Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4847 and GFF4848 are separated by 31 nucleotides GFF4848 and GFF4849 are separated by 15 nucleotides GFF4849 and GFF4850 are separated by 3 nucleotides GFF4850 and GFF4851 are separated by 370 nucleotides
GFF4847 - Flagellar hook protein FlgE, at 115,746 to 117,074
GFF4847
GFF4848 - Basal-body rod modification protein FlgD, at 117,106 to 117,834
GFF4848
GFF4849 - Flagellar basal-body rod protein FlgC, at 117,850 to 118,293
GFF4849
GFF4850 - Flagellar basal body rod protein FlgB, at 118,297 to 118,707
GFF4850
GFF4851 - Chemotaxis protein methyltransferase Cher2, at 119,078 to 119,905
GFF4851
Position (kb) 117
118
119 Strain fitness (log2 ratio) -2
-1
0
1
2 at 116.899 kb on - strand, within GFF4847 at 116.947 kb on + strand at 116.947 kb on + strand at 117.043 kb on + strand at 117.043 kb on + strand at 117.044 kb on - strand at 117.044 kb on - strand at 117.065 kb on + strand at 117.107 kb on + strand at 117.107 kb on + strand at 117.107 kb on + strand at 117.107 kb on + strand at 117.108 kb on - strand at 117.108 kb on - strand at 117.108 kb on - strand at 117.108 kb on - strand at 117.108 kb on - strand at 117.108 kb on - strand at 117.108 kb on - strand at 117.108 kb on - strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.109 kb on + strand at 117.110 kb on - strand at 117.110 kb on - strand at 117.110 kb on - strand at 117.110 kb on - strand at 117.110 kb on - strand at 117.110 kb on - strand at 117.110 kb on - strand at 117.111 kb on + strand at 117.111 kb on + strand at 117.111 kb on + strand at 117.111 kb on + strand at 117.111 kb on + strand at 117.111 kb on + strand at 117.112 kb on - strand at 117.112 kb on - strand at 117.112 kb on - strand at 117.112 kb on - strand at 117.112 kb on - strand at 117.112 kb on - strand at 117.112 kb on - strand at 117.112 kb on - strand at 117.112 kb on - strand at 117.112 kb on - strand at 117.125 kb on - strand at 117.221 kb on + strand, within GFF4848 at 117.221 kb on + strand, within GFF4848 at 117.221 kb on + strand, within GFF4848 at 117.222 kb on - strand, within GFF4848 at 117.222 kb on - strand, within GFF4848 at 117.222 kb on - strand, within GFF4848 at 117.275 kb on + strand, within GFF4848 at 117.275 kb on + strand, within GFF4848 at 117.275 kb on + strand, within GFF4848 at 117.275 kb on + strand, within GFF4848 at 117.275 kb on + strand, within GFF4848 at 117.275 kb on + strand, within GFF4848 at 117.275 kb on + strand, within GFF4848 at 117.275 kb on + strand, within GFF4848 at 117.276 kb on - strand, within GFF4848 at 117.276 kb on - strand, within GFF4848 at 117.276 kb on - strand, within GFF4848 at 117.276 kb on - strand, within GFF4848 at 117.276 kb on - strand, within GFF4848 at 117.542 kb on + strand, within GFF4848 at 117.542 kb on + strand, within GFF4848 at 117.542 kb on + strand, within GFF4848 at 117.542 kb on + strand, within GFF4848 at 117.542 kb on + strand, within GFF4848 at 117.543 kb on - strand, within GFF4848 at 117.543 kb on - strand, within GFF4848 at 117.543 kb on - strand, within GFF4848 at 117.579 kb on + strand, within GFF4848 at 117.579 kb on + strand, within GFF4848 