Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4643 and GFF4644 are separated by 145 nucleotides GFF4644 and GFF4645 are separated by 230 nucleotides
GFF4643 - Sensor protein KdpD, at 125,556 to 128,207
GFF4643
GFF4644 - Potassium-transporting ATPase KdpC subunit, at 128,353 to 128,898
GFF4644
GFF4645 - Potassium-transporting ATPase ATP-binding subunit, at 129,129 to 131,186
GFF4645
Position (kb) 128
129 Strain fitness (log2 ratio) -2
-1
0
1 at 127.627 kb on + strand, within GFF4643 at 127.627 kb on + strand, within GFF4643 at 127.627 kb on + strand, within GFF4643 at 127.627 kb on + strand, within GFF4643 at 127.628 kb on - strand, within GFF4643 at 127.628 kb on - strand, within GFF4643 at 127.628 kb on - strand, within GFF4643 at 127.737 kb on + strand, within GFF4643 at 127.738 kb on - strand, within GFF4643 at 127.738 kb on - strand, within GFF4643 at 127.963 kb on + strand at 128.101 kb on + strand at 128.101 kb on + strand at 128.101 kb on + strand at 128.102 kb on - strand at 128.175 kb on + strand at 128.176 kb on - strand at 128.176 kb on - strand at 128.224 kb on + strand at 128.224 kb on + strand at 128.283 kb on + strand at 128.283 kb on + strand at 128.304 kb on + strand at 128.304 kb on + strand at 128.304 kb on + strand at 128.305 kb on - strand at 128.305 kb on - strand at 128.305 kb on - strand at 128.305 kb on - strand at 128.354 kb on + strand at 128.354 kb on + strand at 128.495 kb on + strand, within GFF4644 at 128.608 kb on + strand, within GFF4644 at 128.672 kb on + strand, within GFF4644 at 128.672 kb on + strand, within GFF4644 at 128.672 kb on + strand, within GFF4644 at 128.672 kb on + strand, within GFF4644 at 128.673 kb on - strand, within GFF4644 at 128.831 kb on + strand, within GFF4644 at 128.884 kb on + strand at 128.884 kb on + strand at 129.208 kb on + strand at 129.208 kb on + strand at 129.418 kb on + strand, within GFF4645 at 129.418 kb on + strand, within GFF4645 at 129.418 kb on + strand, within GFF4645 at 129.419 kb on - strand, within GFF4645 at 129.419 kb on - strand, within GFF4645 at 129.512 kb on + strand, within GFF4645 at 129.867 kb on - strand, within GFF4645
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 127,627 + GFF4643 0.78 -0.7 127,627 + GFF4643 0.78 -2.1 127,627 + GFF4643 0.78 -0.3 127,627 + GFF4643 0.78 +0.1 127,628 - GFF4643 0.78 +0.2 127,628 - GFF4643 0.78 -0.4 127,628 - GFF4643 0.78 +0.5 127,737 + GFF4643 0.82 +0.2 127,738 - GFF4643 0.82 -0.9 127,738 - GFF4643 0.82 +0.2 127,963 + +0.3 128,101 + -0.5 128,101 + +1.3 128,101 + +0.4 128,102 - +0.1 128,175 + +1.4 128,176 - +1.4 128,176 - -1.3 128,224 + -1.6 128,224 + +0.4 128,283 + -0.6 128,283 + -0.7 128,304 + +1.1 128,304 + +0.3 128,304 + +0.1 128,305 - +0.1 128,305 - +1.2 128,305 - -0.4 128,305 - +0.4 128,354 + -0.9 128,354 + +0.1 128,495 + GFF4644 0.26 -0.6 128,608 + GFF4644 0.47 -0.2 128,672 + GFF4644 0.58 +0.9 128,672 + GFF4644 0.58 +1.4 128,672 + GFF4644 0.58 -0.1 128,672 + GFF4644 0.58 +1.2 128,673 - GFF4644 0.59 -0.8 128,831 + GFF4644 0.88 +0.1 128,884 + -0.7 128,884 + +0.4 129,208 + +0.2 129,208 + +0.5 129,418 + GFF4645 0.14 -0.6 129,418 + GFF4645 0.14 -0.1 129,418 + GFF4645 0.14 -0.3 129,419 - GFF4645 0.14 +1.0 129,419 - GFF4645 0.14 +0.4 129,512 + GFF4645 0.19 +0.9 129,867 - GFF4645 0.36 +1.3
Or see this region's nucleotide sequence