Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2690 and GFF2691 overlap by 4 nucleotides GFF2691 and GFF2692 are separated by 119 nucleotides GFF2692 and GFF2693 are separated by 11 nucleotides GFF2693 and GFF2694 are separated by 126 nucleotides GFF2694 and GFF2695 are separated by 167 nucleotides
GFF2690 - Undecaprenyl-diphosphatase, at 11,892 to 12,722
GFF2690
GFF2691 - hypothetical protein, at 12,719 to 13,147
GFF2691
GFF2692 - hypothetical protein, at 13,267 to 13,611
GFF2692
GFF2693 - HTH-type transcriptional regulator DmlR, at 13,623 to 14,531
GFF2693
GFF2694 - FMN-dependent NADH-azoreductase 1, at 14,658 to 15,269
GFF2694
GFF2695 - hypothetical protein, at 15,437 to 16,474
GFF2695
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1 at 12.627 kb on + strand, within GFF2690 at 12.627 kb on + strand, within GFF2690 at 12.627 kb on + strand, within GFF2690 at 12.627 kb on + strand, within GFF2690 at 12.627 kb on + strand, within GFF2690 at 12.628 kb on - strand, within GFF2690 at 12.628 kb on - strand, within GFF2690 at 12.628 kb on - strand, within GFF2690 at 12.628 kb on - strand, within GFF2690 at 13.050 kb on + strand, within GFF2691 at 13.050 kb on + strand, within GFF2691 at 13.051 kb on - strand, within GFF2691 at 13.145 kb on + strand at 13.146 kb on - strand at 13.146 kb on - strand at 13.146 kb on - strand at 13.146 kb on - strand at 13.268 kb on + strand at 13.269 kb on - strand at 13.296 kb on + strand at 13.489 kb on + strand, within GFF2692 at 13.489 kb on + strand, within GFF2692 at 13.490 kb on - strand, within GFF2692 at 13.490 kb on - strand, within GFF2692 at 13.490 kb on - strand, within GFF2692 at 13.490 kb on - strand, within GFF2692 at 13.553 kb on + strand, within GFF2692 at 13.553 kb on + strand, within GFF2692 at 13.554 kb on - strand, within GFF2692 at 13.626 kb on + strand at 13.627 kb on - strand at 13.627 kb on - strand at 13.695 kb on + strand at 13.818 kb on - strand, within GFF2693 at 14.338 kb on + strand, within GFF2693 at 14.338 kb on + strand, within GFF2693 at 14.339 kb on - strand, within GFF2693 at 14.339 kb on - strand, within GFF2693 at 14.339 kb on - strand, within GFF2693 at 14.506 kb on + strand at 14.507 kb on - strand at 14.507 kb on - strand at 14.509 kb on + strand at 14.510 kb on - strand at 14.510 kb on - strand at 14.510 kb on - strand at 14.510 kb on - strand at 14.550 kb on + strand at 14.550 kb on + strand at 14.607 kb on + strand at 14.969 kb on + strand, within GFF2694 at 14.970 kb on - strand, within GFF2694 at 14.970 kb on - strand, within GFF2694 at 15.123 kb on + strand, within GFF2694 at 15.123 kb on + strand, within GFF2694 at 15.124 kb on - strand, within GFF2694 at 15.124 kb on - strand, within GFF2694 at 15.124 kb on - strand, within GFF2694 at 15.267 kb on + strand at 15.278 kb on + strand at 15.279 kb on - strand at 15.300 kb on + strand at 15.301 kb on - strand at 15.319 kb on + strand at 15.320 kb on - strand at 15.368 kb on + strand at 15.369 kb on - strand at 15.369 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 12,627 + GFF2690 0.88 -0.3 12,627 + GFF2690 0.88 -0.6 12,627 + GFF2690 0.88 -0.9 12,627 + GFF2690 0.88 -1.2 12,627 + GFF2690 0.88 -0.1 12,628 - GFF2690 0.89 -0.1 12,628 - GFF2690 0.89 -1.1 12,628 - GFF2690 0.89 -0.0 12,628 - GFF2690 0.89 -1.0 13,050 + GFF2691 0.77 -1.2 13,050 + GFF2691 0.77 -0.4 13,051 - GFF2691 0.77 +0.6 13,145 + +0.9 13,146 - +0.3 13,146 - +0.7 13,146 - +0.4 13,146 - +0.5 13,268 + +0.3 13,269 - +0.3 13,296 + +0.0 13,489 + GFF2692 0.64 +0.6 13,489 + GFF2692 0.64 +0.8 13,490 - GFF2692 0.65 -0.4 13,490 - GFF2692 0.65 -0.0 13,490 - GFF2692 0.65 +0.0 13,490 - GFF2692 0.65 -0.5 13,553 + GFF2692 0.83 -0.1 13,553 + GFF2692 0.83 +0.3 13,554 - GFF2692 0.83 -0.2 13,626 + -0.1 13,627 - -1.4 13,627 - -2.1 13,695 + -0.2 13,818 - GFF2693 0.21 +1.0 14,338 + GFF2693 0.79 +0.1 14,338 + GFF2693 0.79 -1.0 14,339 - GFF2693 0.79 -0.6 14,339 - GFF2693 0.79 -1.5 14,339 - GFF2693 0.79 -0.9 14,506 + +0.5 14,507 - -0.5 14,507 - -0.6 14,509 + -0.0 14,510 - -0.2 14,510 - +1.1 14,510 - +0.9 14,510 - -0.7 14,550 + +0.3 14,550 + -0.8 14,607 + +0.1 14,969 + GFF2694 0.51 -0.3 14,970 - GFF2694 0.51 -1.0 14,970 - GFF2694 0.51 +0.5 15,123 + GFF2694 0.76 +0.0 15,123 + GFF2694 0.76 +0.7 15,124 - GFF2694 0.76 +0.0 15,124 - GFF2694 0.76 -0.4 15,124 - GFF2694 0.76 -0.0 15,267 + -0.2 15,278 + -0.5 15,279 - +0.2 15,300 + -1.2 15,301 - -0.8 15,319 + -0.0 15,320 - +0.8 15,368 + -0.4 15,369 - +0.3 15,369 - +0.8
Or see this region's nucleotide sequence