at 117.580 kb on - strand, within GFF4848 at 117.580 kb on - strand, within GFF4848 at 117.756 kb on + strand, within GFF4848 at 117.757 kb on - strand, within GFF4848 at 117.757 kb on - strand, within GFF4848 at 117.757 kb on - strand, within GFF4848 at 117.848 kb on + strand at 117.851 kb on + strand at 117.851 kb on + strand at 117.852 kb on - strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.869 kb on - strand at 117.980 kb on + strand, within GFF4849 at 117.981 kb on - strand, within GFF4849 at 117.981 kb on - strand, within GFF4849 at 117.986 kb on + strand, within GFF4849 at 117.986 kb on + strand, within GFF4849 at 117.986 kb on + strand, within GFF4849 at 117.987 kb on - strand, within GFF4849 at 117.987 kb on - strand, within GFF4849 at 117.987 kb on - strand, within GFF4849 at 118.170 kb on - strand, within GFF4849 at 118.298 kb on + strand at 118.299 kb on - strand at 118.385 kb on + strand, within GFF4850 at 118.451 kb on + strand, within GFF4850 at 118.451 kb on + strand, within GFF4850 at 118.451 kb on + strand, within GFF4850 at 118.451 kb on + strand, within GFF4850 at 118.452 kb on - strand, within GFF4850 at 118.595 kb on + strand, within GFF4850 at 118.595 kb on + strand, within GFF4850 at 118.595 kb on + strand, within GFF4850 at 118.596 kb on - strand, within GFF4850 at 118.596 kb on - strand, within GFF4850 at 118.596 kb on - strand, within GFF4850 at 118.596 kb on - strand, within GFF4850 at 118.950 kb on - strand at 119.014 kb on - strand at 119.014 kb on - strand at 119.014 kb on - strand at 119.025 kb on - strand at 119.091 kb on + strand at 119.091 kb on + strand at 119.091 kb on + strand at 119.091 kb on + strand at 119.092 kb on - strand at 119.092 kb on - strand at 119.092 kb on - strand at 119.092 kb on - strand at 119.092 kb on - strand at 119.092 kb on - strand at 119.092 kb on - strand at 119.092 kb on - strand at 119.124 kb on + strand at 119.173 kb on - strand, within GFF4851 at 119.238 kb on + strand, within GFF4851 at 119.238 kb on + strand, within GFF4851 at 119.238 kb on + strand, within GFF4851 at 119.238 kb on + strand, within GFF4851 at 119.239 kb on - strand, within GFF4851 at 119.239 kb on - strand, within GFF4851 at 119.239 kb on - strand, within GFF4851 at 119.239 kb on - strand, within GFF4851 at 119.289 kb on + strand, within GFF4851 at 119.289 kb on + strand, within GFF4851 at 119.289 kb on + strand, within GFF4851 at 119.289 kb on + strand, within GFF4851 at 119.290 kb on - strand, within GFF4851 at 119.290 kb on - strand, within GFF4851 at 119.290 kb on - strand, within GFF4851 at 119.290 kb on - strand, within GFF4851 at 119.290 kb on - strand, within GFF4851 at 119.290 kb on - strand, within GFF4851 at 119.290 kb on - strand, within GFF4851
