand, within GFF629 at 700.128 kb on - strand, within GFF629 at 700.164 kb on + strand, within GFF629 at 700.164 kb on + strand, within GFF629 at 700.165 kb on - strand, within GFF629 at 700.186 kb on + strand at 700.187 kb on - strand at 700.200 kb on + strand at 700.201 kb on - strand at 700.201 kb on - strand at 700.244 kb on - strand at 700.281 kb on + strand at 700.281 kb on + strand at 700.281 kb on + strand at 700.282 kb on - strand at 700.282 kb on - strand at 700.282 kb on - strand at 700.358 kb on + strand at 700.358 kb on + strand at 700.358 kb on + strand at 700.358 kb on + strand at 700.358 kb on + strand at 700.359 kb on - strand at 700.359 kb on - strand at 700.359 kb on - strand at 700.359 kb on - strand at 700.359 kb on - strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.360 kb on + strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.361 kb on - strand at 700.362 kb on + strand at 700.362 kb on + strand at 700.362 kb on + strand at 700.362 kb on + strand at 700.362 kb on + strand at 700.362 kb on + strand at 700.362 kb on + strand at 700.363 kb on - strand at 700.363 kb on - strand at 700.363 kb on - strand at 700.363 kb on - strand at 700.363 kb on - strand at 700.363 kb on - strand at 700.363 kb on - strand at 700.363 kb on - strand at 700.363 kb on - strand at 700.363 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 698,369 - -0.3 698,456 + +0.4 698,456 + -0.2 698,456 + -0.3 698,457 - -0.2 698,457 - +0.4 698,457 - +0.6 698,457 - +0.3 698,457 - +0.8 698,457 - -0.2 698,563 - GFF627 0.17 -0.7 699,008 + GFF627 0.86 +1.2 699,009 - GFF627 0.86 -0.4 699,171 - +0.5 699,171 - +0.1 699,171 - -0.3 699,171 - +0.3 699,171 - +0.1 699,171 - -0.1 699,171 - -0.3 699,171 - +0.8 699,176 - -0.9 699,219 + -0.4 699,219 + -1.1 699,219 + +0.0 699,221 + +0.9 699,222 - -0.1 699,222 - +0.3 699,222 - -0.6 699,222 - +0.3 699,238 + -0.2 699,238 + +0.2 699,238 + -0.5 699,441 + GFF628 0.24 +1.2 699,441 + GFF628 0.24 +1.6 699,441 + GFF628 0.24 +1.2 699,442 - GFF628 0.24 +0.4 699,442 - GFF628 0.24 +1.6 699,442 - GFF628 0.24 +0.6 699,442 - GFF628 0.24 -0.4 699,442 - GFF628 0.24 -0.2 699,624 + GFF628 0.54 +0.4 699,624 + GFF628 0.54 +0.9 699,625 - GFF628 0.54 +0.4 699,733 - GFF628 0.71 +0.7 699,733 - GFF628 0.71 -0.4 699,912 + +1.4 699,913 - +0.4 699,922 - -1.7 699,922 - -1.0 699,922 - +1.3 699,922 - +0.6 699,922 - -0.2 699,928 - -0.3 699,935 - +0.6 699,935 - +0.3 699,935 - +0.2 699,940 - +0.7 699,940 - +0.9 699,953 - -0.3 699,953 - +0.4 699,984 + GFF629 0.17 -0.1 699,985 - GFF629 0.17 -0.6 700,127 + GFF629 0.69 -2.1 700,127 + GFF629 0.69 +1.0 700,128 - GFF629 0.70 -0.4 700,128 - GFF629 0.70 +0.0 700,128 - GFF629 0.70 +1.6 700,164 + GFF629 0.83 +0.1 700,164 + GFF629 0.83 +0.0 700,165 - GFF629 0.83 +0.6 700,186 + -0.9 700,187 - -0.8 700,200 + +1.2 700,201 - -0.3 700,201 - -0.7 700,244 - -0.4 700,281 + +1.9 700,281 + -0.7 700,281 + -0.4 700,282 - -1.3 700,282 - +0.3 700,282 - -0.0 700,358 + -0.4 700,358 + +0.3 700,358 + -0.7 700,358 + +0.7 700,358 + +1.6 700,359 - +0.3 700,359 - +0.5 700,359 - -1.5 700,359 - +0.2 700,359 - +0.5 700,360 + -0.7 700,360 + -0.6 700,360 + +0.3 700,360 + -0.5 700,360 + -0.4 700,360 + +0.5 700,360 + -0.7 700,360 + +0.3 700,360 + -0.6 700,360 + +0.0 700,360 + +0.0 700,360 + +0.5 700,360 + -0.2 700,360 + -0.7 700,361 - -0.1 700,361 - +0.0 700,361 - -1.0 700,361 - -0.4 700,361 - +0.6 700,361 - -0.5 700,361 - -1.3 700,361 - -0.7 700,361 - -0.5 700,361 - +0.4 700,361 - +0.7 700,361 - -0.9 700,361 - +0.3 700,361 - -1.0 700,362 + -0.6 700,362 + +0.2 700,362 + -0.3 700,362 + +0.5 700,362 + -0.9 700,362 + -0.3 700,362 + -0.4 700,363 - -0.5 700,363 - -0.5 700,363 - -0.8 700,363 - -0.7 700,363 - -1.0 700,363 - +0.3 700,363 - -2.3 700,363 - -0.2 700,363 - -0.4 700,363 - +2.4
Or see this region's nucleotide sequence