Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3567 and GFF3568 are separated by 11 nucleotides GFF3568 and GFF3569 are separated by 2 nucleotides GFF3569 and GFF3570 are separated by 66 nucleotides
GFF3567 - hypothetical protein, at 151,506 to 152,666
GFF3567
GFF3568 - hypothetical protein, at 152,678 to 153,211
GFF3568
GFF3569 - hypothetical protein, at 153,214 to 155,523
GFF3569
GFF3570 - UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase, at 155,590 to 156,981
GFF3570
Position (kb) 153
154
155
156 Strain fitness (log2 ratio) -1
0
1
2 at 152.338 kb on - strand, within GFF3567 at 152.485 kb on - strand, within GFF3567 at 152.485 kb on - strand, within GFF3567 at 152.485 kb on - strand, within GFF3567 at 152.527 kb on - strand, within GFF3567 at 152.665 kb on - strand at 152.990 kb on + strand, within GFF3568 at 152.991 kb on - strand, within GFF3568 at 152.991 kb on - strand, within GFF3568 at 153.505 kb on + strand, within GFF3569 at 153.756 kb on + strand, within GFF3569 at 153.862 kb on - strand, within GFF3569 at 154.290 kb on + strand, within GFF3569 at 154.291 kb on - strand, within GFF3569 at 154.351 kb on + strand, within GFF3569 at 154.487 kb on - strand, within GFF3569 at 155.344 kb on + strand at 155.344 kb on + strand at 155.344 kb on + strand at 155.344 kb on + strand at 155.344 kb on + strand at 155.345 kb on - strand at 155.345 kb on - strand at 155.470 kb on + strand at 155.498 kb on - strand at 155.603 kb on - strand at 155.992 kb on + strand, within GFF3570 at 155.992 kb on + strand, within GFF3570 at 155.992 kb on + strand, within GFF3570 at 155.993 kb on - strand, within GFF3570 at 155.993 kb on - strand, within GFF3570 at 156.186 kb on + strand, within GFF3570 at 156.211 kb on + strand, within GFF3570 at 156.257 kb on - strand, within GFF3570
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 152,338 - GFF3567 0.72 +1.9 152,485 - GFF3567 0.84 +0.0 152,485 - GFF3567 0.84 -0.6 152,485 - GFF3567 0.84 -0.1 152,527 - GFF3567 0.88 -1.7 152,665 - -0.6 152,990 + GFF3568 0.58 -0.5 152,991 - GFF3568 0.59 +2.3 152,991 - GFF3568 0.59 +0.5 153,505 + GFF3569 0.13 -0.8 153,756 + GFF3569 0.23 +2.1 153,862 - GFF3569 0.28 +1.0 154,290 + GFF3569 0.47 +0.3 154,291 - GFF3569 0.47 -0.7 154,351 + GFF3569 0.49 +0.4 154,487 - GFF3569 0.55 +0.0 155,344 + -0.6 155,344 + -0.5 155,344 + -1.6 155,344 + -0.9 155,344 + -0.1 155,345 - -0.0 155,345 - +0.6 155,470 + -0.0 155,498 - +0.6 155,603 - -0.8 155,992 + GFF3570 0.29 -0.0 155,992 + GFF3570 0.29 -0.7 155,992 + GFF3570 0.29 +0.4 155,993 - GFF3570 0.29 +0.5 155,993 - GFF3570 0.29 -0.3 156,186 + GFF3570 0.43 -0.3 156,211 + GFF3570 0.45 -0.1 156,257 - GFF3570 0.48 -0.1
Or see this region's nucleotide sequence