Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5151 and GFF5152 overlap by 4 nucleotides GFF5152 and GFF5153 are separated by 220 nucleotides
GFF5151 - Glucokinase, at 24,222 to 25,181
GFF5151
GFF5152 - Phosphogluconate dehydratase, at 25,178 to 27,004
GFF5152
GFF5153 - Glyceraldehyde-3-phosphate dehydrogenase 1, at 27,225 to 28,226
GFF5153
Position (kb) 25
26
27
28 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 24.223 kb on + strand at 24.224 kb on - strand at 24.313 kb on + strand at 24.313 kb on + strand at 24.314 kb on - strand at 24.314 kb on - strand at 24.646 kb on + strand, within GFF5151 at 24.646 kb on + strand, within GFF5151 at 24.646 kb on + strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 25.048 kb on + strand, within GFF5151 at 25.049 kb on - strand, within GFF5151 at 25.049 kb on - strand, within GFF5151 at 25.049 kb on - strand, within GFF5151 at 25.049 kb on - strand, within GFF5151 at 25.183 kb on + strand at 25.184 kb on - strand at 25.416 kb on + strand, within GFF5152 at 25.416 kb on + strand, within GFF5152 at 25.416 kb on + strand, within GFF5152 at 25.416 kb on + strand, within GFF5152 at 25.416 kb on + strand, within GFF5152 at 25.416 kb on + strand, within GFF5152 at 25.416 kb on + strand, within GFF5152 at 25.416 kb on + strand, within GFF5152 at 25.416 kb on + strand, within GFF5152 at 25.863 kb on + strand, within GFF5152 at 25.863 kb on + strand, within GFF5152 at 25.863 kb on + strand, within GFF5152 at 25.863 kb on + strand, within GFF5152 at 25.863 kb on + strand, within GFF5152 at 25.864 kb on - strand, within GFF5152 at 26.335 kb on - strand, within GFF5152 at 26.335 kb on - strand, within GFF5152 at 26.362 kb on - strand, within GFF5152 at 26.362 kb on - strand, within GFF5152 at 26.415 kb on + strand, within GFF5152 at 26.416 kb on - strand, within GFF5152 at 26.754 kb on + strand, within GFF5152 at 26.754 kb on + strand, within GFF5152 at 26.782 kb on + strand, within GFF5152 at 26.783 kb on + strand, within GFF5152 at 26.783 kb on - strand, within GFF5152 at 26.784 kb on + strand, within GFF5152 at 26.784 kb on + strand, within GFF5152 at 26.785 kb on - strand, within GFF5152 at 26.785 kb on - strand, within GFF5152 at 26.785 kb on - strand, within GFF5152 at 26.937 kb on + strand at 26.937 kb on + strand at 26.938 kb on - strand at 26.938 kb on - strand at 26.938 kb on - strand at 26.938 kb on - strand at 27.008 kb on + strand at 27.008 kb on + strand at 27.008 kb on + strand at 27.008 kb on + strand at 27.008 kb on + strand at 27.008 kb on + strand at 27.009 kb on - strand at 27.009 kb on - strand at 27.009 kb on - strand at 27.009 kb on - strand at 27.009 kb on - strand at 27.009 kb on - strand at 27.009 kb on - strand at 27.046 kb on + strand at 27.047 kb on - strand at 27.047 kb on - strand at 27.047 kb on - strand at 27.047 kb on - strand at 27.128 kb on + strand at 27.132 kb on + strand at 27.133 kb on - strand at 27.133 kb on - strand at 27.182 kb on + strand at 27.183 kb on - strand at 27.269 kb on + strand at 27.269 kb on + strand at 27.288 kb on + strand at 27.288 kb on + strand at 27.288 kb on + strand at 27.289 kb on - strand at 27.289 kb on - strand at 27.289 kb on - strand at 27.289 kb on - strand at 27.289 kb on - strand at 