Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2555 and GFF2556 are separated by 1 nucleotides GFF2556 and GFF2557 are separated by 130 nucleotides GFF2557 and GFF2558 are separated by 52 nucleotides
GFF2555 - Adenosylcobalamin/alpha-ribazole phosphatase, at 345,968 to 346,543
GFF2555
GFF2556 - Adenosylcobinamide-GDP ribazoletransferase, at 346,545 to 347,267
GFF2556
GFF2557 - hypothetical protein, at 347,398 to 347,802
GFF2557
GFF2558 - L-lactate transporter, at 347,855 to 349,063
GFF2558
Position (kb) 347
348 Strain fitness (log2 ratio) -2
-1
0
1 at 346.943 kb on + strand, within GFF2556 at 346.944 kb on - strand, within GFF2556 at 346.944 kb on - strand, within GFF2556 at 347.007 kb on - strand, within GFF2556 at 347.007 kb on - strand, within GFF2556 at 347.007 kb on - strand, within GFF2556 at 347.014 kb on - strand, within GFF2556 at 347.014 kb on - strand, within GFF2556 at 347.014 kb on - strand, within GFF2556 at 347.270 kb on + strand at 347.271 kb on - strand at 347.271 kb on - strand at 347.271 kb on - strand at 347.271 kb on - strand at 347.273 kb on + strand at 347.274 kb on - strand at 347.274 kb on - strand at 347.347 kb on + strand at 347.347 kb on + strand at 347.348 kb on - strand at 347.348 kb on - strand at 347.359 kb on + strand at 347.359 kb on + strand at 347.359 kb on + strand at 347.360 kb on - strand at 347.360 kb on - strand at 347.369 kb on + strand at 347.384 kb on + strand at 347.504 kb on - strand, within GFF2557 at 347.656 kb on - strand, within GFF2557 at 347.850 kb on + strand at 348.564 kb on - strand, within GFF2558 at 348.644 kb on + strand, within GFF2558 at 348.644 kb on + strand, within GFF2558 at 348.644 kb on + strand, within GFF2558 at 348.645 kb on - strand, within GFF2558 at 348.645 kb on - strand, within GFF2558 at 348.645 kb on - strand, within GFF2558 at 348.701 kb on + strand, within GFF2558 at 348.701 kb on + strand, within GFF2558 at 348.701 kb on + strand, within GFF2558 at 348.701 kb on + strand, within GFF2558 at 348.701 kb on + strand, within GFF2558 at 348.702 kb on - strand, within GFF2558 at 348.702 kb on - strand, within GFF2558 at 348.702 kb on - strand, within GFF2558 at 348.702 kb on - strand, within GFF2558 at 348.702 kb on - strand, within GFF2558 at 348.764 kb on + strand, within GFF2558 at 348.765 kb on - strand, within GFF2558
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 346,943 + GFF2556 0.55 -0.5 346,944 - GFF2556 0.55 +0.6 346,944 - GFF2556 0.55 -0.1 347,007 - GFF2556 0.64 -0.2 347,007 - GFF2556 0.64 -0.1 347,007 - GFF2556 0.64 +0.9 347,014 - GFF2556 0.65 +0.6 347,014 - GFF2556 0.65 -1.4 347,014 - GFF2556 0.65 +0.0 347,270 + +0.2 347,271 - -0.6 347,271 - -0.3 347,271 - +0.1 347,271 - +0.2 347,273 + -0.3 347,274 - +0.4 347,274 - -0.4 347,347 + -0.3 347,347 + -0.0 347,348 - +0.1 347,348 - -0.4 347,359 + -0.6 347,359 + -0.3 347,359 + -0.1 347,360 - -0.4 347,360 - +0.4 347,369 + +1.0 347,384 + -0.2 347,504 - GFF2557 0.26 +0.4 347,656 - GFF2557 0.64 +0.3 347,850 + -0.6 348,564 - GFF2558 0.59 -0.9 348,644 + GFF2558 0.65 -2.3 348,644 + GFF2558 0.65 +0.2 348,644 + GFF2558 0.65 -1.9 348,645 - GFF2558 0.65 -0.5 348,645 - GFF2558 0.65 -0.2 348,645 - GFF2558 0.65 -0.6 348,701 + GFF2558 0.70 -0.6 348,701 + GFF2558 0.70 +1.1 348,701 + GFF2558 0.70 -0.2 348,701 + GFF2558 0.70 +0.5 348,701 + GFF2558 0.70 -0.6 348,702 - GFF2558 0.70 +0.4 348,702 - GFF2558 0.70 +1.1 348,702 - GFF2558 0.70 +0.1 348,702 - GFF2558 0.70 -0.2 348,702 - GFF2558 0.70 +0.1 348,764 + GFF2558 0.75 -0.0 348,765 - GFF2558 0.75 -0.2
Or see this region's nucleotide sequence