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 116,899 - GFF4847 0.87 +0.5 116,947 + -0.8 116,947 + +1.0 117,043 + +0.3 117,043 + +1.4 117,044 - +0.7 117,044 - +0.4 117,065 + +0.1 117,107 + +0.2 117,107 + +1.1 117,107 + +0.1 117,107 + -0.2 117,108 - -0.6 117,108 - +0.2 117,108 - +0.8 117,108 - +0.4 117,108 - -1.3 117,108 - -0.0 117,108 - +0.5 117,108 - -0.8 117,109 + +1.9 117,109 + -0.4 117,109 + +0.0 117,109 + +1.4 117,109 + +0.7 117,109 + +1.2 117,109 + +0.5 117,109 + +0.1 117,109 + +0.2 117,109 + +1.0 117,109 + -0.1 117,109 + +0.6 117,109 + +0.3 117,109 + +0.2 117,110 - -0.2 117,110 - -1.4 117,110 - -1.6 117,110 - +0.1 117,110 - +0.2 117,110 - -0.1 117,110 - +0.4 117,111 + +0.3 117,111 + -0.0 117,111 + -0.4 117,111 + +1.9 117,111 + +0.3 117,111 + -0.3 117,112 - +0.3 117,112 - +0.4 117,112 - -0.8 117,112 - +0.7 117,112 - +0.1 117,112 - -0.2 117,112 - +0.2 117,112 - -1.4 117,112 - +0.1 117,112 - -0.8 117,125 - +0.7 117,221 + GFF4848 0.16 +0.7 117,221 + GFF4848 0.16 +0.5 117,221 + GFF4848 0.16 +0.7 117,222 - GFF4848 0.16 +0.1 117,222 - GFF4848 0.16 +0.4 117,222 - GFF4848 0.16 -0.4 117,275 + GFF4848 0.23 -0.3 117,275 + GFF4848 0.23 +0.3 117,275 + GFF4848 0.23 +0.8 117,275 + GFF4848 0.23 -0.0 117,275 + GFF4848 0.23 +0.8 117,275 + GFF4848 0.23 +0.8 117,275 + GFF4848 0.23 +1.9 117,275 + GFF4848 0.23 +0.6 117,276 - GFF4848 0.23 -0.3 117,276 - GFF4848 0.23 +0.4 117,276 - GFF4848 0.23 -0.1 117,276 - GFF4848 0.23 -0.6 117,276 - GFF4848 0.23 +0.6 117,542 + GFF4848 0.60 +0.4 117,542 + GFF4848 0.60 -0.9 117,542 + GFF4848 0.60 +0.7 117,542 + GFF4848 0.60 +0.6 117,542 + GFF4848 0.60 +0.9 117,543 - GFF4848 0.60 +0.5 117,543 - GFF4848 0.60 +0.3 117,543 - GFF4848 0.60 +0.8 117,579 + GFF4848 0.65 -0.2 117,579 + GFF4848 0.65 +0.1 117,580 - GFF4848 0.65 +0.1 117,580 - GFF4848 0.65 -0.7 117,756 + GFF4848 0.89 +0.2 117,757 - GFF4848 0.89 +0.4 117,757 - GFF4848 0.89 +0.2 117,757 - GFF4848 0.89 +0.5 117,848 + +0.4 117,851 + +1.6 117,851 + +0.2 117,852 - +0.3 117,868 + +0.8 117,868 + +0.1 117,868 + +0.3 117,869 - +1.1 117,980 + GFF4849 0.29 +1.2 117,981 - GFF4849 0.30 +1.4 117,981 - GFF4849 0.30 +0.3 117,986 + GFF4849 0.31 +1.0 117,986 + GFF4849 0.31 +1.6 117,986 + GFF4849 0.31 +0.5 117,987 - GFF4849 0.31 +1.2 117,987 - GFF4849 0.31 +0.2 117,987 - GFF4849 0.31 +1.5 118,170 - GFF4849 0.72 -1.3 118,298 + +1.5 118,299 - +0.2 118,385 + GFF4850 0.21 -0.2 118,451 + GFF4850 0.37 +0.1 118,451 + GFF4850 0.37 +1.3 118,451 + GFF4850 0.37 +0.2 118,451 + GFF4850 0.37 -0.1 118,452 - GFF4850 0.38 +1.4 118,595 + GFF4850 0.73 +0.2 118,595 + GFF4850 0.73 +0.7 118,595 + GFF4850 0.73 -0.2 118,596 - GFF4850 0.73 +0.9 118,596 - GFF4850 0.73 +0.6 118,596 - GFF4850 0.73 -1.1 118,596 - GFF4850 0.73 +0.5 118,950 - -0.4 119,014 - -0.7 119,014 - -1.7 119,014 - +0.8 119,025 - +1.0 119,091 + -0.2 119,091 + -1.3 119,091 + -0.1 119,091 + +0.7 119,092 - +0.1 119,092 - +0.1 119,092 - +1.0 119,092 - -0.9 119,092 - -2.1 119,092 - -1.6 119,092 - -0.2 119,092 - +0.7 119,124 + -0.2 119,173 - GFF4851 0.11 +0.1 119,238 + GFF4851 0.19 -1.7 119,238 + GFF4851 0.19 +0.6 119,238 + GFF4851 0.19 -1.0 119,238 + GFF4851 0.19 -0.1 119,239 - GFF4851 0.19 -0.8 119,239 - GFF4851 0.19 -0.1 119,239 - GFF4851 0.19 -0.2 119,239 - GFF4851 0.19 -0.6 119,289 + GFF4851 0.25 -0.9 119,289 + GFF4851 0.25 +0.3 119,289 + GFF4851 0.25 +0.2 119,289 + GFF4851 0.25 +0.1 119,290 - GFF4851 0.26 +1.0 119,290 - GFF4851 0.26 -0.4 119,290 - GFF4851 0.26 +0.6 119,290 - GFF4851 0.26 +0.7 119,290 - GFF4851 0.26 +0.3 119,290 - GFF4851 0.26 -0.2 119,290 - GFF4851 0.26 -1.1
Or see this region's nucleotide sequence