Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3742 and GFF3743 are separated by 85 nucleotides GFF3743 and GFF3744 are separated by 167 nucleotides GFF3744 and GFF3745 are separated by 105 nucleotides
GFF3742 - hypothetical protein, at 356,215 to 356,556
GFF3742
GFF3743 - hypothetical protein, at 356,642 to 357,283
GFF3743
GFF3744 - hypothetical protein, at 357,451 to 357,699
GFF3744
GFF3745 - hypothetical protein, at 357,805 to 358,962
GFF3745
Position (kb) 357
358 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 356.546 kb on - strand at 356.561 kb on + strand at 356.562 kb on - strand at 356.575 kb on - strand at 356.629 kb on + strand at 356.629 kb on + strand at 356.808 kb on + strand, within GFF3743 at 356.826 kb on + strand, within GFF3743 at 356.827 kb on - strand, within GFF3743 at 356.946 kb on + strand, within GFF3743 at 357.088 kb on - strand, within GFF3743 at 357.099 kb on + strand, within GFF3743 at 357.099 kb on + strand, within GFF3743 at 357.233 kb on + strand at 357.233 kb on + strand at 357.233 kb on + strand at 357.371 kb on + strand at 357.371 kb on + strand at 357.372 kb on - strand at 357.386 kb on + strand at 357.386 kb on + strand at 357.386 kb on + strand at 357.387 kb on - strand at 357.507 kb on - strand, within GFF3744 at 357.515 kb on - strand, within GFF3744 at 357.526 kb on + strand, within GFF3744 at 357.527 kb on - strand, within GFF3744 at 357.527 kb on - strand, within GFF3744 at 357.602 kb on - strand, within GFF3744 at 357.672 kb on - strand, within GFF3744 at 357.762 kb on + strand at 357.762 kb on + strand at 357.763 kb on - strand at 357.776 kb on + strand at 357.776 kb on + strand at 357.777 kb on - strand at 357.785 kb on - strand at 357.785 kb on - strand at 357.868 kb on + strand at 357.868 kb on + strand at 358.088 kb on - strand, within GFF3745 at 358.258 kb on + strand, within GFF3745 at 358.258 kb on + strand, within GFF3745 at 358.258 kb on + strand, within GFF3745 at 358.259 kb on - strand, within GFF3745 at 358.285 kb on + strand, within GFF3745 at 358.285 kb on + strand, within GFF3745 at 358.286 kb on - strand, within GFF3745 at 358.486 kb on + strand, within GFF3745 at 358.487 kb on - strand, within GFF3745 at 358.604 kb on - strand, within GFF3745 at 358.612 kb on - strand, within GFF3745
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 356,546 - +0.4 356,561 + -1.5 356,562 - +0.6 356,575 - -0.6 356,629 + -0.5 356,629 + -2.9 356,808 + GFF3743 0.26 -1.0 356,826 + GFF3743 0.29 +0.1 356,827 - GFF3743 0.29 +0.6 356,946 + GFF3743 0.47 -0.6 357,088 - GFF3743 0.69 +0.1 357,099 + GFF3743 0.71 -0.0 357,099 + GFF3743 0.71 +0.6 357,233 + -0.4 357,233 + -0.9 357,233 + -0.5 357,371 + +1.6 357,371 + +0.0 357,372 - -1.2 357,386 + -0.2 357,386 + -1.7 357,386 + +0.4 357,387 - -0.3 357,507 - GFF3744 0.22 -0.2 357,515 - GFF3744 0.26 +0.7 357,526 + GFF3744 0.30 +0.8 357,527 - GFF3744 0.31 +0.8 357,527 - GFF3744 0.31 -0.0 357,602 - GFF3744 0.61 +1.1 357,672 - GFF3744 0.89 +1.7 357,762 + -1.5 357,762 + +1.0 357,763 - -0.3 357,776 + +0.3 357,776 + -0.3 357,777 - -0.8 357,785 - -1.5 357,785 - +0.5 357,868 + +0.0 357,868 + -0.2 358,088 - GFF3745 0.24 -1.6 358,258 + GFF3745 0.39 +0.4 358,258 + GFF3745 0.39 -0.2 358,258 + GFF3745 0.39 -0.6 358,259 - GFF3745 0.39 +1.1 358,285 + GFF3745 0.41 +1.1 358,285 + GFF3745 0.41 -1.0 358,286 - GFF3745 0.42 -1.0 358,486 + GFF3745 0.59 -0.5 358,487 - GFF3745 0.59 +0.4 358,604 - GFF3745 0.69 -1.2 358,612 - GFF3745 0.70 +0.3
Or see this region's nucleotide sequence