Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4614 and GFF4615 are separated by 125 nucleotides GFF4615 and GFF4616 are separated by 2 nucleotides GFF4616 and GFF4617 are separated by 9 nucleotides
GFF4614 - hypothetical protein, at 100,432 to 101,574
GFF4614
GFF4615 - hypothetical protein, at 101,700 to 102,116
GFF4615
GFF4616 - hypothetical protein, at 102,119 to 102,601
GFF4616
GFF4617 - HTH-type transcriptional regulator CysB, at 102,611 to 103,585
GFF4617
Position (kb) 101
102
103 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 101.613 kb on + strand at 101.614 kb on - strand at 101.614 kb on - strand at 101.834 kb on + strand, within GFF4615 at 101.835 kb on - strand, within GFF4615 at 101.835 kb on - strand, within GFF4615 at 101.835 kb on - strand, within GFF4615 at 101.955 kb on + strand, within GFF4615 at 101.955 kb on + strand, within GFF4615 at 102.245 kb on + strand, within GFF4616 at 102.246 kb on - strand, within GFF4616 at 102.246 kb on - strand, within GFF4616 at 102.246 kb on - strand, within GFF4616 at 102.272 kb on + strand, within GFF4616 at 102.273 kb on - strand, within GFF4616 at 102.273 kb on - strand, within GFF4616 at 102.273 kb on - strand, within GFF4616 at 102.353 kb on + strand, within GFF4616 at 102.354 kb on - strand, within GFF4616 at 102.354 kb on - strand, within GFF4616 at 102.354 kb on - strand, within GFF4616 at 102.354 kb on - strand, within GFF4616 at 102.612 kb on + strand at 102.613 kb on - strand at 102.812 kb on + strand, within GFF4617 at 102.812 kb on + strand, within GFF4617 at 102.813 kb on - strand, within GFF4617 at 102.813 kb on - strand, within GFF4617 at 102.853 kb on + strand, within GFF4617 at 102.866 kb on + strand, within GFF4617 at 102.888 kb on + strand, within GFF4617 at 102.889 kb on - strand, within GFF4617 at 102.889 kb on - strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 103.000 kb on + strand, within GFF4617 at 103.000 kb on + strand, within GFF4617 at 103.001 kb on - strand, within GFF4617 at 103.001 kb on - strand, within GFF4617 at 103.001 kb on - strand, within GFF4617
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 101,613 + -0.1 101,614 - -0.5 101,614 - -0.2 101,834 + GFF4615 0.32 +0.7 101,835 - GFF4615 0.32 -0.3 101,835 - GFF4615 0.32 -1.3 101,835 - GFF4615 0.32 +0.7 101,955 + GFF4615 0.61 +0.2 101,955 + GFF4615 0.61 +1.4 102,245 + GFF4616 0.26 +1.0 102,246 - GFF4616 0.26 -0.4 102,246 - GFF4616 0.26 +0.9 102,246 - GFF4616 0.26 -0.4 102,272 + GFF4616 0.32 +0.3 102,273 - GFF4616 0.32 +1.9 102,273 - GFF4616 0.32 -1.1 102,273 - GFF4616 0.32 -0.2 102,353 + GFF4616 0.48 -0.9 102,354 - GFF4616 0.49 +0.4 102,354 - GFF4616 0.49 -0.5 102,354 - GFF4616 0.49 -1.9 102,354 - GFF4616 0.49 -0.2 102,612 + +0.2 102,613 - +0.3 102,812 + GFF4617 0.21 -2.2 102,812 + GFF4617 0.21 -2.5 102,813 - GFF4617 0.21 -0.2 102,813 - GFF4617 0.21 -0.8 102,853 + GFF4617 0.25 -1.3 102,866 + GFF4617 0.26 -0.8 102,888 + GFF4617 0.28 -1.6 102,889 - GFF4617 0.29 -0.6 102,889 - GFF4617 0.29 -0.9 102,996 + GFF4617 0.39 -1.6 102,996 + GFF4617 0.39 -1.4 102,996 + GFF4617 0.39 -0.1 102,996 + GFF4617 0.39 -1.0 102,996 + GFF4617 0.39 -0.9 102,996 + GFF4617 0.39 -2.3 102,997 - GFF4617 0.40 -0.4 102,997 - GFF4617 0.40 -1.8 102,997 - GFF4617 0.40 -1.4 102,997 - GFF4617 0.40 -2.3 102,997 - GFF4617 0.40 -1.8 102,997 - GFF4617 0.40 -1.2 102,997 - GFF4617 0.40 -1.5 102,997 - GFF4617 0.40 -2.1 103,000 + GFF4617 0.40 -4.2 103,000 + GFF4617 0.40 -0.9 103,001 - GFF4617 0.40 -1.0 103,001 - GFF4617 0.40 -2.6 103,001 - GFF4617 0.40 -1.3
Or see this region's nucleotide sequence