Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2142 and GFF2143 are separated by 193 nucleotides GFF2143 and GFF2144 are separated by 12 nucleotides
GFF2142 - hypothetical protein, at 388,862 to 391,351
GFF2142
GFF2143 - Histidine transport ATP-binding protein HisP, at 391,545 to 392,309
GFF2143
GFF2144 - hypothetical protein, at 392,322 to 393,440
GFF2144
Position (kb) 391
392
393 Strain fitness (log2 ratio) -2
-1
0
1
2 at 390.949 kb on + strand, within GFF2142 at 390.950 kb on - strand, within GFF2142 at 391.154 kb on - strand at 391.202 kb on + strand at 391.203 kb on - strand at 391.209 kb on + strand at 391.209 kb on + strand at 391.412 kb on - strand at 391.412 kb on - strand at 391.479 kb on + strand at 391.480 kb on - strand at 391.495 kb on + strand at 391.496 kb on - strand at 391.546 kb on + strand at 391.546 kb on + strand at 391.546 kb on + strand at 391.546 kb on + strand at 391.546 kb on + strand at 391.547 kb on - strand at 391.550 kb on + strand at 391.550 kb on + strand at 391.550 kb on + strand at 391.551 kb on - strand at 391.770 kb on + strand, within GFF2143 at 391.771 kb on - strand, within GFF2143 at 391.836 kb on + strand, within GFF2143 at 392.272 kb on + strand at 392.272 kb on + strand at 392.273 kb on - strand at 392.273 kb on - strand at 392.305 kb on + strand at 392.305 kb on + strand at 392.305 kb on + strand at 392.305 kb on + strand at 392.334 kb on + strand at 392.335 kb on - strand at 392.335 kb on - strand at 392.335 kb on - strand at 392.335 kb on - strand at 392.335 kb on - strand at 392.335 kb on - strand at 392.338 kb on + strand at 392.350 kb on + strand at 392.419 kb on + strand at 392.419 kb on + strand at 392.509 kb on + strand, within GFF2144 at 392.509 kb on + strand, within GFF2144 at 392.510 kb on - strand, within GFF2144 at 392.651 kb on - strand, within GFF2144 at 392.651 kb on - strand, within GFF2144 at 392.748 kb on - strand, within GFF2144 at 392.861 kb on - strand, within GFF2144 at 392.905 kb on + strand, within GFF2144 at 392.905 kb on + strand, within GFF2144 at 392.905 kb on + strand, within GFF2144 at 392.906 kb on - strand, within GFF2144
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 390,949 + GFF2142 0.84 -2.7 390,950 - GFF2142 0.84 +1.6 391,154 - -0.3 391,202 + +0.8 391,203 - -0.2 391,209 + +1.7 391,209 + -0.3 391,412 - +0.7 391,412 - -0.6 391,479 + +0.4 391,480 - -0.6 391,495 + +0.0 391,496 - -0.2 391,546 + -0.3 391,546 + -0.2 391,546 + -0.9 391,546 + +0.4 391,546 + +2.0 391,547 - +0.2 391,550 + -0.9 391,550 + -0.6 391,550 + -0.6 391,551 - +0.0 391,770 + GFF2143 0.29 -0.7 391,771 - GFF2143 0.30 -1.4 391,836 + GFF2143 0.38 -0.6 392,272 + -0.6 392,272 + -1.2 392,273 - -1.1 392,273 - -0.0 392,305 + +0.3 392,305 + -0.1 392,305 + -0.4 392,305 + -0.6 392,334 + +0.9 392,335 - +1.2 392,335 - -0.6 392,335 - +0.6 392,335 - -0.4 392,335 - +0.4 392,335 - +0.3 392,338 + -0.2 392,350 + +0.4 392,419 + -0.7 392,419 + +0.3 392,509 + GFF2144 0.17 -0.5 392,509 + GFF2144 0.17 -2.0 392,510 - GFF2144 0.17 +0.4 392,651 - GFF2144 0.29 +0.3 392,651 - GFF2144 0.29 +0.1 392,748 - GFF2144 0.38 -0.9 392,861 - GFF2144 0.48 -0.6 392,905 + GFF2144 0.52 -1.6 392,905 + GFF2144 0.52 -0.2 392,905 + GFF2144 0.52 -0.4 392,906 - GFF2144 0.52 -1.5
Or see this region's nucleotide sequence