Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3363 and GFF3364 are separated by 317 nucleotides GFF3364 and GFF3365 are separated by 127 nucleotides
GFF3363 - HTH-type transcriptional regulator DmlR, at 370,220 to 371,149
GFF3363
GFF3364 - hypothetical protein, at 371,467 to 372,201
GFF3364
GFF3365 - Putative niacin/nicotinamide transporter NaiP, at 372,329 to 373,711
GFF3365
Position (kb) 371
372
373 Strain fitness (log2 ratio) -2
-1
0
1
2 at 370.734 kb on - strand, within GFF3363 at 370.796 kb on + strand, within GFF3363 at 370.796 kb on + strand, within GFF3363 at 370.796 kb on + strand, within GFF3363 at 370.796 kb on + strand, within GFF3363 at 370.797 kb on - strand, within GFF3363 at 370.797 kb on - strand, within GFF3363 at 370.909 kb on - strand, within GFF3363 at 370.938 kb on - strand, within GFF3363 at 370.938 kb on - strand, within GFF3363 at 371.059 kb on + strand at 371.147 kb on + strand at 371.232 kb on + strand at 371.232 kb on + strand at 371.232 kb on + strand at 371.233 kb on - strand at 371.233 kb on - strand at 371.234 kb on + strand at 371.234 kb on + strand at 371.234 kb on + strand at 371.234 kb on + strand at 371.235 kb on - strand at 371.235 kb on - strand at 371.235 kb on - strand at 371.237 kb on + strand at 371.315 kb on - strand at 371.443 kb on + strand at 371.443 kb on + strand at 371.444 kb on - strand at 371.466 kb on + strand at 371.466 kb on + strand at 371.466 kb on + strand at 371.466 kb on + strand at 371.466 kb on + strand at 371.466 kb on + strand at 371.467 kb on - strand at 371.467 kb on - strand at 371.467 kb on - strand at 371.467 kb on - strand at 371.857 kb on - strand, within GFF3364 at 371.857 kb on - strand, within GFF3364 at 371.876 kb on - strand, within GFF3364 at 372.199 kb on + strand at 372.199 kb on + strand at 372.334 kb on + strand at 372.334 kb on + strand at 372.334 kb on + strand at 372.334 kb on + strand at 372.335 kb on - strand at 372.335 kb on - strand at 372.335 kb on - strand at 372.335 kb on - strand at 372.347 kb on - strand at 372.635 kb on + strand, within GFF3365 at 372.635 kb on + strand, within GFF3365 at 372.636 kb on - strand, within GFF3365 at 372.770 kb on + strand, within GFF3365 at 372.771 kb on - strand, within GFF3365 at 372.830 kb on + strand, within GFF3365 at 372.831 kb on - strand, within GFF3365 at 372.831 kb on - strand, within GFF3365 at 372.831 kb on - strand, within GFF3365 at 372.831 kb on - strand, within GFF3365 at 372.831 kb on - strand, within GFF3365 at 372.862 kb on + strand, within GFF3365 at 372.891 kb on + strand, within GFF3365 at 373.110 kb on - strand, within GFF3365
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 370,734 - GFF3363 0.55 +0.3 370,796 + GFF3363 0.62 +0.2 370,796 + GFF3363 0.62 -1.6 370,796 + GFF3363 0.62 +0.5 370,796 + GFF3363 0.62 +0.4 370,797 - GFF3363 0.62 -0.1 370,797 - GFF3363 0.62 -0.5 370,909 - GFF3363 0.74 +0.5 370,938 - GFF3363 0.77 -0.6 370,938 - GFF3363 0.77 +0.9 371,059 + -0.1 371,147 + -0.8 371,232 + +0.3 371,232 + +1.5 371,232 + -2.0 371,233 - +0.9 371,233 - +1.1 371,234 + -0.3 371,234 + -1.1 371,234 + -0.1 371,234 + +0.2 371,235 - +0.2 371,235 - +0.1 371,235 - +0.9 371,237 + -0.2 371,315 - -0.5 371,443 + +0.3 371,443 + +1.3 371,444 - +0.0 371,466 + +0.6 371,466 + +1.9 371,466 + +1.1 371,466 + -0.2 371,466 + -1.7 371,466 + -1.1 371,467 - -0.2 371,467 - +0.7 371,467 - -0.1 371,467 - -0.4 371,857 - GFF3364 0.53 +0.2 371,857 - GFF3364 0.53 -0.4 371,876 - GFF3364 0.56 +0.9 372,199 + -0.3 372,199 + -0.0 372,334 + -0.9 372,334 + +0.6 372,334 + -0.8 372,334 + -0.5 372,335 - +0.8 372,335 - -0.3 372,335 - -0.5 372,335 - -0.4 372,347 - -1.0 372,635 + GFF3365 0.22 -1.3 372,635 + GFF3365 0.22 -0.4 372,636 - GFF3365 0.22 +0.2 372,770 + GFF3365 0.32 -0.6 372,771 - GFF3365 0.32 -0.1 372,830 + GFF3365 0.36 +1.1 372,831 - GFF3365 0.36 -0.3 372,831 - GFF3365 0.36 -0.4 372,831 - GFF3365 0.36 +0.5 372,831 - GFF3365 0.36 -0.1 372,831 - GFF3365 0.36 +0.2 372,862 + GFF3365 0.39 -0.4 372,891 + GFF3365 0.41 -1.7 373,110 - GFF3365 0.56 +1.3
Or see this region's nucleotide sequence