Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2470 and GFF2471 are separated by 116 nucleotides GFF2471 and GFF2472 overlap by 4 nucleotides GFF2472 and GFF2473 are separated by 155 nucleotides GFF2473 and GFF2474 are separated by 18 nucleotides
GFF2470 - Flagellar biosynthesis protein FlhF, at 257,564 to 258,904
GFF2470
GFF2471 - Flagellum site-determining protein YlxH, at 259,021 to 259,851
GFF2471
GFF2472 - RNA polymerase sigma factor FliA, at 259,848 to 260,588
GFF2472
GFF2473 - Chemotaxis protein CheY, at 260,744 to 261,127
GFF2473
GFF2474 - Protein phosphatase CheZ, at 261,146 to 261,934
GFF2474
Position (kb) 259
260
261 Strain fitness (log2 ratio) -2
-1
0
1
2 at 258.871 kb on + strand at 258.871 kb on + strand at 258.871 kb on + strand at 258.872 kb on - strand at 258.872 kb on - strand at 258.872 kb on - strand at 258.872 kb on - strand at 258.872 kb on - strand at 258.872 kb on - strand at 258.875 kb on + strand at 258.875 kb on + strand at 258.875 kb on + strand at 258.875 kb on + strand at 258.875 kb on + strand at 258.875 kb on + strand at 258.875 kb on + strand at 258.875 kb on + strand at 258.875 kb on + strand at 258.875 kb on + strand at 258.876 kb on - strand at 258.876 kb on - strand at 258.876 kb on - strand at 258.876 kb on - strand at 258.876 kb on - strand at 258.876 kb on - strand at 258.907 kb on + strand at 258.907 kb on + strand at 258.907 kb on + strand at 258.908 kb on - strand at 258.908 kb on - strand at 258.926 kb on + strand at 258.926 kb on + strand at 258.930 kb on + strand at 258.930 kb on + strand at 258.930 kb on + strand at 258.930 kb on + strand at 258.931 kb on - strand at 258.931 kb on - strand at 258.931 kb on - strand at 258.931 kb on - strand at 258.931 kb on - strand at 258.979 kb on + strand at 258.979 kb on + strand at 258.979 kb on + strand at 258.980 kb on - strand at 258.995 kb on + strand at 258.995 kb on + strand at 259.009 kb on + strand at 259.010 kb on - strand at 259.017 kb on + strand at 259.017 kb on + strand at 259.018 kb on - strand at 259.041 kb on - strand at 259.086 kb on + strand at 259.087 kb on - strand at 259.087 kb on - strand at 259.087 kb on - strand at 259.419 kb on - strand, within GFF2471 at 259.523 kb on - strand, within GFF2471 at 259.639 kb on + strand, within GFF2471 at 259.640 kb on - strand, within GFF2471 at 259.640 kb on - strand, within GFF2471 at 259.640 kb on - strand, within GFF2471 at 259.640 kb on - strand, within GFF2471 at 259.847 kb on + strand at 259.847 kb on + strand at 259.848 kb on - strand at 259.848 kb on - strand at 259.872 kb on + strand at 259.899 kb on + strand at 259.900 kb on - strand at 259.900 kb on - strand at 259.944 kb on + strand, within GFF2472 at 259.945 kb on - strand, within GFF2472 at 259.945 kb on - strand, within GFF2472 at 259.945 kb on - strand, within GFF2472 at 260.034 kb on + strand, within GFF2472 at 260.034 kb on + strand, within GFF2472 at 260.034 kb on + strand, within GFF2472 at 260.034 kb on + strand, within GFF2472 at 260.068 kb on - strand, within GFF2472 at 260.144 kb on + strand, within GFF2472 at 260.144 kb on + strand, within GFF2472 at 260.144 kb on + strand, within GFF2472 at 260.144 kb on + strand, within GFF2472 at 260.145 kb on - strand, within GFF2472 at 260.148 kb on - strand, within GFF2472 at 260.148 kb on - strand, within GFF2472 at 260.186 kb on + strand, within GFF2472 at 260.186 kb on + strand, within GFF2472 at 260.187 kb on - strand, within GFF2472 at 260.187 kb on - strand, within GFF2472 at 260.187 kb on - strand, within GFF2472 at 260.250 kb on + strand, within GFF2472 at 260.253 kb on + strand, within GFF2472 at 260.254 kb on - strand, within GFF2472 at 260.254 kb on - strand, within GFF2472 at 260.357 kb on + strand, within GFF2472 at 260.357 kb on + strand, within GFF2472 at 260.358 kb on - strand, within GFF2472 at 260.358 kb on - strand, within GFF2472 at 260.358 kb on - strand, within GFF2472 at 260.457 kb on + strand, within GFF2472 at 260.458 kb on - strand, within GFF2472 at 260.460 kb on + strand, within GFF2472 at 260.461 kb on - strand, within GFF2472 at 260.461 kb on - strand, within GFF2472 at 260.461 kb on - strand, within GFF2472 at 260.461 kb on - strand, within GFF2472 at 260.679 kb on + strand at 260.679 kb on + strand at 260.680 kb on - strand at 260.724 kb on - strand at 260.998 kb on + strand, within GFF2473 at 261.056 kb on + strand, within GFF2473 at 261.056 kb on + strand, within GFF2473 at 261.056 kb on + strand, within GFF2473 at 261.057 kb on - strand, within GFF2473 at 261.057 kb on - strand, within GFF2473 at 261.057 kb on - strand, within GFF2473 at 261.145 kb on + strand at 261.146 kb on - strand at 261.146 kb on - strand at 261.146 kb on - strand at 261.146 kb on - strand at 261.155 kb on - strand at 261.416 kb on + strand, within GFF2474 at 261.416 kb on + strand, within GFF2474
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 258,871 + -0.1 258,871 + +1.6 258,871 + +0.3 258,872 - -0.9 258,872 - -1.1 258,872 - -1.3 258,872 - -0.9 258,872 - +0.2 258,872 - -1.7 258,875 + -0.2 258,875 + +0.4 258,875 + +0.2 258,875 + +0.4 258,875 + +0.7 258,875 + -0.4 258,875 + +0.6 258,875 + +1.4 258,875 + -0.0 258,875 + +0.3 258,876 - -1.2 258,876 - -0.4 258,876 - +2.1 258,876 - +1.6 258,876 - -1.3 258,876 - -1.6 258,907 + -0.0 258,907 + +0.3 258,907 + +0.7 258,908 - -2.1 258,908 - -1.2 258,926 + +1.0 258,926 + -0.5 258,930 + +0.3 258,930 + +0.6 258,930 + +0.5 258,930 + +1.1 258,931 - +0.1 258,931 - -0.4 258,931 - +0.7 258,931 - +0.1 258,931 - -1.1 258,979 + -0.0 258,979 + -0.0 258,979 + -1.2 258,980 - +0.9 258,995 + -0.5 258,995 + +0.6 259,009 + -0.6 259,010 - -0.4 259,017 + -1.4 259,017 + -1.2 259,018 - -0.5 259,041 - -0.6 259,086 + -0.6 259,087 - -1.3 259,087 - -0.1 259,087 - +1.4 259,419 - GFF2471 0.48 -0.6 259,523 - GFF2471 0.60 -1.7 259,639 + GFF2471 0.74 -1.2 259,640 - GFF2471 0.74 +0.2 259,640 - GFF2471 0.74 +0.1 259,640 - GFF2471 0.74 +0.1 259,640 - GFF2471 0.74 -1.8 259,847 + +0.3 259,847 + +0.1 259,848 - +0.1 259,848 - -0.9 259,872 + +0.2 259,899 + +0.4 259,900 - +0.8 259,900 - +2.4 259,944 + GFF2472 0.13 +0.3 259,945 - GFF2472 0.13 +0.8 259,945 - GFF2472 0.13 -0.6 259,945 - GFF2472 0.13 +1.1 260,034 + GFF2472 0.25 +1.0 260,034 + GFF2472 0.25 +0.5 260,034 + GFF2472 0.25 +1.0 260,034 + GFF2472 0.25 +0.7 260,068 - GFF2472 0.30 +1.2 260,144 + GFF2472 0.40 +1.3 260,144 + GFF2472 0.40 +1.4 260,144 + GFF2472 0.40 +0.8 260,144 + GFF2472 0.40 +0.2 260,145 - GFF2472 0.40 +0.1 260,148 - GFF2472 0.40 +1.3 260,148 - GFF2472 0.40 +1.7 260,186 + GFF2472 0.46 +0.1 260,186 + GFF2472 0.46 +0.9 260,187 - GFF2472 0.46 -0.6 260,187 - GFF2472 0.46 +0.7 260,187 - GFF2472 0.46 +1.5 260,250 + GFF2472 0.54 +1.4 260,253 + GFF2472 0.55 +0.7 260,254 - GFF2472 0.55 +0.3 260,254 - GFF2472 0.55 +0.8 260,357 + GFF2472 0.69 +0.5 260,357 + GFF2472 0.69 +0.4 260,358 - GFF2472 0.69 +2.2 260,358 - GFF2472 0.69 +1.1 260,358 - GFF2472 0.69 +0.8 260,457 + GFF2472 0.82 +0.4 260,458 - GFF2472 0.82 -0.6 260,460 + GFF2472 0.83 +0.1 260,461 - GFF2472 0.83 +0.7 260,461 - GFF2472 0.83 +0.5 260,461 - GFF2472 0.83 +0.8 260,461 - GFF2472 0.83 +0.4 260,679 + -0.0 260,679 + -0.2 260,680 - +0.4 260,724 - +0.4 260,998 + GFF2473 0.66 +1.6 261,056 + GFF2473 0.81 -0.8 261,056 + GFF2473 0.81 -0.2 261,056 + GFF2473 0.81 +1.2 261,057 - GFF2473 0.82 +0.5 261,057 - GFF2473 0.82 +0.3 261,057 - GFF2473 0.82 -0.8 261,145 + -0.7 261,146 - -0.8 261,146 - +0.8 261,146 - -0.9 261,146 - -1.7 261,155 - +0.4 261,416 + GFF2474 0.34 +0.3 261,416 + GFF2474 0.34 +1.6
Or see this region's nucleotide sequence