Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4794 and GFF4795 are separated by 190 nucleotides GFF4795 and GFF4796 are separated by 14 nucleotides GFF4796 and GFF4797 are separated by 103 nucleotides
GFF4794 - Histidinol-phosphate aminotransferase, at 56,338 to 57,738
GFF4794
GFF4795 - 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase, at 57,929 to 58,690
GFF4795
GFF4796 - hypothetical protein, at 58,705 to 58,824
GFF4796
GFF4797 - Putative NADP-dependent oxidoreductase YfmJ, at 58,928 to 59,932
GFF4797
Position (kb) 58
59 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 57.775 kb on + strand at 57.775 kb on + strand at 57.883 kb on + strand at 57.883 kb on + strand at 57.884 kb on - strand at 57.919 kb on - strand at 58.002 kb on + strand at 58.002 kb on + strand at 58.002 kb on + strand at 58.003 kb on - strand at 58.095 kb on + strand, within GFF4795 at 58.221 kb on + strand, within GFF4795 at 58.221 kb on + strand, within GFF4795 at 58.221 kb on + strand, within GFF4795 at 58.222 kb on - strand, within GFF4795 at 58.314 kb on + strand, within GFF4795 at 58.315 kb on - strand, within GFF4795 at 58.378 kb on + strand, within GFF4795 at 58.432 kb on - strand, within GFF4795 at 58.432 kb on - strand, within GFF4795 at 58.432 kb on - strand, within GFF4795 at 58.432 kb on - strand, within GFF4795 at 58.446 kb on + strand, within GFF4795 at 58.446 kb on + strand, within GFF4795 at 58.446 kb on + strand, within GFF4795 at 58.446 kb on + strand, within GFF4795 at 58.447 kb on - strand, within GFF4795 at 58.447 kb on - strand, within GFF4795 at 58.447 kb on - strand, within GFF4795 at 58.447 kb on - strand, within GFF4795 at 58.450 kb on + strand, within GFF4795 at 58.451 kb on - strand, within GFF4795 at 58.451 kb on - strand, within GFF4795 at 58.534 kb on + strand, within GFF4795 at 58.658 kb on + strand at 58.659 kb on - strand at 58.659 kb on - strand at 58.659 kb on - strand at 58.659 kb on - strand at 58.771 kb on - strand, within GFF4796 at 58.771 kb on - strand, within GFF4796 at 58.786 kb on - strand, within GFF4796 at 58.893 kb on + strand at 58.893 kb on + strand at 58.893 kb on + strand at 59.003 kb on + strand at 59.003 kb on + strand at 59.003 kb on + strand at 59.004 kb on - strand at 59.004 kb on - strand at 59.013 kb on + strand at 59.060 kb on + strand, within GFF4797 at 59.060 kb on + strand, within GFF4797 at 59.060 kb on + strand, within GFF4797 at 59.060 kb on + strand, within GFF4797 at 59.111 kb on + strand, within GFF4797 at 59.111 kb on + strand, within GFF4797 at 59.111 kb on + strand, within GFF4797 at 59.111 kb on + strand, within GFF4797 at 59.112 kb on - strand, within GFF4797 at 59.112 kb on - strand, within GFF4797 at 59.204 kb on + strand, within GFF4797 at 59.204 kb on + strand, within GFF4797 at 59.205 kb on - strand, within GFF4797 at 59.205 kb on - strand, within GFF4797 at 59.234 kb on + strand, within GFF4797 at 59.234 kb on + strand, within GFF4797 at 59.262 kb on - strand, within GFF4797 at 59.297 kb on + strand, within GFF4797 at 59.297 kb on + strand, within GFF4797 at 59.297 kb on + strand, within GFF4797 at 59.298 kb on - strand, within GFF4797 at 59.298 kb on - strand, within GFF4797 at 59.298 kb on - strand, within GFF4797 at 59.298 kb on - strand, within GFF4797 at 59.298 kb on - strand, within GFF4797 at 59.301 kb on + strand, within GFF4797 at 59.301 kb on + strand, within GFF4797 at 59.301 kb on + strand, within GFF4797 at 59.302 kb on - strand, within GFF4797 at 59.302 kb on - strand, within GFF4797 at 59.302 kb on - strand, within GFF4797 at 59.302 kb on - strand, within GFF4797 at 59.302 kb on - strand, within GFF4797 at 59.334 kb on - strand, within GFF4797 at 59.525 kb on + strand, within GFF4797 at 59.526 kb on - strand, within GFF4797 at 59.526 kb on - strand, within GFF4797 at 59.586 kb on - strand, within GFF4797 at 59.586 kb on - strand, within GFF4797 at 59.586 kb on - strand, within GFF4797 at 59.678 kb on + strand, within GFF4797 at 59.678 kb on + strand, within GFF4797 at 59.678 kb on + strand, within GFF4797 at 59.686 kb on + strand, within GFF4797 at 59.687 kb on - strand, within GFF4797 at 59.687 kb on - strand, within GFF4797 at 59.714 kb on + strand, within GFF4797 at 59.714 kb on + strand, within GFF4797 at 59.768 kb on + strand, within GFF4797 at 59.769 kb on - strand, within GFF4797
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 57,775 + -0.4 57,775 + +0.1 57,883 + +1.0 57,883 + -0.1 57,884 - -0.6 57,919 - +0.2 58,002 + -0.9 58,002 + +1.1 58,002 + +1.0 58,003 - -0.4 58,095 + GFF4795 0.22 +0.5 58,221 + GFF4795 0.38 +0.8 58,221 + GFF4795 0.38 +0.5 58,221 + GFF4795 0.38 -0.9 58,222 - GFF4795 0.38 -0.7 58,314 + GFF4795 0.51 +0.3 58,315 - GFF4795 0.51 -0.2 58,378 + GFF4795 0.59 -1.0 58,432 - GFF4795 0.66 +0.1 58,432 - GFF4795 0.66 -0.9 58,432 - GFF4795 0.66 -0.6 58,432 - GFF4795 0.66 +0.5 58,446 + GFF4795 0.68 +2.1 58,446 + GFF4795 0.68 +0.4 58,446 + GFF4795 0.68 +0.2 58,446 + GFF4795 0.68 +0.4 58,447 - GFF4795 0.68 +0.3 58,447 - GFF4795 0.68 -0.9 58,447 - GFF4795 0.68 -1.6 58,447 - GFF4795 0.68 +2.0 58,450 + GFF4795 0.68 -0.9 58,451 - GFF4795 0.69 -0.4 58,451 - GFF4795 0.69 +1.3 58,534 + GFF4795 0.79 -1.0 58,658 + -0.6 58,659 - -0.1 58,659 - +0.1 58,659 - -0.2 58,659 - -0.6 58,771 - GFF4796 0.55 +1.6 58,771 - GFF4796 0.55 -0.1 58,786 - GFF4796 0.68 +0.4 58,893 + -0.7 58,893 + +0.6 58,893 + -0.6 59,003 + -0.2 59,003 + -0.2 59,003 + -0.0 59,004 - -0.5 59,004 - -0.9 59,013 + +0.5 59,060 + GFF4797 0.13 -1.9 59,060 + GFF4797 0.13 -0.4 59,060 + GFF4797 0.13 +0.5 59,060 + GFF4797 0.13 -1.2 59,111 + GFF4797 0.18 +1.4 59,111 + GFF4797 0.18 -0.6 59,111 + GFF4797 0.18 +1.4 59,111 + GFF4797 0.18 +0.6 59,112 - GFF4797 0.18 -0.1 59,112 - GFF4797 0.18 +0.3 59,204 + GFF4797 0.27 +0.4 59,204 + GFF4797 0.27 -0.4 59,205 - GFF4797 0.28 +0.2 59,205 - GFF4797 0.28 +0.8 59,234 + GFF4797 0.30 -0.6 59,234 + GFF4797 0.30 -0.7 59,262 - GFF4797 0.33 +1.0 59,297 + GFF4797 0.37 -0.3 59,297 + GFF4797 0.37 +0.4 59,297 + GFF4797 0.37 -1.1 59,298 - GFF4797 0.37 -0.4 59,298 - GFF4797 0.37 +0.6 59,298 - GFF4797 0.37 -0.4 59,298 - GFF4797 0.37 -0.9 59,298 - GFF4797 0.37 -1.5 59,301 + GFF4797 0.37 -0.9 59,301 + GFF4797 0.37 +0.8 59,301 + GFF4797 0.37 +0.1 59,302 - GFF4797 0.37 -0.2 59,302 - GFF4797 0.37 -1.1 59,302 - GFF4797 0.37 -0.4 59,302 - GFF4797 0.37 -0.1 59,302 - GFF4797 0.37 -0.0 59,334 - GFF4797 0.40 -0.1 59,525 + GFF4797 0.59 -0.6 59,526 - GFF4797 0.60 -2.9 59,526 - GFF4797 0.60 +0.3 59,586 - GFF4797 0.65 +0.2 59,586 - GFF4797 0.65 -0.1 59,586 - GFF4797 0.65 +0.5 59,678 + GFF4797 0.75 +0.5 59,678 + GFF4797 0.75 -0.4 59,678 + GFF4797 0.75 +0.1 59,686 + GFF4797 0.75 +1.0 59,687 - GFF4797 0.76 -0.3 59,687 - GFF4797 0.76 -0.1 59,714 + GFF4797 0.78 +0.2 59,714 + GFF4797 0.78 -0.7 59,768 + GFF4797 0.84 -0.3 59,769 - GFF4797 0.84 +0.4
Or see this region's nucleotide sequence