27.290 kb on + strand at 27.290 kb on + strand at 27.290 kb on + strand at 27.291 kb on - strand at 27.291 kb on - strand at 27.372 kb on + strand, within GFF5153 at 27.372 kb on + strand, within GFF5153 at 27.373 kb on - strand, within GFF5153 at 27.373 kb on - strand, within GFF5153 at 27.373 kb on - strand, within GFF5153 at 27.508 kb on + strand, within GFF5153 at 27.508 kb on + strand, within GFF5153 at 27.508 kb on + strand, within GFF5153 at 27.509 kb on - strand, within GFF5153 at 27.509 kb on - strand, within GFF5153 at 27.560 kb on + strand, within GFF5153 at 27.627 kb on + strand, within GFF5153 at 27.772 kb on - strand, within GFF5153 at 27.801 kb on + strand, within GFF5153 at 27.816 kb on + strand, within GFF5153 at 27.817 kb on - strand, within GFF5153
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 24,223 + +0.2 24,224 - -0.9 24,313 + +0.0 24,313 + -1.1 24,314 - -0.9 24,314 - -0.8 24,646 + GFF5151 0.44 -0.0 24,646 + GFF5151 0.44 -1.7 24,646 + GFF5151 0.44 +1.1 24,647 - GFF5151 0.44 -0.6 24,647 - GFF5151 0.44 +0.1 24,647 - GFF5151 0.44 -0.9 24,647 - GFF5151 0.44 -0.7 24,647 - GFF5151 0.44 -0.2 24,647 - GFF5151 0.44 -0.9 25,048 + GFF5151 0.86 +0.6 25,049 - GFF5151 0.86 -0.8 25,049 - GFF5151 0.86 -0.2 25,049 - GFF5151 0.86 -0.9 25,049 - GFF5151 0.86 -0.2 25,183 + +0.0 25,184 - -0.5 25,416 + GFF5152 0.13 -1.1 25,416 + GFF5152 0.13 -1.8 25,416 + GFF5152 0.13 -2.4 25,416 + GFF5152 0.13 -0.4 25,416 + GFF5152 0.13 -1.4 25,416 + GFF5152 0.13 -0.2 25,416 + GFF5152 0.13 -2.6 25,416 + GFF5152 0.13 -2.0 25,416 + GFF5152 0.13 -0.9 25,863 + GFF5152 0.37 -1.1 25,863 + GFF5152 0.37 -0.5 25,863 + GFF5152 0.37 -3.6 25,863 + GFF5152 0.37 -1.4 25,863 + GFF5152 0.37 -0.9 25,864 - GFF5152 0.38 -0.4 26,335 - GFF5152 0.63 -0.9 26,335 - GFF5152 0.63 -3.0 26,362 - GFF5152 0.65 -2.6 26,362 - GFF5152 0.65 -0.8 26,415 + GFF5152 0.68 -0.6 26,416 - GFF5152 0.68 -1.2 26,754 + GFF5152 0.86 +1.0 26,754 + GFF5152 0.86 -2.3 26,782 + GFF5152 0.88 -1.8 26,783 + GFF5152 0.88 -1.1 26,783 - GFF5152 0.88 -1.6 26,784 + GFF5152 0.88 -2.4 26,784 + GFF5152 0.88 -1.9 26,785 - GFF5152 0.88 -4.2 26,785 - GFF5152 0.88 -1.6 26,785 - GFF5152 0.88 -2.3 26,937 + -0.4 26,937 + -1.1 26,938 - -0.2 26,938 - -2.6 26,938 - -1.1 26,938 - -1.6 27,008 + -1.5 27,008 + -2.4 27,008 + -1.9 27,008 + -0.3 27,008 + -0.6 27,008 + -1.7 27,009 - -1.4 27,009 - +0.1 27,009 - -1.5 27,009 - -2.9 27,009 - -0.8 27,009 - -0.7 27,009 - -1.9 27,046 + -1.5 27,047 - -0.6 27,047 - -2.0 27,047 - -0.1 27,047 - -0.9 27,128 + -0.6 27,132 + -0.4 27,133 - -0.3 27,133 - +0.2 27,182 + +0.0 27,183 - +0.6 27,269 + -1.7 27,269 + +1.4 27,288 + -0.3 27,288 + +0.1 27,288 + -0.1 27,289 - +0.8 27,289 - -0.8 27,289 - +0.2 27,289 - -0.6 27,289 - +0.1 27,290 + +0.2 27,290 + -0.3 27,290 + +1.1 27,291 - -1.1 27,291 - -0.4 27,372 + GFF5153 0.15 +0.7 27,372 + GFF5153 0.15 +0.1 27,373 - GFF5153 0.15 +1.3 27,373 - GFF5153 0.15 +0.0 27,373 - GFF5153 0.15 -0.0 27,508 + GFF5153 0.28 +1.4 27,508 + GFF5153 0.28 -1.3 27,508 + GFF5153 0.28 +0.2 27,509 - GFF5153 0.28 +0.9 27,509 - GFF5153 0.28 -0.1 27,560 + GFF5153 0.33 +2.6 27,627 + GFF5153 0.40 +1.4 27,772 - GFF5153 0.55 -0.4 27,801 + GFF5153 0.57 -1.3 27,816 + GFF5153 0.59 -0.1 27,817 - GFF5153 0.59 +0.0
Or see this region's nucleotide sequence