Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2838 and GFF2839 are separated by 87 nucleotides GFF2839 and GFF2840 are separated by 42 nucleotides
GFF2838 - General stress protein 39, at 186,093 to 186,950
GFF2838
GFF2839 - Inner membrane protein YohC, at 187,038 to 187,649
GFF2839
GFF2840 - hypothetical protein, at 187,692 to 189,035
GFF2840
Position (kb) 187
188 Strain fitness (log2 ratio) -2
-1
0
1
2 at 186.103 kb on - strand at 186.192 kb on + strand, within GFF2838 at 186.193 kb on - strand, within GFF2838 at 186.193 kb on - strand, within GFF2838 at 186.193 kb on - strand, within GFF2838 at 186.253 kb on + strand, within GFF2838 at 186.253 kb on + strand, within GFF2838 at 186.254 kb on - strand, within GFF2838 at 186.254 kb on - strand, within GFF2838 at 186.254 kb on - strand, within GFF2838 at 186.309 kb on + strand, within GFF2838 at 186.309 kb on + strand, within GFF2838 at 186.309 kb on + strand, within GFF2838 at 186.310 kb on - strand, within GFF2838 at 186.310 kb on - strand, within GFF2838 at 186.310 kb on - strand, within GFF2838 at 186.548 kb on + strand, within GFF2838 at 186.548 kb on + strand, within GFF2838 at 186.548 kb on + strand, within GFF2838 at 186.548 kb on + strand, within GFF2838 at 186.549 kb on - strand, within GFF2838 at 186.549 kb on - strand, within GFF2838 at 186.549 kb on - strand, within GFF2838 at 186.663 kb on + strand, within GFF2838 at 186.664 kb on - strand, within GFF2838 at 186.870 kb on + strand at 186.871 kb on - strand at 186.871 kb on - strand at 186.871 kb on - strand at 186.900 kb on + strand at 186.900 kb on + strand at 186.900 kb on + strand at 186.900 kb on + strand at 186.900 kb on + strand at 186.900 kb on + strand at 186.900 kb on + strand at 186.900 kb on + strand at 186.900 kb on + strand at 186.900 kb on + strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.901 kb on - strand at 186.902 kb on + strand at 186.902 kb on + strand at 186.902 kb on + strand at 186.902 kb on + strand at 186.902 kb on + strand at 186.903 kb on - strand at 186.903 kb on - strand at 186.903 kb on - strand at 186.997 kb on - strand at 186.997 kb on - strand at 186.997 kb on - strand at 187.002 kb on + strand at 187.003 kb on - strand at 187.125 kb on + strand, within GFF2839 at 187.266 kb on + strand, within GFF2839 at 187.267 kb on - strand, within GFF2839 at 187.374 kb on + strand, within GFF2839 at 187.375 kb on - strand, within GFF2839 at 187.375 kb on - strand, within GFF2839 at 187.375 kb on - strand, within GFF2839 at 187.464 kb on + strand, within GFF2839 at 187.464 kb on + strand, within GFF2839 at 187.533 kb on + strand, within GFF2839 at 188.389 kb on - strand, within GFF2840 at 188.389 kb on - strand, within GFF2840 at 188.418 kb on + strand, within GFF2840 at 188.419 kb on - strand, within GFF2840
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 186,103 - -0.4 186,192 + GFF2838 0.12 -1.2 186,193 - GFF2838 0.12 -1.3 186,193 - GFF2838 0.12 -0.5 186,193 - GFF2838 0.12 +1.6 186,253 + GFF2838 0.19 +1.3 186,253 + GFF2838 0.19 -0.0 186,254 - GFF2838 0.19 -1.1 186,254 - GFF2838 0.19 -0.4 186,254 - GFF2838 0.19 +0.3 186,309 + GFF2838 0.25 +0.4 186,309 + GFF2838 0.25 -0.1 186,309 + GFF2838 0.25 -0.3 186,310 - GFF2838 0.25 -0.2 186,310 - GFF2838 0.25 -0.1 186,310 - GFF2838 0.25 -0.3 186,548 + GFF2838 0.53 +0.7 186,548 + GFF2838 0.53 +0.1 186,548 + GFF2838 0.53 +0.1 186,548 + GFF2838 0.53 -0.2 186,549 - GFF2838 0.53 -1.0 186,549 - GFF2838 0.53 -0.1 186,549 - GFF2838 0.53 +1.1 186,663 + GFF2838 0.66 -0.9 186,664 - GFF2838 0.67 +0.8 186,870 + +1.0 186,871 - -0.1 186,871 - -0.9 186,871 - -0.3 186,900 + +1.1 186,900 + -1.3 186,900 + +0.7 186,900 + -0.9 186,900 + +0.2 186,900 + +0.4 186,900 + +1.7 186,900 + -0.1 186,900 + +0.1 186,900 + +0.1 186,901 - +0.5 186,901 - -0.1 186,901 - -0.3 186,901 - +0.0 186,901 - +0.8 186,901 - +0.4 186,901 - +0.0 186,901 - -0.5 186,901 - -0.3 186,901 - +1.0 186,901 - +0.1 186,901 - -0.5 186,902 + -1.3 186,902 + +0.7 186,902 + +0.0 186,902 + +1.4 186,902 + -0.5 186,903 - -1.6 186,903 - +0.1 186,903 - +0.7 186,997 - -0.1 186,997 - -0.2 186,997 - +1.4 187,002 + -1.3 187,003 - -1.1 187,125 + GFF2839 0.14 +1.3 187,266 + GFF2839 0.37 -0.9 187,267 - GFF2839 0.37 +0.3 187,374 + GFF2839 0.55 +1.9 187,375 - GFF2839 0.55 -0.1 187,375 - GFF2839 0.55 +0.3 187,375 - GFF2839 0.55 +1.1 187,464 + GFF2839 0.70 -1.9 187,464 + GFF2839 0.70 +0.0 187,533 + GFF2839 0.81 -0.0 188,389 - GFF2840 0.52 -0.6 188,389 - GFF2840 0.52 -1.1 188,418 + GFF2840 0.54 -0.0 188,419 - GFF2840 0.54 -0.1
Or see this region's nucleotide sequence