Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4222 and GFF4223 are separated by 200 nucleotides GFF4223 and GFF4224 are separated by 1 nucleotides GFF4224 and GFF4225 are separated by 45 nucleotides
GFF4222 - hypothetical protein, at 194,048 to 194,629
GFF4222
GFF4223 - Biopolymer transport protein ExbD, at 194,830 to 195,231
GFF4223
GFF4224 - Tol-Pal system protein TolQ, at 195,233 to 195,958
GFF4224
GFF4225 - hypothetical protein, at 196,004 to 196,813
GFF4225
Position (kb) 195
196 Strain fitness (log2 ratio) -2
-1
0
1 at 194.370 kb on + strand, within GFF4222 at 194.371 kb on - strand, within GFF4222 at 194.371 kb on - strand, within GFF4222 at 194.607 kb on + strand at 194.667 kb on + strand at 194.669 kb on + strand at 194.669 kb on + strand at 194.669 kb on + strand at 194.669 kb on + strand at 194.669 kb on + strand at 194.669 kb on + strand at 194.670 kb on - strand at 194.670 kb on - strand at 194.670 kb on - strand at 194.670 kb on - strand at 194.670 kb on - strand at 194.670 kb on - strand at 194.670 kb on - strand at 194.670 kb on - strand at 194.842 kb on - strand at 194.907 kb on - strand, within GFF4223 at 195.015 kb on + strand, within GFF4223 at 195.138 kb on + strand, within GFF4223 at 195.333 kb on + strand, within GFF4224 at 195.333 kb on + strand, within GFF4224 at 195.334 kb on - strand, within GFF4224 at 195.334 kb on - strand, within GFF4224 at 195.393 kb on + strand, within GFF4224 at 195.394 kb on - strand, within GFF4224 at 195.394 kb on - strand, within GFF4224 at 195.400 kb on - strand, within GFF4224 at 195.400 kb on - strand, within GFF4224 at 195.400 kb on - strand, within GFF4224 at 195.400 kb on - strand, within GFF4224 at 195.724 kb on - strand, within GFF4224 at 195.950 kb on + strand at 195.951 kb on - strand at 196.257 kb on + strand, within GFF4225 at 196.257 kb on + strand, within GFF4225 at 196.257 kb on + strand, within GFF4225 at 196.258 kb on - strand, within GFF4225 at 196.611 kb on + strand, within GFF4225 at 196.763 kb on - strand at 196.763 kb on - strand at 196.843 kb on + strand at 196.843 kb on + strand at 196.844 kb on - strand at 196.847 kb on - strand at 196.902 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 194,370 + GFF4222 0.55 -1.8 194,371 - GFF4222 0.55 +0.8 194,371 - GFF4222 0.55 +0.4 194,607 + +0.8 194,667 + +0.2 194,669 + -0.4 194,669 + -0.2 194,669 + -0.6 194,669 + -0.0 194,669 + -1.2 194,669 + +0.1 194,670 - +1.3 194,670 - -0.4 194,670 - +0.3 194,670 - -0.2 194,670 - +0.8 194,670 - -0.1 194,670 - +1.4 194,670 - -0.6 194,842 - +0.1 194,907 - GFF4223 0.19 -0.0 195,015 + GFF4223 0.46 -0.2 195,138 + GFF4223 0.77 +1.3 195,333 + GFF4224 0.14 -0.7 195,333 + GFF4224 0.14 +0.7 195,334 - GFF4224 0.14 +0.7 195,334 - GFF4224 0.14 +1.6 195,393 + GFF4224 0.22 +0.8 195,394 - GFF4224 0.22 -0.1 195,394 - GFF4224 0.22 +1.1 195,400 - GFF4224 0.23 +0.8 195,400 - GFF4224 0.23 +0.4 195,400 - GFF4224 0.23 -0.7 195,400 - GFF4224 0.23 +0.9 195,724 - GFF4224 0.68 -1.4 195,950 + -0.0 195,951 - -0.4 196,257 + GFF4225 0.31 -0.1 196,257 + GFF4225 0.31 +0.4 196,257 + GFF4225 0.31 -0.2 196,258 - GFF4225 0.31 +0.7 196,611 + GFF4225 0.75 +0.5 196,763 - +0.0 196,763 - -1.2 196,843 + -1.1 196,843 + +0.2 196,844 - -0.0 196,847 - -0.0 196,902 + -0.1
Or see this region's nucleotide sequence