Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2415 and GFF2416 are separated by 345 nucleotides GFF2416 and GFF2417 are separated by 45 nucleotides GFF2417 and GFF2418 are separated by 51 nucleotides
GFF2415 - Transcriptional regulatory protein TyrR, at 197,288 to 198,850
GFF2415
GFF2416 - Flagellar basal-body rod protein FlgF, at 199,196 to 199,936
GFF2416
GFF2417 - Flagellar basal-body rod protein FlgG, at 199,982 to 200,767
GFF2417
GFF2418 - Flagellar L-ring protein, at 200,819 to 201,514
GFF2418
Position (kb) 199
200 Strain fitness (log2 ratio) -1
0
1
2 at 198.302 kb on + strand, within GFF2415 at 198.302 kb on + strand, within GFF2415 at 198.302 kb on + strand, within GFF2415 at 198.302 kb on + strand, within GFF2415 at 198.303 kb on - strand, within GFF2415 at 198.303 kb on - strand, within GFF2415 at 198.303 kb on - strand, within GFF2415 at 198.303 kb on - strand, within GFF2415 at 198.303 kb on - strand, within GFF2415 at 198.303 kb on - strand, within GFF2415 at 198.303 kb on - strand, within GFF2415 at 198.303 kb on - strand, within GFF2415 at 198.303 kb on - strand, within GFF2415 at 198.383 kb on + strand, within GFF2415 at 198.383 kb on + strand, within GFF2415 at 198.384 kb on - strand, within GFF2415 at 198.543 kb on - strand, within GFF2415 at 198.544 kb on - strand, within GFF2415 at 198.579 kb on + strand, within GFF2415 at 198.580 kb on - strand, within GFF2415 at 198.580 kb on - strand, within GFF2415 at 198.632 kb on - strand, within GFF2415 at 198.632 kb on - strand, within GFF2415 at 198.632 kb on - strand, within GFF2415 at 198.740 kb on + strand at 198.740 kb on + strand at 198.740 kb on + strand at 198.740 kb on + strand at 198.740 kb on + strand at 198.741 kb on - strand at 198.821 kb on + strand at 198.822 kb on - strand at 198.822 kb on - strand at 198.822 kb on - strand at 198.822 kb on - strand at 198.852 kb on + strand at 198.853 kb on - strand at 198.853 kb on - strand at 198.876 kb on + strand at 198.876 kb on + strand at 198.965 kb on + strand at 198.966 kb on - strand at 199.153 kb on + strand at 199.154 kb on - strand at 199.205 kb on + strand at 199.205 kb on + strand at 199.205 kb on + strand at 199.205 kb on + strand at 199.205 kb on + strand at 199.205 kb on + strand at 199.205 kb on + strand at 199.205 kb on + strand at 199.205 kb on + strand at 199.205 kb on + strand at 199.206 kb on - strand at 199.206 kb on - strand at 199.206 kb on - strand at 199.206 kb on - strand at 199.206 kb on - strand at 199.206 kb on - strand at 199.206 kb on - strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.211 kb on + strand at 199.212 kb on - strand at 199.212 kb on - strand at 199.212 kb on - strand at 199.212 kb on - strand at 199.212 kb on - strand at 199.212 kb on - strand at 199.212 kb on - strand at 199.490 kb on + strand, within GFF2416 at 199.490 kb on + strand, within GFF2416 at 199.490 kb on + strand, within GFF2416 at 199.736 kb on + strand, within GFF2416 at 199.736 kb on + strand, within GFF2416 at 199.736 kb on + strand, within GFF2416 at 199.737 kb on - strand, within GFF2416 at 199.934 kb on + strand at 199.934 kb on + strand at 199.935 kb on - strand at 199.935 kb on - strand at 199.935 kb on - strand at 199.935 kb on - strand at 199.938 kb on + strand at 199.938 kb on + strand at 199.939 kb on - strand at 199.956 kb on + strand at 199.995 kb on + strand at 199.996 kb on - strand at 200.322 kb on - strand, within GFF2417 at 200.322 kb on - strand, within GFF2417 at 200.765 kb on + strand at 200.765 kb on + strand at 200.813 kb on - strand at 200.832 kb on + strand at 200.832 kb on + strand at 200.832 kb on + strand at 200.833 kb on - strand at 200.833 kb on - strand at 200.833 kb on - strand at 200.833 kb on - strand at 200.906 kb on + strand, within GFF2418 at 200.907 kb on - strand, within GFF2418 at 200.907 kb on - strand, within GFF2418 at 200.907 kb on - strand, within GFF2418 at 200.909 kb on + strand, within GFF2418 at 200.910 kb on - strand, within GFF2418 at 200.910 kb on - strand, within GFF2418 at 200.910 kb on - strand, within GFF2418
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 198,302 + GFF2415 0.65 +0.5 198,302 + GFF2415 0.65 +0.1 198,302 + GFF2415 0.65 -0.2 198,302 + GFF2415 0.65 +0.3 198,303 - GFF2415 0.65 -0.2 198,303 - GFF2415 0.65 -0.7 198,303 - GFF2415 0.65 +0.2 198,303 - GFF2415 0.65 -0.1 198,303 - GFF2415 0.65 +0.9 198,303 - GFF2415 0.65 -1.4 198,303 - GFF2415 0.65 +0.2 198,303 - GFF2415 0.65 +0.1 198,303 - GFF2415 0.65 -0.6 198,383 + GFF2415 0.70 -0.3 198,383 + GFF2415 0.70 -0.3 198,384 - GFF2415 0.70 -0.5 198,543 - GFF2415 0.80 +0.1 198,544 - GFF2415 0.80 +0.7 198,579 + GFF2415 0.83 +0.5 198,580 - GFF2415 0.83 +0.6 198,580 - GFF2415 0.83 +0.4 198,632 - GFF2415 0.86 -1.6 198,632 - GFF2415 0.86 +0.1 198,632 - GFF2415 0.86 -1.5 198,740 + -1.1 198,740 + -0.2 198,740 + +1.0 198,740 + -0.3 198,740 + -1.6 198,741 - +0.2 198,821 + +1.3 198,822 - +0.9 198,822 - +0.6 198,822 - +0.4 198,822 - -0.6 198,852 + +0.4 198,853 - -0.6 198,853 - -0.3 198,876 + +0.5 198,876 + -1.2 198,965 + -1.5 198,966 - -0.8 199,153 + -0.8 199,154 - +1.0 199,205 + +1.0 199,205 + +1.6 199,205 + +0.9 199,205 + +0.8 199,205 + -0.1 199,205 + +1.1 199,205 + +0.0 199,205 + +0.6 199,205 + +0.6 199,205 + +1.1 199,206 - +0.3 199,206 - +0.5 199,206 - +0.4 199,206 - +0.7 199,206 - +0.8 199,206 - +1.8 199,206 - +0.0 199,211 + +0.4 199,211 + +0.4 199,211 + +0.4 199,211 + +0.4 199,211 + +0.8 199,211 + +0.2 199,211 + +0.4 199,211 + +0.9 199,211 + +1.0 199,211 + +0.4 199,211 + +0.0 199,211 + -0.0 199,211 + +1.4 199,211 + -0.7 199,212 - +0.4 199,212 - +1.0 199,212 - +0.5 199,212 - +1.9 199,212 - -0.0 199,212 - +0.7 199,212 - +0.4 199,490 + GFF2416 0.40 +0.8 199,490 + GFF2416 0.40 +0.5 199,490 + GFF2416 0.40 +1.4 199,736 + GFF2416 0.73 +0.8 199,736 + GFF2416 0.73 +0.5 199,736 + GFF2416 0.73 +1.5 199,737 - GFF2416 0.73 +0.1 199,934 + -1.0 199,934 + +0.1 199,935 - +1.6 199,935 - +0.2 199,935 - +0.5 199,935 - +0.9 199,938 + -0.3 199,938 + +1.4 199,939 - +0.4 199,956 + -0.2 199,995 + +0.8 199,996 - +0.4 200,322 - GFF2417 0.43 -0.1 200,322 - GFF2417 0.43 -0.2 200,765 + -0.4 200,765 + -1.2 200,813 - +0.1 200,832 + +0.5 200,832 + +0.9 200,832 + +0.9 200,833 - +1.2 200,833 - +1.8 200,833 - +0.2 200,833 - +0.6 200,906 + GFF2418 0.12 +0.4 200,907 - GFF2418 0.13 +0.7 200,907 - GFF2418 0.13 +0.9 200,907 - GFF2418 0.13 +1.7 200,909 + GFF2418 0.13 +1.3 200,910 - GFF2418 0.13 +1.4 200,910 - GFF2418 0.13 +0.3 200,910 - GFF2418 0.13 +1.0
Or see this region's nucleotide sequence