Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4569 and GFF4570 overlap by 4 nucleotides GFF4570 and GFF4571 overlap by 17 nucleotides GFF4571 and GFF4572 are separated by 315 nucleotides GFF4572 and GFF4573 are separated by 59 nucleotides
GFF4569 - hypothetical protein, at 55,580 to 56,473
GFF4569
GFF4570 - Transcriptional regulatory protein DegU, at 56,470 to 57,129
GFF4570
GFF4571 - putative lipid kinase YegS, at 57,113 to 58,030
GFF4571
GFF4572 - hypothetical protein, at 58,346 to 58,654
GFF4572
GFF4573 - Molybdopterin molybdenumtransferase, at 58,714 to 59,940
GFF4573
Position (kb) 57
58
59 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 56.415 kb on + strand at 56.415 kb on + strand at 56.415 kb on + strand at 56.415 kb on + strand at 56.452 kb on + strand at 56.453 kb on - strand at 56.458 kb on + strand at 56.458 kb on + strand at 56.459 kb on - strand at 56.459 kb on - strand at 56.459 kb on - strand at 56.465 kb on - strand at 56.478 kb on + strand at 56.478 kb on + strand at 56.478 kb on + strand at 56.478 kb on + strand at 56.478 kb on + strand at 56.479 kb on - strand at 56.479 kb on - strand at 56.479 kb on - strand at 56.479 kb on - strand at 56.483 kb on + strand at 56.483 kb on + strand at 56.483 kb on + strand at 56.483 kb on + strand at 56.483 kb on + strand at 56.483 kb on + strand at 56.483 kb on + strand at 56.484 kb on - strand at 56.484 kb on - strand at 56.484 kb on - strand at 56.534 kb on + strand at 56.541 kb on + strand, within GFF4570 at 56.559 kb on - strand, within GFF4570 at 56.624 kb on + strand, within GFF4570 at 56.624 kb on + strand, within GFF4570 at 56.625 kb on - strand, within GFF4570 at 56.625 kb on - strand, within GFF4570 at 56.842 kb on + strand, within GFF4570 at 56.843 kb on - strand, within GFF4570 at 56.865 kb on + strand, within GFF4570 at 56.865 kb on + strand, within GFF4570 at 57.068 kb on - strand at 57.068 kb on - strand at 57.068 kb on - strand at 57.068 kb on - strand at 57.302 kb on - strand, within GFF4571 at 57.302 kb on - strand, within GFF4571 at 57.302 kb on - strand, within GFF4571 at 57.302 kb on - strand, within GFF4571 at 57.302 kb on - strand, within GFF4571 at 57.510 kb on + strand, within GFF4571 at 57.511 kb on - strand, within GFF4571 at 57.555 kb on + strand, within GFF4571 at 57.555 kb on + strand, within GFF4571 at 57.556 kb on - strand, within GFF4571 at 57.595 kb on + strand, within GFF4571 at 57.595 kb on + strand, within GFF4571 at 57.595 kb on + strand, within GFF4571 at 57.595 kb on + strand, within GFF4571 at 57.596 kb on - strand, within GFF4571 at 57.596 kb on - strand, within GFF4571 at 57.695 kb on + strand, within GFF4571 at 57.696 kb on - strand, within GFF4571 at 58.030 kb on + strand at 58.030 kb on + strand at 58.030 kb on + strand at 58.031 kb on - strand at 58.108 kb on + strand at 58.108 kb on + strand at 58.109 kb on - strand at 58.109 kb on - strand at 58.109 kb on - strand at 58.109 kb on - strand at 58.109 kb on - strand at 58.109 kb on - strand at 58.109 kb on - strand at 58.136 kb on - strand at 58.136 kb on - strand at 58.178 kb on - strand at 58.237 kb on + strand at 58.237 kb on + strand at 58.238 kb on - strand at 58.304 kb on + strand at 58.304 kb on + strand at 58.305 kb on - strand at 58.326 