Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2913 and GFF2914 are separated by 285 nucleotides GFF2914 and GFF2915 are separated by 15 nucleotides GFF2915 and GFF2916 are separated by 4 nucleotides GFF2916 and GFF2917 are separated by 253 nucleotides
GFF2913 - L-threonine dehydratase biosynthetic IlvA, at 281,142 to 282,155
GFF2913
GFF2914 - hypothetical protein, at 282,441 to 282,620
GFF2914
GFF2915 - Sensor protein RstB, at 282,636 to 283,937
GFF2915
GFF2916 - Alkaline phosphatase synthesis transcriptional regulatory protein PhoP, at 283,942 to 284,643
GFF2916
GFF2917 - Multidrug export protein AcrE, at 284,897 to 286,054
GFF2917
Position (kb) 282
283
284 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 281.828 kb on + strand, within GFF2913 at 281.829 kb on - strand, within GFF2913 at 281.829 kb on - strand, within GFF2913 at 281.880 kb on + strand, within GFF2913 at 281.880 kb on + strand, within GFF2913 at 281.962 kb on + strand, within GFF2913 at 281.962 kb on + strand, within GFF2913 at 281.962 kb on + strand, within GFF2913 at 281.962 kb on + strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 281.963 kb on - strand, within GFF2913 at 282.085 kb on + strand at 282.085 kb on + strand at 282.085 kb on + strand at 282.115 kb on + strand at 282.115 kb on + strand at 282.116 kb on - strand at 282.197 kb on + strand at 282.197 kb on + strand at 282.197 kb on + strand at 282.198 kb on - strand at 282.211 kb on + strand at 282.241 kb on + strand at 282.267 kb on - strand at 282.267 kb on - strand at 282.269 kb on + strand at 282.269 kb on + strand at 282.269 kb on + strand at 282.269 kb on + strand at 282.269 kb on + strand at 282.270 kb on - strand at 282.270 kb on - strand at 282.447 kb on - strand at 282.572 kb on + strand, within GFF2914 at 282.572 kb on + strand, within GFF2914 at 282.573 kb on - strand, within GFF2914 at 282.622 kb on - strand at 282.705 kb on - strand at 282.858 kb on + strand, within GFF2915 at 283.126 kb on + strand, within GFF2915 at 283.522 kb on + strand, within GFF2915 at 283.522 kb on + strand, within GFF2915 at 283.522 kb on + strand, within GFF2915 at 283.522 kb on + strand, within GFF2915 at 283.523 kb on - strand, within GFF2915 at 283.593 kb on + strand, within GFF2915 at 283.819 kb on - strand at 283.825 kb on + strand at 283.825 kb on + strand at 283.825 kb on + strand at 283.825 kb on + strand at 283.825 kb on + strand at 283.826 kb on - strand at 283.826 kb on - strand at 283.876 kb on + strand at 283.876 kb on + strand at 283.877 kb on - strand at 283.877 kb on - strand at 283.877 kb on - strand at 283.877 kb on - strand at 283.891 kb on + strand at 283.973 kb on + strand at 283.974 kb on - strand at 284.073 kb on + strand, within GFF2916 at 284.073 kb on + strand, within GFF2916 at 284.165 kb on + strand, within GFF2916 at 284.165 kb on + strand, within GFF2916 at 284.166 kb on - strand, within GFF2916 at 284.166 kb on - strand, within GFF2916 at 284.166 kb on - strand, within GFF2916 at 284.301 kb on + strand, within GFF2916 at 284.301 kb on + strand, within GFF2916 at 284.301 kb on + strand, within GFF2916 at 284.301 kb on + strand, within GFF2916 at 284.302 kb on - strand, within GFF2916 at 284.302 kb on - strand, within GFF2916 at 284.349 kb on - strand, within GFF2916 at 284.518 kb on - strand, within GFF2916 at 284.568 kb on - strand, within GFF2916 at 284.586 kb on - strand at 284.776 kb on + strand at 284.776 kb on + strand at 284.777 kb on - strand at 284.777 kb on - strand at 284.778 kb on + strand at 284.778 