Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF468 and GFF469 are separated by 117 nucleotides GFF469 and GFF470 are separated by 151 nucleotides GFF470 and GFF471 are separated by 69 nucleotides
GFF468 - 4-hydroxybenzoate octaprenyltransferase, at 514,756 to 515,646
GFF468
GFF469 - hypothetical protein, at 515,764 to 516,147
GFF469
GFF470 - Phosphate regulon transcriptional regulatory protein PhoB, at 516,299 to 516,988
GFF470
GFF471 - Phosphate regulon sensor protein PhoR, at 517,058 to 518,413
GFF471
Position (kb) 515
516
517 Strain fitness (log2 ratio) -1
0
1 at 515.708 kb on - strand at 515.765 kb on + strand at 515.765 kb on + strand at 515.849 kb on + strand, within GFF469 at 515.849 kb on + strand, within GFF469 at 515.867 kb on + strand, within GFF469 at 515.868 kb on - strand, within GFF469 at 515.902 kb on + strand, within GFF469 at 515.903 kb on - strand, within GFF469 at 516.014 kb on + strand, within GFF469 at 516.015 kb on - strand, within GFF469 at 516.041 kb on + strand, within GFF469 at 516.041 kb on + strand, within GFF469 at 516.041 kb on + strand, within GFF469 at 516.041 kb on + strand, within GFF469 at 516.042 kb on - strand, within GFF469 at 516.042 kb on - strand, within GFF469 at 516.042 kb on - strand, within GFF469 at 516.042 kb on - strand, within GFF469 at 516.183 kb on + strand at 516.190 kb on + strand at 516.226 kb on + strand at 516.227 kb on - strand at 516.227 kb on - strand at 516.246 kb on - strand at 516.246 kb on - strand at 516.258 kb on + strand at 516.258 kb on + strand at 516.258 kb on + strand at 516.258 kb on + strand at 516.258 kb on + strand at 516.258 kb on + strand at 516.258 kb on + strand at 516.259 kb on - strand at 516.259 kb on - strand at 516.259 kb on - strand at 516.259 kb on - strand at 516.277 kb on + strand at 516.277 kb on + strand at 516.277 kb on + strand at 516.278 kb on - strand at 516.278 kb on - strand at 516.293 kb on + strand at 516.293 kb on + strand at 516.293 kb on + strand at 516.293 kb on + strand at 516.380 kb on + strand, within GFF470 at 516.605 kb on + strand, within GFF470 at 516.605 kb on + strand, within GFF470 at 516.605 kb on + strand, within GFF470 at 516.605 kb on + strand, within GFF470 at 516.605 kb on + strand, within GFF470 at 516.606 kb on - strand, within GFF470 at 516.606 kb on - strand, within GFF470 at 516.606 kb on - strand, within GFF470 at 516.822 kb on - strand, within GFF470 at 516.822 kb on - strand, within GFF470 at 516.822 kb on - strand, within GFF470 at 516.866 kb on + strand, within GFF470 at 516.867 kb on - strand, within GFF470 at 516.867 kb on - strand, within GFF470 at 516.930 kb on - strand at 516.987 kb on - strand at 517.010 kb on + strand at 517.010 kb on + strand at 517.010 kb on + strand at 517.011 kb on - strand at 517.011 kb on - strand at 517.011 kb on - strand at 517.011 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 515,708 - +0.4 515,765 + +0.0 515,765 + -1.3 515,849 + GFF469 0.22 -0.9 515,849 + GFF469 0.22 -0.2 515,867 + GFF469 0.27 +0.4 515,868 - GFF469 0.27 +1.0 515,902 + GFF469 0.36 +0.5 515,903 - GFF469 0.36 +0.6 516,014 + GFF469 0.65 +0.5 516,015 - GFF469 0.65 +0.4 516,041 + GFF469 0.72 -0.4 516,041 + GFF469 0.72 -0.3 516,041 + GFF469 0.72 +1.1 516,041 + GFF469 0.72 -0.1 516,042 - GFF469 0.72 +0.9 516,042 - GFF469 0.72 -0.0 516,042 - GFF469 0.72 +0.7 516,042 - GFF469 0.72 +0.7 516,183 + -0.5 516,190 + +0.4 516,226 + -0.2 516,227 - -0.3 516,227 - +0.8 516,246 - -0.5 516,246 - +0.4 516,258 + +0.2 516,258 + -1.0 516,258 + -0.9 516,258 + +0.9 516,258 + -0.2 516,258 + -0.4 516,258 + -0.4 516,259 - -0.9 516,259 - -1.7 516,259 - -0.7 516,259 - -1.6 516,277 + -1.2 516,277 + -0.8 516,277 + +0.1 516,278 - -0.0 516,278 - +0.6 516,293 + -0.4 516,293 + +0.6 516,293 + -0.3 516,293 + -1.2 516,380 + GFF470 0.12 -0.7 516,605 + GFF470 0.44 -1.3 516,605 + GFF470 0.44 -0.2 516,605 + GFF470 0.44 -0.6 516,605 + GFF470 0.44 -0.4 516,605 + GFF470 0.44 -0.2 516,606 - GFF470 0.44 -0.7 516,606 - GFF470 0.44 -0.2 516,606 - GFF470 0.44 +1.2 516,822 - GFF470 0.76 -0.6 516,822 - GFF470 0.76 -0.3 516,822 - GFF470 0.76 -0.0 516,866 + GFF470 0.82 -0.9 516,867 - GFF470 0.82 -0.7 516,867 - GFF470 0.82 +0.5 516,930 - -0.6 516,987 - -0.7 517,010 + -0.1 517,010 + -0.1 517,010 + -1.3 517,011 - -0.5 517,011 - +0.1 517,011 - -1.7 517,011 - +0.0
Or see this region's nucleotide sequence