kb on + strand at 58.326 kb on + strand at 58.327 kb on - strand at 58.327 kb on - strand at 58.339 kb on + strand at 58.340 kb on - strand at 58.340 kb on - strand at 58.340 kb on - strand at 58.429 kb on + strand, within GFF4572 at 58.499 kb on + strand, within GFF4572 at 58.499 kb on + strand, within GFF4572 at 58.499 kb on + strand, within GFF4572 at 58.499 kb on + strand, within GFF4572 at 58.500 kb on - strand, within GFF4572 at 58.500 kb on - strand, within GFF4572 at 58.500 kb on - strand, within GFF4572 at 58.576 kb on + strand, within GFF4572 at 58.684 kb on - strand at 58.815 kb on + strand at 58.844 kb on + strand, within GFF4573 at 58.845 kb on - strand, within GFF4573 at 58.883 kb on + strand, within GFF4573 at 58.884 kb on - strand, within GFF4573 at 58.884 kb on - strand, within GFF4573 at 58.884 kb on - strand, within GFF4573 at 58.979 kb on + strand, within GFF4573 at 58.980 kb on - strand, within GFF4573 at 58.980 kb on - strand, within GFF4573
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 56,415 + +0.1 56,415 + -1.0 56,415 + +0.8 56,415 + -3.1 56,452 + -0.0 56,453 - +0.8 56,458 + -0.6 56,458 + -0.8 56,459 - -0.4 56,459 - +0.9 56,459 - +0.1 56,465 - +0.9 56,478 + -0.1 56,478 + +0.7 56,478 + -0.8 56,478 + -0.3 56,478 + +0.5 56,479 - -0.6 56,479 - -1.1 56,479 - +0.2 56,479 - -0.5 56,483 + -0.3 56,483 + -0.0 56,483 + -0.6 56,483 + +1.1 56,483 + +0.0 56,483 + -0.4 56,483 + -0.3 56,484 - +0.2 56,484 - -1.1 56,484 - +0.0 56,534 + -1.4 56,541 + GFF4570 0.11 -0.2 56,559 - GFF4570 0.13 -0.0 56,624 + GFF4570 0.23 -0.5 56,624 + GFF4570 0.23 -0.0 56,625 - GFF4570 0.23 -0.8 56,625 - GFF4570 0.23 +0.8 56,842 + GFF4570 0.56 +0.9 56,843 - GFF4570 0.57 +0.3 56,865 + GFF4570 0.60 -1.8 56,865 + GFF4570 0.60 +0.2 57,068 - -0.4 57,068 - +0.4 57,068 - -0.1 57,068 - +1.1 57,302 - GFF4571 0.21 +0.4 57,302 - GFF4571 0.21 +0.1 57,302 - GFF4571 0.21 -0.5 57,302 - GFF4571 0.21 +0.7 57,302 - GFF4571 0.21 +0.5 57,510 + GFF4571 0.43 +0.7 57,511 - GFF4571 0.43 -0.3 57,555 + GFF4571 0.48 +0.1 57,555 + GFF4571 0.48 +0.9 57,556 - GFF4571 0.48 +0.4 57,595 + GFF4571 0.53 +0.4 57,595 + GFF4571 0.53 +0.2 57,595 + GFF4571 0.53 -0.3 57,595 + GFF4571 0.53 +0.6 57,596 - GFF4571 0.53 +0.8 57,596 - GFF4571 0.53 +1.2 57,695 + GFF4571 0.63 +2.1 57,696 - GFF4571 0.64 -0.0 58,030 + +0.2 58,030 + -0.1 58,030 + +0.4 58,031 - -0.0 58,108 + -1.6 58,108 + -1.1 58,109 - +2.6 58,109 - -0.4 58,109 - +0.1 58,109 - -0.6 58,109 - +0.3 58,109 - +0.8 58,109 - +1.1 58,136 - -0.9 58,136 - +0.5 58,178 - +0.0 58,237 + -0.1 58,237 + -0.3 58,238 - -1.4 58,304 + -0.1 58,304 + -0.1 58,305 - -0.1 58,326 + +0.0 58,326 + -0.3 58,327 - +0.0 58,327 - +0.7 58,339 + -0.8 58,340 - +0.7 58,340 - +0.4 58,340 - -0.2 58,429 + GFF4572 0.27 -1.0 58,499 + GFF4572 0.50 -0.6 58,499 + GFF4572 0.50 +0.6 58,499 + GFF4572 0.50 +0.3 58,499 + GFF4572 0.50 +0.1 58,500 - GFF4572 0.50 +0.2 58,500 - GFF4572 0.50 +0.0 58,500 - GFF4572 0.50 -0.4 58,576 + GFF4572 0.74 +1.0 58,684 - -0.6 58,815 + -2.6 58,844 + GFF4573 0.11 -3.3 58,845 - GFF4573 0.11 -1.6 58,883 + GFF4573 0.14 -2.1 58,884 - GFF4573 0.14 -2.1 58,884 - GFF4573 0.14 -3.4 58,884 - GFF4573 0.14 -3.3 58,979 + GFF4573 0.22 -0.3 58,980 - GFF4573 0.22 -1.7 58,980 - GFF4573 0.22 -2.1
Or see this region's nucleotide sequence