Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2542 and GFF2543 are separated by 191 nucleotides GFF2543 and GFF2544 are separated by 215 nucleotides GFF2544 and GFF2545 are separated by 131 nucleotides
GFF2542 - DnaA regulatory inactivator Hda, at 333,447 to 334,151
GFF2542
GFF2543 - Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase, at 334,343 to 334,960
GFF2543
GFF2544 - hypothetical protein, at 335,176 to 335,712
GFF2544
GFF2545 - hypothetical protein, at 335,844 to 337,157
GFF2545
Position (kb) 334
335 Strain fitness (log2 ratio) -2
-1
0
1 at 333.386 kb on + strand at 333.386 kb on + strand at 333.416 kb on + strand at 334.149 kb on + strand at 334.150 kb on - strand at 334.150 kb on - strand at 334.152 kb on + strand at 334.153 kb on - strand at 334.153 kb on - strand at 334.153 kb on - strand at 334.224 kb on - strand at 334.224 kb on - strand at 334.232 kb on - strand at 334.232 kb on - strand at 334.232 kb on - strand at 334.237 kb on + strand at 334.262 kb on - strand at 334.302 kb on + strand at 334.317 kb on + strand at 334.317 kb on + strand at 334.317 kb on + strand at 334.318 kb on - strand at 334.318 kb on - strand at 334.318 kb on - strand at 334.318 kb on - strand at 334.318 kb on - strand at 334.323 kb on + strand at 334.323 kb on + strand at 334.323 kb on + strand at 334.324 kb on - strand at 334.324 kb on - strand at 334.347 kb on + strand at 334.347 kb on + strand at 334.347 kb on + strand at 334.347 kb on + strand at 334.347 kb on + strand at 334.347 kb on + strand at 334.475 kb on + strand, within GFF2543 at 334.532 kb on + strand, within GFF2543 at 334.533 kb on - strand, within GFF2543 at 334.809 kb on - strand, within GFF2543 at 334.809 kb on - strand, within GFF2543 at 334.886 kb on + strand, within GFF2543 at 334.886 kb on + strand, within GFF2543 at 334.886 kb on + strand, within GFF2543 at 334.887 kb on - strand, within GFF2543 at 334.887 kb on - strand, within GFF2543 at 334.887 kb on - strand, within GFF2543 at 334.958 kb on + strand at 334.959 kb on - strand at 334.959 kb on - strand at 335.008 kb on + strand at 335.008 kb on + strand at 335.009 kb on - strand at 335.014 kb on + strand at 335.015 kb on - strand at 335.034 kb on + strand at 335.067 kb on + strand at 335.081 kb on + strand at 335.242 kb on - strand, within GFF2544 at 335.242 kb on - strand, within GFF2544 at 335.570 kb on - strand, within GFF2544 at 335.645 kb on - strand, within GFF2544 at 335.659 kb on + strand at 335.659 kb on + strand at 335.659 kb on + strand at 335.660 kb on - strand at 335.660 kb on - strand at 335.703 kb on + strand at 335.732 kb on - strand at 335.732 kb on - strand at 335.732 kb on - strand at 335.732 kb on - strand at 335.732 kb on - strand at 335.732 kb on - strand at 335.790 kb on + strand at 335.790 kb on + strand at 335.790 kb on + strand at 335.790 kb on + strand at 335.829 kb on + strand at 335.840 kb on + strand at 335.840 kb on + strand at 335.841 kb on - strand at 335.841 kb on - strand at 335.841 kb on - strand at 335.841 kb on - strand at 335.841 kb on - strand at 335.841 kb on - strand at 335.841 kb on - strand at 335.845 kb on + strand at 335.845 kb on + strand at 335.845 kb on + strand at 335.846 kb on - strand at 335.846 kb on - strand at 335.846 kb on - strand at 335.846 kb on - strand at 335.846 kb on - strand at 335.873 kb on + strand at 335.873 kb on + strand at 335.873 kb on + strand at 335.874 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 333,386 + -1.1 333,386 + -1.1 333,416 + -0.2 334,149 + -0.0 334,150 - +0.1 334,150 - -0.1 334,152 + +1.4 334,153 - +0.1 334,153 - +0.9 334,153 - +0.0 334,224 - -1.2 334,224 - -0.7 334,232 - -0.8 334,232 - -0.2 334,232 - -0.4 334,237 + -0.8 334,262 - -0.7 334,302 + -1.2 334,317 + +0.4 334,317 + -0.6 334,317 + +0.1 334,318 - -0.4 334,318 - +0.9 334,318 - -2.2 334,318 - -0.7 334,318 - +0.2 334,323 + +0.7 334,323 + -0.6 334,323 + -1.4 334,324 - +0.1 334,324 - +0.9 334,347 + +1.5 334,347 + +0.1 334,347 + -0.4 334,347 + -0.8 334,347 + -0.7 334,347 + -0.3 334,475 + GFF2543 0.21 -0.4 334,532 + GFF2543 0.31 +1.1 334,533 - GFF2543 0.31 -0.5 334,809 - GFF2543 0.75 +1.2 334,809 - GFF2543 0.75 -0.6 334,886 + GFF2543 0.88 +0.7 334,886 + GFF2543 0.88 -0.4 334,886 + GFF2543 0.88 +1.0 334,887 - GFF2543 0.88 +0.7 334,887 - GFF2543 0.88 +0.9 334,887 - GFF2543 0.88 +0.6 334,958 + -1.9 334,959 - +1.4 334,959 - -0.5 335,008 + -0.2 335,008 + +0.4 335,009 - +0.1 335,014 + +0.6 335,015 - -0.7 335,034 + -1.2 335,067 + -0.1 335,081 + +0.4 335,242 - GFF2544 0.12 -1.7 335,242 - GFF2544 0.12 +0.9 335,570 - GFF2544 0.73 +0.5 335,645 - GFF2544 0.87 +1.0 335,659 + -0.5 335,659 + +0.5 335,659 + +0.2 335,660 - +1.3 335,660 - -1.4 335,703 + -0.6 335,732 - -0.8 335,732 - +0.3 335,732 - +0.4 335,732 - +1.1 335,732 - +0.3 335,732 - +0.9 335,790 + -1.1 335,790 + -0.5 335,790 + -0.0 335,790 + +1.1 335,829 + +0.3 335,840 + -0.6 335,840 + +0.0 335,841 - +0.1 335,841 - -0.3 335,841 - -0.4 335,841 - -0.9 335,841 - -0.2 335,841 - +0.8 335,841 - -0.4 335,845 + +1.4 335,845 + -0.3 335,845 + -1.4 335,846 - +0.4 335,846 - -0.9 335,846 - -0.8 335,846 - -0.5 335,846 - -0.9 335,873 + +0.3 335,873 + -0.9 335,873 + -0.2 335,874 - -0.2
Or see this region's nucleotide sequence