Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4211 and GFF4212 overlap by 4 nucleotides GFF4212 and GFF4213 overlap by 4 nucleotides
GFF4211 - Cobalt-zinc-cadmium resistance protein CzcA, at 181,832 to 184,894
GFF4211
GFF4212 - Macrolide export protein MacA, at 184,891 to 185,955
GFF4212
GFF4213 - Multidrug resistance protein MdtE, at 185,952 to 187,055
GFF4213
Position (kb) 184
185
186 Strain fitness (log2 ratio) -2
-1
0
1 at 184.090 kb on - strand, within GFF4211 at 184.327 kb on - strand, within GFF4211 at 184.327 kb on - strand, within GFF4211 at 184.385 kb on + strand, within GFF4211 at 184.386 kb on - strand, within GFF4211 at 184.410 kb on + strand, within GFF4211 at 184.455 kb on + strand, within GFF4211 at 184.468 kb on - strand, within GFF4211 at 184.602 kb on + strand at 184.602 kb on + strand at 184.608 kb on + strand at 184.609 kb on - strand at 184.609 kb on - strand at 184.648 kb on - strand at 184.648 kb on - strand at 184.648 kb on - strand at 184.836 kb on + strand at 184.836 kb on + strand at 184.837 kb on - strand at 184.837 kb on - strand at 185.404 kb on + strand, within GFF4212 at 185.405 kb on - strand, within GFF4212 at 185.472 kb on - strand, within GFF4212 at 185.798 kb on + strand, within GFF4212 at 185.983 kb on + strand at 185.983 kb on + strand at 186.097 kb on + strand, within GFF4213 at 186.098 kb on - strand, within GFF4213 at 186.240 kb on + strand, within GFF4213 at 186.241 kb on - strand, within GFF4213 at 186.424 kb on + strand, within GFF4213 at 186.556 kb on + strand, within GFF4213 at 186.556 kb on + strand, within GFF4213 at 186.664 kb on + strand, within GFF4213 at 186.664 kb on + strand, within GFF4213 at 186.925 kb on + strand, within GFF4213 at 186.925 kb on + strand, within GFF4213 at 186.925 kb on + strand, within GFF4213 at 186.925 kb on + strand, within GFF4213
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 184,090 - GFF4211 0.74 -0.4 184,327 - GFF4211 0.81 +0.2 184,327 - GFF4211 0.81 +1.0 184,385 + GFF4211 0.83 -0.3 184,386 - GFF4211 0.83 -1.6 184,410 + GFF4211 0.84 -2.1 184,455 + GFF4211 0.86 +0.1 184,468 - GFF4211 0.86 -0.1 184,602 + +0.6 184,602 + +0.6 184,608 + -1.2 184,609 - +0.6 184,609 - -0.7 184,648 - -0.1 184,648 - +1.3 184,648 - +0.6 184,836 + -0.1 184,836 + -0.3 184,837 - +1.1 184,837 - +0.2 185,404 + GFF4212 0.48 +0.5 185,405 - GFF4212 0.48 -0.0 185,472 - GFF4212 0.55 +0.4 185,798 + GFF4212 0.85 +0.4 185,983 + -0.7 185,983 + -2.2 186,097 + GFF4213 0.13 +0.6 186,098 - GFF4213 0.13 +0.8 186,240 + GFF4213 0.26 -0.6 186,241 - GFF4213 0.26 +1.2 186,424 + GFF4213 0.43 +0.6 186,556 + GFF4213 0.55 -0.1 186,556 + GFF4213 0.55 +0.3 186,664 + GFF4213 0.64 -1.5 186,664 + GFF4213 0.64 +0.9 186,925 + GFF4213 0.88 -0.1 186,925 + GFF4213 0.88 -0.9 186,925 + GFF4213 0.88 -0.1 186,925 + GFF4213 0.88 +0.6
Or see this region's nucleotide sequence