Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2480 and GFF2481 are separated by 90 nucleotides GFF2481 and GFF2482 are separated by 1 nucleotides GFF2482 and GFF2483 are separated by 263 nucleotides GFF2483 and GFF2484 overlap by 4 nucleotides
GFF2480 - hypothetical protein, at 268,026 to 268,979
GFF2480
GFF2481 - Chemotaxis protein CheW, at 269,070 to 269,555
GFF2481
GFF2482 - hypothetical protein, at 269,557 to 269,952
GFF2482
GFF2483 - Flagellar biosynthetic protein FlhB, at 270,216 to 270,545
GFF2483
GFF2484 - hypothetical protein, at 270,542 to 272,116
GFF2484
Position (kb) 269
270 Strain fitness (log2 ratio) -1
0
1 at 268.585 kb on - strand, within GFF2480 at 268.585 kb on - strand, within GFF2480 at 268.585 kb on - strand, within GFF2480 at 268.740 kb on + strand, within GFF2480 at 268.740 kb on + strand, within GFF2480 at 268.740 kb on + strand, within GFF2480 at 268.740 kb on + strand, within GFF2480 at 268.740 kb on + strand, within GFF2480 at 268.741 kb on - strand, within GFF2480 at 268.741 kb on - strand, within GFF2480 at 268.753 kb on + strand, within GFF2480 at 268.761 kb on + strand, within GFF2480 at 268.900 kb on + strand at 268.901 kb on - strand at 268.963 kb on + strand at 268.963 kb on + strand at 268.964 kb on - strand at 268.967 kb on + strand at 268.967 kb on + strand at 268.968 kb on - strand at 268.968 kb on - strand at 268.977 kb on + strand at 268.977 kb on + strand at 268.977 kb on + strand at 268.977 kb on + strand at 268.977 kb on + strand at 268.978 kb on - strand at 268.978 kb on - strand at 268.978 kb on - strand at 268.978 kb on - strand at 268.978 kb on - strand at 268.978 kb on - strand at 268.978 kb on - strand at 268.989 kb on + strand at 268.989 kb on + strand at 268.989 kb on + strand at 268.989 kb on + strand at 268.989 kb on + strand at 268.989 kb on + strand at 268.990 kb on - strand at 268.990 kb on - strand at 268.990 kb on - strand at 268.990 kb on - strand at 268.990 kb on - strand at 269.070 kb on - strand at 269.075 kb on + strand at 269.075 kb on + strand at 269.075 kb on + strand at 269.076 kb on - strand at 269.076 kb on - strand at 269.226 kb on + strand, within GFF2481 at 269.226 kb on + strand, within GFF2481 at 269.227 kb on - strand, within GFF2481 at 269.227 kb on - strand, within GFF2481 at 269.227 kb on - strand, within GFF2481 at 269.394 kb on + strand, within GFF2481 at 269.395 kb on - strand, within GFF2481 at 269.626 kb on + strand, within GFF2482 at 269.627 kb on - strand, within GFF2482 at 269.627 kb on - strand, within GFF2482 at 269.627 kb on - strand, within GFF2482 at 269.627 kb on - strand, within GFF2482 at 269.627 kb on - strand, within GFF2482 at 269.999 kb on + strand at 269.999 kb on + strand at 269.999 kb on + strand at 270.000 kb on - strand at 270.000 kb on - strand at 270.000 kb on - strand at 270.220 kb on + strand at 270.220 kb on + strand at 270.338 kb on - strand, within GFF2483 at 270.502 kb on + strand, within GFF2483 at 270.502 kb on + strand, within GFF2483 at 270.502 kb on + strand, within GFF2483 at 270.502 kb on + strand, within GFF2483 at 270.502 kb on + strand, within GFF2483 at 270.503 kb on - strand, within GFF2483 at 270.503 kb on - strand, within GFF2483 at 270.503 kb on - strand, within GFF2483 at 270.503 kb on - strand, within GFF2483
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 268,585 - GFF2480 0.59 +0.3 268,585 - GFF2480 0.59 -0.8 268,585 - GFF2480 0.59 +1.0 268,740 + GFF2480 0.75 -0.2 268,740 + GFF2480 0.75 -0.8 268,740 + GFF2480 0.75 -0.4 268,740 + GFF2480 0.75 -0.2 268,740 + GFF2480 0.75 +0.1 268,741 - GFF2480 0.75 -0.8 268,741 - GFF2480 0.75 +0.2 268,753 + GFF2480 0.76 -1.2 268,761 + GFF2480 0.77 +0.1 268,900 + +0.7 268,901 - -1.1 268,963 + +1.1 268,963 + -0.5 268,964 - +0.7 268,967 + -0.8 268,967 + -0.9 268,968 - +0.0 268,968 - -0.4 268,977 + +0.6 268,977 + -0.9 268,977 + +0.4 268,977 + +0.6 268,977 + +0.1 268,978 - -0.9 268,978 - +0.4 268,978 - -0.2 268,978 - +0.6 268,978 - +0.7 268,978 - +0.4 268,978 - +0.3 268,989 + +0.4 268,989 + -0.6 268,989 + -0.1 268,989 + +0.5 268,989 + -0.3 268,989 + -0.0 268,990 - -0.8 268,990 - +0.1 268,990 - +0.6 268,990 - -0.0 268,990 - +0.1 269,070 - +0.0 269,075 + -1.3 269,075 + -0.2 269,075 + +0.3 269,076 - -0.3 269,076 - +0.6 269,226 + GFF2481 0.32 +0.1 269,226 + GFF2481 0.32 -1.1 269,227 - GFF2481 0.32 -0.3 269,227 - GFF2481 0.32 +1.1 269,227 - GFF2481 0.32 -0.3 269,394 + GFF2481 0.67 -0.9 269,395 - GFF2481 0.67 +0.2 269,626 + GFF2482 0.17 +0.8 269,627 - GFF2482 0.18 -0.2 269,627 - GFF2482 0.18 +1.1 269,627 - GFF2482 0.18 +0.7 269,627 - GFF2482 0.18 +0.5 269,627 - GFF2482 0.18 +0.6 269,999 + +0.8 269,999 + -0.9 269,999 + +0.7 270,000 - +0.5 270,000 - +1.0 270,000 - -1.2 270,220 + -0.7 270,220 + +0.7 270,338 - GFF2483 0.37 +1.0 270,502 + GFF2483 0.87 +0.2 270,502 + GFF2483 0.87 -0.7 270,502 + GFF2483 0.87 +0.2 270,502 + GFF2483 0.87 -0.9 270,502 + GFF2483 0.87 +0.5 270,503 - GFF2483 0.87 -0.1 270,503 - GFF2483 0.87 -0.5 270,503 - GFF2483 0.87 +0.1 270,503 - GFF2483 0.87 -0.5
Or see this region's nucleotide sequence