Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2150 and GFF2151 are separated by 201 nucleotides GFF2151 and GFF2152 are separated by 201 nucleotides GFF2152 and GFF2153 are separated by 5 nucleotides
GFF2150 - Acyl-homoserine lactone acylase QuiP, at 399,137 to 401,587
GFF2150
GFF2151 - Isochorismatase family protein YecD, at 401,789 to 402,346
GFF2151
GFF2152 - hypothetical protein, at 402,548 to 402,751
GFF2152
GFF2153 - hypothetical protein, at 402,757 to 403,242
GFF2153
Position (kb) 401
402
403 Strain fitness (log2 ratio) -2
-1
0
1 at 401.091 kb on + strand, within GFF2150 at 401.131 kb on - strand, within GFF2150 at 401.142 kb on + strand, within GFF2150 at 401.143 kb on - strand, within GFF2150 at 401.143 kb on - strand, within GFF2150 at 401.143 kb on - strand, within GFF2150 at 401.163 kb on + strand, within GFF2150 at 401.163 kb on + strand, within GFF2150 at 401.163 kb on + strand, within GFF2150 at 401.163 kb on + strand, within GFF2150 at 401.163 kb on + strand, within GFF2150 at 401.163 kb on + strand, within GFF2150 at 401.163 kb on + strand, within GFF2150 at 401.163 kb on + strand, within GFF2150 at 401.163 kb on + strand, within GFF2150 at 401.163 kb on + strand, within GFF2150 at 401.164 kb on - strand, within GFF2150 at 401.164 kb on - strand, within GFF2150 at 401.164 kb on - strand, within GFF2150 at 401.164 kb on - strand, within GFF2150 at 401.164 kb on - strand, within GFF2150 at 401.164 kb on - strand, within GFF2150 at 401.164 kb on - strand, within GFF2150 at 401.164 kb on - strand, within GFF2150 at 401.164 kb on - strand, within GFF2150 at 401.205 kb on + strand, within GFF2150 at 401.205 kb on + strand, within GFF2150 at 401.205 kb on + strand, within GFF2150 at 401.205 kb on + strand, within GFF2150 at 401.205 kb on + strand, within GFF2150 at 401.205 kb on + strand, within GFF2150 at 401.205 kb on + strand, within GFF2150 at 401.206 kb on - strand, within GFF2150 at 401.206 kb on - strand, within GFF2150 at 401.206 kb on - strand, within GFF2150 at 401.206 kb on - strand, within GFF2150 at 401.206 kb on - strand, within GFF2150 at 401.206 kb on - strand, within GFF2150 at 401.247 kb on + strand, within GFF2150 at 401.247 kb on + strand, within GFF2150 at 401.247 kb on + strand, within GFF2150 at 401.248 kb on - strand, within GFF2150 at 401.333 kb on - strand, within GFF2150 at 401.352 kb on + strand at 401.569 kb on + strand at 401.570 kb on - strand at 401.570 kb on - strand at 401.570 kb on - strand at 401.570 kb on - strand at 401.570 kb on - strand at 401.570 kb on - strand at 401.607 kb on + strand at 401.607 kb on + strand at 401.607 kb on + strand at 401.608 kb on - strand at 401.608 kb on - strand at 401.608 kb on - strand at 401.608 kb on - strand at 401.609 kb on + strand at 401.609 kb on + strand at 401.609 kb on + strand at 401.610 kb on - strand at 401.610 kb on - strand at 401.610 kb on - strand at 401.626 kb on + strand at 401.640 kb on + strand at 401.679 kb on + strand at 401.680 kb on - strand at 401.683 kb on + strand at 401.683 kb on + strand at 401.683 kb on + strand at 401.749 kb on + strand at 401.749 kb on + strand at 401.788 kb on + strand at 401.869 kb on + strand, within GFF2151 at 401.869 kb on + strand, within GFF2151 at 401.901 kb on + strand, within GFF2151 at 401.901 kb on + strand, within GFF2151 at 401.901 kb on + strand, within GFF2151 at 401.902 kb on - strand, within GFF2151 at 402.017 kb on - strand, within GFF2151 at 402.202 kb on - strand, within GFF2151 at 402.217 kb on + strand, within GFF2151 at 402.217 kb on + strand, within GFF2151 at 402.218 kb on - strand, within GFF2151 at 402.218 kb on - strand, within GFF2151 at 402.302 kb on + strand at 402.302 kb on + strand at 402.302 kb on + strand at 402.303 kb on - strand at 402.347 kb on + strand at 402.347 kb on + strand at 402.347 kb on + strand at 402.347 kb on + strand at 402.348 kb on - strand at 402.348 kb on - strand at 402.348 kb on - strand at 402.769 kb on + strand at 402.769 kb on + strand at 402.770 kb on - strand at 402.785 kb on - strand at 402.812 kb on + strand, within GFF2153 at 402.812 kb on + strand, within GFF2153 at 402.812 kb on + strand, within GFF2153 at 402.812 kb on + strand, within GFF2153 at 402.813 kb on - strand, within GFF2153 at 402.827 kb on - strand, within GFF2153 at 402.945 kb on - strand, within GFF2153 at 402.970 kb on - strand, within GFF2153 at 403.193 kb on - strand, within GFF2153 at 403.219 kb on + strand at 403.220 kb on - strand at 403.220 kb on - strand at 403.220 kb on - strand at 403.220 kb on - strand at 403.270 kb on - strand at 403.270 kb on - strand at 403.276 kb on + strand at 403.277 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 401,091 + GFF2150 0.80 -0.1 401,131 - GFF2150 0.81 -0.7 401,142 + GFF2150 0.82 -0.2 401,143 - GFF2150 0.82 +0.4 401,143 - GFF2150 0.82 -0.1 401,143 - GFF2150 0.82 +0.3 401,163 + GFF2150 0.83 +0.2 401,163 + GFF2150 0.83 +0.5 401,163 + GFF2150 0.83 +0.4 401,163 + GFF2150 0.83 -0.0 401,163 + GFF2150 0.83 -0.5 401,163 + GFF2150 0.83 -0.8 401,163 + GFF2150 0.83 -0.4 401,163 + GFF2150 0.83 -0.4 401,163 + GFF2150 0.83 +0.4 401,163 + GFF2150 0.83 +0.4 401,164 - GFF2150 0.83 -1.7 401,164 - GFF2150 0.83 -0.2 401,164 - GFF2150 0.83 -0.3 401,164 - GFF2150 0.83 -0.9 401,164 - GFF2150 0.83 +0.4 401,164 - GFF2150 0.83 +0.2 401,164 - GFF2150 0.83 -0.5 401,164 - GFF2150 0.83 -0.0 401,164 - GFF2150 0.83 -1.4 401,205 + GFF2150 0.84 +0.3 401,205 + GFF2150 0.84 +0.5 401,205 + GFF2150 0.84 +0.4 401,205 + GFF2150 0.84 +0.2 401,205 + GFF2150 0.84 +0.6 401,205 + GFF2150 0.84 +0.7 401,205 + GFF2150 0.84 -0.1 401,206 - GFF2150 0.84 +0.5 401,206 - GFF2150 0.84 -0.0 401,206 - GFF2150 0.84 -1.0 401,206 - GFF2150 0.84 +1.2 401,206 - GFF2150 0.84 +0.3 401,206 - GFF2150 0.84 -0.7 401,247 + GFF2150 0.86 -2.2 401,247 + GFF2150 0.86 -0.8 401,247 + GFF2150 0.86 +0.4 401,248 - GFF2150 0.86 +0.0 401,333 - GFF2150 0.90 +0.1 401,352 + -0.6 401,569 + +0.2 401,570 - -0.1 401,570 - -0.4 401,570 - -1.0 401,570 - +0.4 401,570 - +0.4 401,570 - -0.4 401,607 + -0.2 401,607 + +0.8 401,607 + -0.6 401,608 - +1.3 401,608 - -0.9 401,608 - -0.4 401,608 - +0.3 401,609 + +0.6 401,609 + -0.2 401,609 + -0.9 401,610 - -0.0 401,610 - -0.5 401,610 - +1.1 401,626 + +0.3 401,640 + -0.2 401,679 + -1.1 401,680 - +0.4 401,683 + -0.1 401,683 + -1.1 401,683 + +0.5 401,749 + -0.1 401,749 + -1.7 401,788 + -0.6 401,869 + GFF2151 0.14 -0.8 401,869 + GFF2151 0.14 -0.3 401,901 + GFF2151 0.20 -0.9 401,901 + GFF2151 0.20 -0.7 401,901 + GFF2151 0.20 -0.1 401,902 - GFF2151 0.20 -0.5 402,017 - GFF2151 0.41 +0.1 402,202 - GFF2151 0.74 -1.4 402,217 + GFF2151 0.77 -1.3 402,217 + GFF2151 0.77 -0.9 402,218 - GFF2151 0.77 -1.9 402,218 - GFF2151 0.77 -0.0 402,302 + +0.7 402,302 + +0.8 402,302 + +1.6 402,303 - -0.1 402,347 + -0.0 402,347 + -0.6 402,347 + +0.2 402,347 + -0.4 402,348 - -0.7 402,348 - -0.0 402,348 - -0.2 402,769 + -0.8 402,769 + +0.5 402,770 - -1.4 402,785 - +0.7 402,812 + GFF2153 0.11 +0.8 402,812 + GFF2153 0.11 -0.7 402,812 + GFF2153 0.11 -1.7 402,812 + GFF2153 0.11 -0.7 402,813 - GFF2153 0.12 -0.4 402,827 - GFF2153 0.14 +0.2 402,945 - GFF2153 0.39 -0.2 402,970 - GFF2153 0.44 -0.0 403,193 - GFF2153 0.90 -0.6 403,219 + -0.6 403,220 - -0.4 403,220 - +0.6 403,220 - +0.1 403,220 - +0.3 403,270 - +0.4 403,270 - -0.1 403,276 + +0.7 403,277 - +0.3
Or see this region's nucleotide sequence