Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3689 and GFF3690 are separated by 151 nucleotides GFF3690 and GFF3691 are separated by 63 nucleotides GFF3691 and GFF3692 are separated by 292 nucleotides
GFF3689 - hypothetical protein, at 294,137 to 301,294
GFF3689
GFF3690 - hypothetical protein, at 301,446 to 301,664
GFF3690
GFF3691 - hypothetical protein, at 301,728 to 301,841
GFF3691
GFF3692 - Sulfite reductase [ferredoxin], at 302,134 to 303,792
GFF3692
Position (kb) 301
302 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 300.771 kb on - strand at 300.771 kb on - strand at 300.816 kb on + strand at 300.816 kb on + strand at 300.816 kb on + strand at 300.817 kb on - strand at 301.063 kb on + strand at 301.064 kb on - strand at 301.064 kb on - strand at 301.064 kb on - strand at 301.064 kb on - strand at 301.064 kb on - strand at 301.078 kb on - strand at 301.078 kb on - strand at 301.078 kb on - strand at 301.078 kb on - strand at 301.084 kb on + strand at 301.084 kb on + strand at 301.123 kb on - strand at 301.123 kb on - strand at 301.294 kb on + strand at 301.294 kb on + strand at 301.294 kb on + strand at 301.294 kb on + strand at 301.294 kb on + strand at 301.294 kb on + strand at 301.294 kb on + strand at 301.294 kb on + strand at 301.294 kb on + strand at 301.294 kb on + strand at 301.294 kb on + strand at 301.295 kb on - strand at 301.295 kb on - strand at 301.295 kb on - strand at 301.295 kb on - strand at 301.295 kb on - strand at 301.295 kb on - strand at 301.295 kb on - strand at 301.295 kb on - strand at 301.307 kb on + strand at 301.307 kb on + strand at 301.308 kb on - strand at 301.351 kb on + strand at 301.351 kb on + strand at 301.359 kb on + strand at 301.359 kb on + strand at 301.359 kb on + strand at 301.359 kb on + strand at 301.359 kb on + strand at 301.359 kb on + strand at 301.359 kb on + strand at 301.360 kb on - strand at 301.360 kb on - strand at 301.360 kb on - strand at 301.361 kb on + strand at 301.361 kb on + strand at 301.361 kb on + strand at 301.362 kb on - strand at 301.362 kb on - strand at 301.411 kb on + strand at 301.412 kb on - strand at 301.445 kb on + strand at 301.445 kb on + strand at 301.445 kb on + strand at 301.445 kb on + strand at 301.647 kb on + strand at 301.648 kb on - strand at 301.729 kb on + strand at 301.729 kb on + strand at 301.730 kb on - strand at 301.730 kb on - strand at 301.730 kb on - strand at 301.730 kb on - strand at 301.761 kb on + strand, within GFF3691 at 301.805 kb on + strand, within GFF3691 at 301.806 kb on - strand, within GFF3691 at 301.806 kb on - strand, within GFF3691 at 301.895 kb on + strand at 301.896 kb on - strand at 301.930 kb on - strand at 301.930 kb on - strand at 301.972 kb on + strand at 302.009 kb on + strand at 302.009 kb on + strand at 302.010 kb on - strand at 302.010 kb on - strand at 302.010 kb on - strand at 302.010 kb on - strand at 302.011 kb on + strand at 302.011 kb on + strand at 302.011 kb on + strand at 302.011 kb on + strand at 302.011 kb on + strand at 302.011 kb on + strand at 302.012 kb on - strand at 302.012 kb on - strand at 302.012 kb on - strand at 302.131 kb on + strand at 302.131 kb on + strand at 302.131 kb on + strand at 302.131 kb on + strand at 302.131 kb on + strand at 302.131 kb on + strand at 302.131 kb on + strand at 302.131 kb on + strand at 302.131 kb on + strand at 302.131 kb on + strand at 302.131 kb on + strand at 302.132 kb on - strand at 302.132 kb on - strand at 302.132 kb on - strand at 302.132 kb on - strand at 302.132 kb on - strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.133 kb on + strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.134 kb on - strand at 302.137 kb on + strand at 302.137 kb on + strand at 302.137 kb on + strand at 302.137 kb on + strand at 302.137 kb on + strand at 302.137 kb on + strand at 302.137 kb on + strand at 302.137 kb on + strand at 302.137 kb on + strand at 302.137 kb on + strand at 302.137 kb on + strand at 302.138 kb on - strand at 302.138 kb on - strand at 302.138 kb on - strand at 302.138 kb on - strand at 302.138 kb on - strand at 302.138 kb on - strand at 302.138 kb on - strand at 302.138 kb on - strand at 302.138 kb on - strand at 302.138 kb on - strand at 302.141 kb on + strand at 302.141 kb on + strand at 302.141 kb on + strand at 302.141 kb on + strand at 