Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4863 and GFF4864 overlap by 26 nucleotides GFF4864 and GFF4865 are separated by 388 nucleotides GFF4865 and GFF4866 are separated by 256 nucleotides
GFF4863 - hypothetical protein, at 134,187 to 134,366
GFF4863
GFF4864 - Ribose 1,5-bisphosphate phosphokinase PhnN, at 134,341 to 134,910
GFF4864
GFF4865 - hypothetical protein, at 135,299 to 135,625
GFF4865
GFF4866 - Magnesium transporter MgtE, at 135,882 to 137,324
GFF4866
Position (kb) 135
136 Strain fitness (log2 ratio) -2
-1
0
1 at 134.582 kb on + strand, within GFF4864 at 134.583 kb on - strand, within GFF4864 at 134.583 kb on - strand, within GFF4864 at 134.629 kb on + strand, within GFF4864 at 134.629 kb on + strand, within GFF4864 at 134.679 kb on - strand, within GFF4864 at 134.793 kb on + strand, within GFF4864 at 134.809 kb on + strand, within GFF4864 at 134.809 kb on + strand, within GFF4864 at 134.809 kb on + strand, within GFF4864 at 134.810 kb on - strand, within GFF4864 at 134.810 kb on - strand, within GFF4864 at 134.810 kb on - strand, within GFF4864 at 134.810 kb on - strand, within GFF4864 at 134.810 kb on - strand, within GFF4864 at 134.946 kb on - strand at 134.971 kb on + strand at 134.971 kb on + strand at 134.971 kb on + strand at 134.972 kb on - strand at 134.972 kb on - strand at 134.977 kb on + strand at 134.977 kb on + strand at 134.978 kb on - strand at 134.978 kb on - strand at 134.978 kb on - strand at 134.978 kb on - strand at 134.978 kb on - strand at 134.990 kb on + strand at 135.002 kb on + strand at 135.002 kb on + strand at 135.002 kb on + strand at 135.003 kb on - strand at 135.003 kb on - strand at 135.003 kb on - strand at 135.039 kb on + strand at 135.063 kb on + strand at 135.121 kb on + strand at 135.122 kb on - strand at 135.142 kb on - strand at 135.240 kb on + strand at 135.297 kb on - strand at 135.297 kb on - strand at 135.298 kb on + strand at 135.298 kb on + strand at 135.299 kb on - strand at 135.299 kb on - strand at 135.354 kb on + strand, within GFF4865 at 135.355 kb on - strand, within GFF4865 at 135.355 kb on - strand, within GFF4865 at 135.454 kb on + strand, within GFF4865 at 135.455 kb on - strand, within GFF4865 at 135.516 kb on + strand, within GFF4865 at 135.517 kb on - strand, within GFF4865 at 135.517 kb on - strand, within GFF4865 at 135.628 kb on + strand at 135.639 kb on + strand at 135.639 kb on + strand at 135.639 kb on + strand at 135.640 kb on - strand at 135.640 kb on - strand at 135.680 kb on + strand at 135.681 kb on - strand at 135.681 kb on - strand at 135.723 kb on + strand at 135.724 kb on - strand at 135.724 kb on - strand at 135.786 kb on + strand at 135.805 kb on + strand at 135.805 kb on + strand at 135.805 kb on + strand at 135.805 kb on + strand at 135.806 kb on - strand at 135.806 kb on - strand at 135.811 kb on + strand at 135.811 kb on + strand at 135.811 kb on + strand at 135.812 kb on - strand at 135.812 kb on - strand at 135.823 kb on + strand at 135.823 kb on + strand at 135.823 kb on + strand at 135.823 kb on + strand at 135.824 kb on - strand at 135.824 kb on - strand at 135.824 kb on - strand at 135.824 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 134,582 + GFF4864 0.42 +0.6 134,583 - GFF4864 0.42 -1.2 134,583 - GFF4864 0.42 -1.7 134,629 + GFF4864 0.51 -1.2 134,629 + GFF4864 0.51 -0.8 134,679 - GFF4864 0.59 -0.0 134,793 + GFF4864 0.79 +1.4 134,809 + GFF4864 0.82 -1.1 134,809 + GFF4864 0.82 -0.7 134,809 + GFF4864 0.82 +0.8 134,810 - GFF4864 0.82 -1.1 134,810 - GFF4864 0.82 -1.4 134,810 - GFF4864 0.82 -0.3 134,810 - GFF4864 0.82 +0.2 134,810 - GFF4864 0.82 +0.0 134,946 - -0.4 134,971 + +0.0 134,971 + +0.1 134,971 + +0.4 134,972 - -1.3 134,972 - -0.3 134,977 + -0.3 134,977 + +0.3 134,978 - -0.1 134,978 - +0.3 134,978 - +0.0 134,978 - -0.7 134,978 - +0.5 134,990 + -1.0 135,002 + +0.8 135,002 + +1.1 135,002 + +0.5 135,003 - -0.3 135,003 - -1.3 135,003 - +0.6 135,039 + -0.1 135,063 + +0.3 135,121 + +0.3 135,122 - +0.2 135,142 - +0.3 135,240 + +1.1 135,297 - +1.0 135,297 - -0.1 135,298 + +1.4 135,298 + -0.2 135,299 - +0.2 135,299 - +1.4 135,354 + GFF4865 0.17 +0.5 135,355 - GFF4865 0.17 +0.4 135,355 - GFF4865 0.17 +0.7 135,454 + GFF4865 0.47 +0.8 135,455 - GFF4865 0.48 +0.7 135,516 + GFF4865 0.66 -0.2 135,517 - GFF4865 0.67 +0.0 135,517 - GFF4865 0.67 -0.4 135,628 + -0.2 135,639 + -0.3 135,639 + -0.7 135,639 + -0.5 135,640 - +0.5 135,640 - -0.2 135,680 + -0.2 135,681 - -0.6 135,681 - +0.6 135,723 + +0.6 135,724 - +0.8 135,724 - -2.4 135,786 + -0.5 135,805 + -0.1 135,805 + -0.5 135,805 + -0.6 135,805 + +0.4 135,806 - -0.6 135,806 - -0.3 135,811 + +0.2 135,811 + +0.0 135,811 + -1.6 135,812 - -1.0 135,812 - +1.7 135,823 + -0.7 135,823 + -1.2 135,823 + -0.3 135,823 + -0.8 135,824 - -0.5 135,824 - -0.4 135,824 - -0.2 135,824 - -1.7
Or see this region's nucleotide sequence