kb on + strand at 284.778 kb on + strand at 284.778 kb on + strand at 284.778 kb on + strand at 284.779 kb on - strand at 284.779 kb on - strand at 284.779 kb on - strand at 284.779 kb on - strand at 284.779 kb on - strand at 284.779 kb on - strand at 284.779 kb on - strand at 284.779 kb on - strand at 284.779 kb on - strand at 284.779 kb on - strand at 284.810 kb on - strand at 284.830 kb on + strand at 284.830 kb on + strand at 284.831 kb on - strand at 284.831 kb on - strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.894 kb on + strand at 284.895 kb on - strand at 284.895 kb on - strand at 284.895 kb on - strand at 284.895 kb on - strand at 284.895 kb on - strand at 284.895 kb on - strand at 284.895 kb on - strand at 284.895 kb on - strand at 284.895 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 281,828 + GFF2913 0.68 +0.1 281,829 - GFF2913 0.68 +0.7 281,829 - GFF2913 0.68 -0.6 281,880 + GFF2913 0.73 -0.5 281,880 + GFF2913 0.73 +1.1 281,962 + GFF2913 0.81 -0.1 281,962 + GFF2913 0.81 +0.3 281,962 + GFF2913 0.81 +0.3 281,962 + GFF2913 0.81 -0.2 281,963 - GFF2913 0.81 +1.1 281,963 - GFF2913 0.81 -0.1 281,963 - GFF2913 0.81 +0.2 281,963 - GFF2913 0.81 -3.5 281,963 - GFF2913 0.81 +0.9 281,963 - GFF2913 0.81 -0.8 281,963 - GFF2913 0.81 +0.1 281,963 - GFF2913 0.81 -1.0 281,963 - GFF2913 0.81 +0.4 281,963 - GFF2913 0.81 -0.9 281,963 - GFF2913 0.81 +0.7 282,085 + -0.2 282,085 + -0.4 282,085 + +0.9 282,115 + +0.3 282,115 + -2.0 282,116 - +0.9 282,197 + -0.6 282,197 + +1.2 282,197 + -0.5 282,198 - -2.3 282,211 + +0.8 282,241 + +0.2 282,267 - +0.3 282,267 - +0.0 282,269 + -0.5 282,269 + +0.5 282,269 + -1.5 282,269 + -0.4 282,269 + -0.7 282,270 - -0.7 282,270 - -0.6 282,447 - -0.1 282,572 + GFF2914 0.73 -0.3 282,572 + GFF2914 0.73 +0.3 282,573 - GFF2914 0.73 -0.2 282,622 - -0.2 282,705 - -0.5 282,858 + GFF2915 0.17 -0.1 283,126 + GFF2915 0.38 +1.4 283,522 + GFF2915 0.68 +0.6 283,522 + GFF2915 0.68 -0.5 283,522 + GFF2915 0.68 +0.8 283,522 + GFF2915 0.68 -0.5 283,523 - GFF2915 0.68 -0.2 283,593 + GFF2915 0.74 +0.7 283,819 - +0.1 283,825 + -1.3 283,825 + -0.9 283,825 + -1.5 283,825 + +1.2 283,825 + -0.2 283,826 - +0.4 283,826 - -0.5 283,876 + +0.2 283,876 + +0.4 283,877 - +0.5 283,877 - +1.0 283,877 - +1.1 283,877 - +0.4 283,891 + -1.5 283,973 + +0.4 283,974 - -0.5 284,073 + GFF2916 0.19 +0.4 284,073 + GFF2916 0.19 -0.3 284,165 + GFF2916 0.32 -0.7 284,165 + GFF2916 0.32 -0.2 284,166 - GFF2916 0.32 +1.5 284,166 - GFF2916 0.32 -0.1 284,166 - GFF2916 0.32 +0.7 284,301 + GFF2916 0.51 +0.1 284,301 + GFF2916 0.51 -0.2 284,301 + GFF2916 0.51 -1.3 284,301 + GFF2916 0.51 -0.3 284,302 - GFF2916 0.51 -0.3 284,302 - GFF2916 0.51 +0.2 284,349 - GFF2916 0.58 -0.6 284,518 - GFF2916 0.82 -0.7 284,568 - GFF2916 0.89 -0.4 284,586 - -0.1 284,776 + +2.1 284,776 + +1.1 284,777 - -1.6 284,777 - +0.9 284,778 + +0.1 284,778 + -1.0 284,778 + +0.4 284,778 + -0.8 284,778 + -0.1 284,779 - +0.5 284,779 - -0.1 284,779 - +1.9 284,779 - -1.0 284,779 - +0.7 284,779 - +0.5 284,779 - +0.3 284,779 - -0.1 284,779 - -0.5 284,779 - +1.1 284,810 - -0.1 284,830 + +0.8 284,830 + -0.3 284,831 - +0.5 284,831 - -2.0 284,894 + +0.7 284,894 + +1.7 284,894 + -0.5 284,894 + -0.5 284,894 + -0.2 284,894 + +0.4 284,894 + -1.2 284,894 + -1.9 284,894 + +0.6 284,894 + -0.5 284,894 + -0.5 284,894 + +1.4 284,894 + +0.4 284,894 + +0.5 284,894 + -1.4 284,894 + +0.3 284,895 - -0.8 284,895 - +1.3 284,895 - +0.4 284,895 - -0.9 284,895 - +0.3 284,895 - -0.3 284,895 - -0.7 284,895 - -0.1 284,895 - -0.8
Or see this region's nucleotide sequence