Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4085 and GFF4086 are separated by 96 nucleotides GFF4086 and GFF4087 are separated by 57 nucleotides GFF4087 and GFF4088 are separated by 1 nucleotides GFF4088 and GFF4089 are separated by 153 nucleotides
GFF4085 - tRNA (cytidine(34)-2'-O)-methyltransferase, at 41,759 to 42,214
GFF4085
GFF4086 - Protein-export protein SecB, at 42,311 to 42,796
GFF4086
GFF4087 - Glutaredoxin 3, at 42,854 to 43,108
GFF4087
GFF4088 - putative protein YibN, at 43,110 to 43,523
GFF4088
GFF4089 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 43,677 to 45,206
GFF4089
Position (kb) 43
44 Strain fitness (log2 ratio) -2
-1
0
1
2 at 42.366 kb on + strand, within GFF4086 at 42.722 kb on + strand, within GFF4086 at 42.722 kb on + strand, within GFF4086 at 42.722 kb on + strand, within GFF4086 at 42.722 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.837 kb on + strand at 42.837 kb on + strand at 42.837 kb on + strand at 42.838 kb on - strand at 42.838 kb on - strand at 42.900 kb on + strand, within GFF4087 at 42.900 kb on + strand, within GFF4087 at 42.901 kb on - strand, within GFF4087 at 42.902 kb on + strand, within GFF4087 at 42.902 kb on + strand, within GFF4087 at 42.902 kb on + strand, within GFF4087 at 43.068 kb on + strand, within GFF4087 at 43.068 kb on + strand, within GFF4087 at 43.069 kb on - strand, within GFF4087 at 43.078 kb on - strand, within GFF4087 at 43.078 kb on - strand, within GFF4087 at 43.078 kb on - strand, within GFF4087 at 43.090 kb on - strand at 43.209 kb on - strand, within GFF4088 at 43.209 kb on - strand, within GFF4088 at 43.336 kb on + strand, within GFF4088 at 43.487 kb on - strand at 43.487 kb on - strand at 43.559 kb on + strand at 43.559 kb on + strand at 43.560 kb on - strand at 43.560 kb on - strand at 43.561 kb on + strand at 43.561 kb on + strand at 43.561 kb on + strand at 43.561 kb on + strand at 43.561 kb on + strand at 43.561 kb on + strand at 43.562 kb on - strand at 43.562 kb on - strand at 43.562 kb on - strand at 43.572 kb on + strand at 43.573 kb on - strand at 43.573 kb on - strand at 43.656 kb on + strand at 43.657 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 42,366 + GFF4086 0.11 -1.2 42,722 + GFF4086 0.85 +0.3 42,722 + GFF4086 0.85 +0.1 42,722 + GFF4086 0.85 +0.7 42,722 + GFF4086 0.85 -0.5 42,726 + GFF4086 0.85 -0.2 42,726 + GFF4086 0.85 -0.0 42,726 + GFF4086 0.85 -0.5 42,726 + GFF4086 0.85 +0.1 42,726 + GFF4086 0.85 -0.4 42,726 + GFF4086 0.85 +0.4 42,726 + GFF4086 0.85 +0.1 42,726 + GFF4086 0.85 -0.1 42,727 - GFF4086 0.86 -0.7 42,727 - GFF4086 0.86 +0.2 42,727 - GFF4086 0.86 +0.1 42,727 - GFF4086 0.86 +0.4 42,727 - GFF4086 0.86 +1.0 42,727 - GFF4086 0.86 -0.0 42,727 - GFF4086 0.86 -0.6 42,727 - GFF4086 0.86 -1.0 42,727 - GFF4086 0.86 +0.8 42,727 - GFF4086 0.86 +0.1 42,837 + -0.5 42,837 + -0.5 42,837 + -0.5 42,838 - -0.1 42,838 - -1.1 42,900 + GFF4087 0.18 +0.2 42,900 + GFF4087 0.18 +0.7 42,901 - GFF4087 0.18 -0.3 42,902 + GFF4087 0.19 +0.6 42,902 + GFF4087 0.19 -0.2 42,902 + GFF4087 0.19 -1.2 43,068 + GFF4087 0.84 +1.1 43,068 + GFF4087 0.84 +0.3 43,069 - GFF4087 0.84 -1.5 43,078 - GFF4087 0.88 +0.2 43,078 - GFF4087 0.88 -1.2 43,078 - GFF4087 0.88 +0.3 43,090 - +0.9 43,209 - GFF4088 0.24 +1.6 43,209 - GFF4088 0.24 +0.4 43,336 + GFF4088 0.55 +0.3 43,487 - +1.0 43,487 - +0.6 43,559 + +0.3 43,559 + -0.1 43,560 - -0.5 43,560 - -0.2 43,561 + -2.1 43,561 + +0.3 43,561 + -0.0 43,561 + +0.9 43,561 + -1.5 43,561 + +0.3 43,562 - +1.0 43,562 - -0.5 43,562 - -0.7 43,572 + +0.4 43,573 - +0.9 43,573 - -0.2 43,656 + +2.1 43,657 - +0.1
Or see this region's nucleotide sequence