302.141 kb on + strand at 302.141 kb on + strand at 302.142 kb on - strand at 302.142 kb on - strand at 302.142 kb on - strand at 302.142 kb on - strand at 302.142 kb on - strand at 302.142 kb on - strand at 302.142 kb on - strand at 302.153 kb on - strand at 302.209 kb on + strand at 302.269 kb on + strand at 302.269 kb on + strand at 302.269 kb on + strand at 302.269 kb on + strand at 302.269 kb on + strand at 302.270 kb on - strand at 302.270 kb on - strand at 302.270 kb on - strand at 302.270 kb on - strand at 302.270 kb on - strand at 302.312 kb on - strand, within GFF3692 at 302.365 kb on + strand, within GFF3692 at 302.378 kb on - strand, within GFF3692 at 302.615 kb on - strand, within GFF3692 at 302.705 kb on - strand, within GFF3692 at 302.705 kb on - strand, within GFF3692 at 302.818 kb on + strand, within GFF3692 at 302.818 kb on + strand, within GFF3692 at 302.818 kb on + strand, within GFF3692 at 302.819 kb on - strand, within GFF3692 at 302.819 kb on - strand, within GFF3692
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 300,771 - -0.1 300,771 - +0.8 300,816 + +0.4 300,816 + -0.1 300,816 + -0.2 300,817 - +0.8 301,063 + -1.8 301,064 - -0.4 301,064 - +1.1 301,064 - -1.2 301,064 - -1.1 301,064 - -0.8 301,078 - +0.7 301,078 - -1.7 301,078 - +0.7 301,078 - +0.1 301,084 + -0.3 301,084 + +1.7 301,123 - -0.2 301,123 - +0.0 301,294 + +0.1 301,294 + -0.3 301,294 + -2.5 301,294 + +0.1 301,294 + -0.9 301,294 + -0.1 301,294 + +1.1 301,294 + -0.4 301,294 + +0.3 301,294 + -1.9 301,294 + +0.4 301,295 - -0.2 301,295 - -0.4 301,295 - -0.3 301,295 - -0.7 301,295 - +0.3 301,295 - -0.9 301,295 - +0.8 301,295 - +0.1 301,307 + +0.2 301,307 + -0.3 301,308 - +0.5 301,351 + -0.2 301,351 + -0.5 301,359 + -0.2 301,359 + +0.1 301,359 + -0.1 301,359 + +0.6 301,359 + -0.4 301,359 + +0.4 301,359 + -0.1 301,360 - +0.4 301,360 - -0.4 301,360 - -1.5 301,361 + -0.8 301,361 + +0.6 301,361 + +1.7 301,362 - -0.0 301,362 - +0.6 301,411 + -0.4 301,412 - -0.6 301,445 + +0.5 301,445 + -0.2 301,445 + +0.4 301,445 + +0.2 301,647 + -0.4 301,648 - +0.3 301,729 + -0.9 301,729 + +1.1 301,730 - -0.1 301,730 - -1.7 301,730 - +0.0 301,730 - -0.5 301,761 + GFF3691 0.29 +0.5 301,805 + GFF3691 0.68 +0.2 301,806 - GFF3691 0.68 +2.0 301,806 - GFF3691 0.68 -0.6 301,895 + +0.9 301,896 - +0.9 301,930 - -0.3 301,930 - +0.2 301,972 + -0.9 302,009 + -0.6 302,009 + -0.2 302,010 - -3.1 302,010 - -0.9 302,010 - -2.7 302,010 - -2.8 302,011 + -1.2 302,011 + -0.4 302,011 + +0.2 302,011 + -1.2 302,011 + -0.6 302,011 + +0.6 302,012 - -3.6 302,012 - -3.2 302,012 - -2.5 302,131 + -1.5 302,131 + -2.7 302,131 + -0.9 302,131 + -2.3 302,131 + -0.2 302,131 + -0.2 302,131 + -2.4 302,131 + -3.0 302,131 + -2.8 302,131 + -1.7 302,131 + -1.5 302,132 - -2.6 302,132 - -3.0 302,132 - -1.2 302,132 - -1.1 302,132 - -2.7 302,133 + -2.2 302,133 + -1.7 302,133 + -2.9 302,133 + -2.4 302,133 + -3.1 302,133 + -3.6 302,133 + -2.1 302,133 + -2.8 302,133 + -3.2 302,133 + -2.7 302,133 + -0.9 302,133 + -1.8 302,133 + -2.2 302,133 + -2.2 302,133 + -3.1 302,134 - -3.2 302,134 - -2.4 302,134 - -3.1 302,134 - -2.5 302,134 - -3.7 302,134 - -1.9 302,134 - -3.2 302,134 - -2.5 302,134 - -2.0 302,134 - -3.7 302,134 - -1.7 302,134 - -2.5 302,134 - -3.7 302,134 - -1.5 302,134 - -3.2 302,134 - -4.5 302,134 - -2.2 302,134 - -0.7 302,137 + -3.9 302,137 + -2.9 302,137 + -2.4 302,137 + -1.9 302,137 + -3.6 302,137 + -2.7 302,137 + -2.7 302,137 + -1.1 302,137 + -3.1 302,137 + -2.4 302,137 + -3.1 302,138 - -2.5 302,138 - -2.7 302,138 - -2.6 302,138 - -3.9 302,138 - -2.1 302,138 - -2.6 302,138 - -2.7 302,138 - -2.7 302,138 - -1.1 302,138 - -3.0 302,141 + -3.0 302,141 + -2.3 302,141 + -2.2 302,141 + -2.8 302,141 + -1.5 302,141 + -2.7 302,142 - -3.0 302,142 - -3.8 302,142 - -1.5 302,142 - -2.5 302,142 - -3.4 302,142 - -1.2 302,142 - -1.8 302,153 - -1.7 302,209 + -3.2 302,269 + -0.9 302,269 + -2.6 302,269 + -3.2 302,269 + +0.4 302,269 + -3.4 302,270 - -3.1 302,270 - -2.7 302,270 - -3.9 302,270 - -3.0 302,270 - -2.4 302,312 - GFF3692 0.11 -2.4 302,365 + GFF3692 0.14 -1.8 302,378 - GFF3692 0.15 -1.7 302,615 - GFF3692 0.29 -1.2 302,705 - GFF3692 0.34 -1.9 302,705 - GFF3692 0.34 -3.7 302,818 + GFF3692 0.41 -2.6 302,818 + GFF3692 0.41 -0.2 302,818 + GFF3692 0.41 -3.4 302,819 - GFF3692 0.41 -3.0 302,819 - GFF3692 0.41 -1.2
Or see this region's nucleotide sequence