Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3194 and GFF3195 are separated by 231 nucleotides GFF3195 and GFF3196 are separated by 134 nucleotides
GFF3194 - hypothetical protein, at 160,312 to 161,022
GFF3194
GFF3195 - hypothetical protein, at 161,254 to 162,765
GFF3195
GFF3196 - Phosphoserine phosphatase SerB2, at 162,900 to 164,114
GFF3196
Position (kb) 161
162
163 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 160.256 kb on + strand at 160.256 kb on + strand at 160.256 kb on + strand at 160.257 kb on - strand at 160.257 kb on - strand at 160.257 kb on - strand at 160.260 kb on + strand at 160.260 kb on + strand at 160.261 kb on - strand at 160.322 kb on + strand at 160.396 kb on + strand, within GFF3194 at 160.397 kb on - strand, within GFF3194 at 160.473 kb on - strand, within GFF3194 at 160.473 kb on - strand, within GFF3194 at 160.767 kb on + strand, within GFF3194 at 160.768 kb on - strand, within GFF3194 at 161.087 kb on + strand at 161.088 kb on - strand at 161.153 kb on + strand at 161.189 kb on + strand at 161.189 kb on + strand at 161.249 kb on - strand at 161.255 kb on + strand at 161.256 kb on - strand at 161.256 kb on - strand at 161.326 kb on + strand at 161.624 kb on + strand, within GFF3195 at 161.624 kb on + strand, within GFF3195 at 161.625 kb on - strand, within GFF3195 at 161.699 kb on + strand, within GFF3195 at 161.700 kb on - strand, within GFF3195 at 161.733 kb on - strand, within GFF3195 at 161.810 kb on - strand, within GFF3195 at 162.004 kb on - strand, within GFF3195 at 162.004 kb on - strand, within GFF3195 at 162.804 kb on - strand at 162.806 kb on - strand at 162.806 kb on - strand at 162.864 kb on + strand at 162.920 kb on + strand at 162.921 kb on - strand at 163.155 kb on + strand, within GFF3196 at 163.155 kb on + strand, within GFF3196 at 163.263 kb on + strand, within GFF3196 at 163.264 kb on - strand, within GFF3196 at 163.264 kb on - strand, within GFF3196 at 163.764 kb on + strand, within GFF3196 at 163.764 kb on + strand, within GFF3196
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 160,256 + +1.5 160,256 + -0.3 160,256 + -1.6 160,257 - +0.3 160,257 - -2.3 160,257 - +0.5 160,260 + -0.4 160,260 + +0.2 160,261 - +0.2 160,322 + +0.4 160,396 + GFF3194 0.12 +0.7 160,397 - GFF3194 0.12 +0.5 160,473 - GFF3194 0.23 -0.9 160,473 - GFF3194 0.23 +0.4 160,767 + GFF3194 0.64 -0.8 160,768 - GFF3194 0.64 -0.3 161,087 + -0.7 161,088 - +0.2 161,153 + -0.2 161,189 + +0.4 161,189 + +0.3 161,249 - -0.8 161,255 + -1.0 161,256 - +0.1 161,256 - -0.0 161,326 + +2.3 161,624 + GFF3195 0.24 +0.9 161,624 + GFF3195 0.24 +1.9 161,625 - GFF3195 0.25 +0.8 161,699 + GFF3195 0.29 -0.5 161,700 - GFF3195 0.29 +1.2 161,733 - GFF3195 0.32 -0.0 161,810 - GFF3195 0.37 -0.2 162,004 - GFF3195 0.50 -0.0 162,004 - GFF3195 0.50 -0.0 162,804 - +0.2 162,806 - -1.9 162,806 - +1.1 162,864 + -0.2 162,920 + -1.8 162,921 - -0.5 163,155 + GFF3196 0.21 -1.4 163,155 + GFF3196 0.21 -2.2 163,263 + GFF3196 0.30 -3.7 163,264 - GFF3196 0.30 -1.5 163,264 - GFF3196 0.30 -4.3 163,764 + GFF3196 0.71 -4.2 163,764 + GFF3196 0.71 -0.5
Or see this region's nucleotide sequence