Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2419 and GFF2420 are separated by 11 nucleotides GFF2420 and GFF2421 are separated by 25 nucleotides
GFF2419 - Flagellar P-ring protein, at 201,524 to 202,630
GFF2419
GFF2420 - hypothetical protein, at 202,642 to 203,958
GFF2420
GFF2421 - hypothetical protein, at 203,984 to 206,029
GFF2421
Position (kb) 202
203
204 Strain fitness (log2 ratio) -2
-1
0
1 at 201.665 kb on - strand, within GFF2419 at 201.865 kb on + strand, within GFF2419 at 201.865 kb on + strand, within GFF2419 at 201.932 kb on + strand, within GFF2419 at 202.238 kb on + strand, within GFF2419 at 202.238 kb on + strand, within GFF2419 at 202.446 kb on + strand, within GFF2419 at 202.647 kb on + strand at 202.871 kb on - strand, within GFF2420 at 202.883 kb on - strand, within GFF2420 at 202.883 kb on - strand, within GFF2420 at 203.154 kb on + strand, within GFF2420 at 203.347 kb on + strand, within GFF2420 at 203.348 kb on - strand, within GFF2420 at 203.348 kb on - strand, within GFF2420 at 203.410 kb on + strand, within GFF2420 at 203.728 kb on + strand, within GFF2420 at 203.728 kb on + strand, within GFF2420 at 203.728 kb on + strand, within GFF2420 at 203.729 kb on - strand, within GFF2420 at 203.729 kb on - strand, within GFF2420 at 203.738 kb on - strand, within GFF2420 at 203.738 kb on - strand, within GFF2420 at 203.738 kb on - strand, within GFF2420 at 203.832 kb on - strand at 203.923 kb on + strand at 203.924 kb on - strand at 203.954 kb on + strand at 203.954 kb on + strand at 203.956 kb on + strand at 203.956 kb on + strand at 203.956 kb on + strand at 203.957 kb on - strand at 203.968 kb on + strand at 203.968 kb on + strand at 203.969 kb on - strand at 203.971 kb on + strand at 203.971 kb on + strand at 203.971 kb on + strand at 203.972 kb on - strand at 203.972 kb on - strand at 203.972 kb on - strand at 204.188 kb on + strand at 204.653 kb on + strand, within GFF2421 at 204.653 kb on + strand, within GFF2421 at 204.654 kb on - strand, within GFF2421 at 204.778 kb on + strand, within GFF2421 at 204.778 kb on + strand, within GFF2421 at 204.778 kb on + strand, within GFF2421 at 204.778 kb on + strand, within GFF2421
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 201,665 - GFF2419 0.13 +0.9 201,865 + GFF2419 0.31 +1.6 201,865 + GFF2419 0.31 +1.0 201,932 + GFF2419 0.37 +1.7 202,238 + GFF2419 0.64 +0.5 202,238 + GFF2419 0.64 +0.6 202,446 + GFF2419 0.83 -1.0 202,647 + +0.3 202,871 - GFF2420 0.17 +1.1 202,883 - GFF2420 0.18 +0.6 202,883 - GFF2420 0.18 +0.5 203,154 + GFF2420 0.39 +1.6 203,347 + GFF2420 0.54 +0.4 203,348 - GFF2420 0.54 +1.5 203,348 - GFF2420 0.54 +1.2 203,410 + GFF2420 0.58 -2.1 203,728 + GFF2420 0.82 -0.1 203,728 + GFF2420 0.82 +1.2 203,728 + GFF2420 0.82 +0.3 203,729 - GFF2420 0.83 +0.5 203,729 - GFF2420 0.83 +0.3 203,738 - GFF2420 0.83 +0.7 203,738 - GFF2420 0.83 -0.3 203,738 - GFF2420 0.83 +0.5 203,832 - +0.4 203,923 + +0.8 203,924 - +0.9 203,954 + +0.1 203,954 + -0.1 203,956 + -0.4 203,956 + -0.6 203,956 + +0.3 203,957 - +0.4 203,968 + -0.7 203,968 + -0.2 203,969 - +1.6 203,971 + -0.9 203,971 + -1.5 203,971 + +0.1 203,972 - +1.0 203,972 - +0.7 203,972 - +0.1 204,188 + +0.1 204,653 + GFF2421 0.33 +0.6 204,653 + GFF2421 0.33 +0.8 204,654 - GFF2421 0.33 +0.3 204,778 + GFF2421 0.39 +0.0 204,778 + GFF2421 0.39 +1.0 204,778 + GFF2421 0.39 +0.5 204,778 + GFF2421 0.39 +0.6
Or see this region's nucleotide sequence