Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF208 and GFF209 are separated by 56 nucleotides GFF209 and GFF210 are separated by 23 nucleotides GFF210 and GFF211 are separated by 11 nucleotides
GFF208 - Twitching mobility protein, at 238,209 to 239,243
GFF208
GFF209 - Pyridoxal phosphate homeostasis protein, at 239,300 to 239,986
GFF209
GFF210 - Pyrroline-5-carboxylate reductase, at 240,010 to 240,828
GFF210
GFF211 - hypothetical protein, at 240,840 to 241,430
GFF211
Position (kb) 239
240 Strain fitness (log2 ratio) -1
0
1 at 238.339 kb on + strand, within GFF208 at 238.339 kb on + strand, within GFF208 at 238.339 kb on + strand, within GFF208 at 238.339 kb on + strand, within GFF208 at 238.339 kb on + strand, within GFF208 at 238.340 kb on - strand, within GFF208 at 238.340 kb on - strand, within GFF208 at 238.340 kb on - strand, within GFF208 at 238.340 kb on - strand, within GFF208 at 238.368 kb on + strand, within GFF208 at 238.573 kb on - strand, within GFF208 at 238.573 kb on - strand, within GFF208 at 238.807 kb on + strand, within GFF208 at 238.808 kb on - strand, within GFF208 at 238.808 kb on - strand, within GFF208 at 238.808 kb on - strand, within GFF208 at 239.020 kb on - strand, within GFF208 at 239.020 kb on - strand, within GFF208 at 239.089 kb on + strand, within GFF208 at 239.089 kb on + strand, within GFF208 at 239.089 kb on + strand, within GFF208 at 239.090 kb on - strand, within GFF208 at 239.090 kb on - strand, within GFF208 at 239.090 kb on - strand, within GFF208 at 239.090 kb on - strand, within GFF208 at 239.237 kb on + strand at 239.262 kb on + strand at 239.263 kb on - strand at 239.278 kb on + strand at 239.278 kb on + strand at 239.279 kb on - strand at 239.310 kb on + strand at 239.311 kb on - strand at 239.332 kb on + strand at 239.332 kb on + strand at 239.333 kb on - strand at 239.439 kb on - strand, within GFF209 at 239.439 kb on - strand, within GFF209 at 239.471 kb on + strand, within GFF209 at 239.472 kb on - strand, within GFF209 at 239.972 kb on + strand at 239.972 kb on + strand at 239.973 kb on - strand at 240.024 kb on + strand at 240.826 kb on + strand at 240.826 kb on + strand at 240.827 kb on - strand at 240.827 kb on - strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.837 kb on + strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.838 kb on - strand at 240.868 kb on - strand at 240.894 kb on + strand at 240.948 kb on + strand, within GFF211
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 238,339 + GFF208 0.13 -0.1 238,339 + GFF208 0.13 +0.2 238,339 + GFF208 0.13 -0.6 238,339 + GFF208 0.13 -0.2 238,339 + GFF208 0.13 -0.3 238,340 - GFF208 0.13 +1.7 238,340 - GFF208 0.13 -0.8 238,340 - GFF208 0.13 +0.3 238,340 - GFF208 0.13 -0.3 238,368 + GFF208 0.15 -0.3 238,573 - GFF208 0.35 -1.0 238,573 - GFF208 0.35 -0.3 238,807 + GFF208 0.58 +0.8 238,808 - GFF208 0.58 +0.9 238,808 - GFF208 0.58 +0.1 238,808 - GFF208 0.58 +0.2 239,020 - GFF208 0.78 +0.9 239,020 - GFF208 0.78 -0.2 239,089 + GFF208 0.85 +0.3 239,089 + GFF208 0.85 -1.1 239,089 + GFF208 0.85 -0.7 239,090 - GFF208 0.85 -0.3 239,090 - GFF208 0.85 -0.1 239,090 - GFF208 0.85 -0.1 239,090 - GFF208 0.85 -0.1 239,237 + +0.7 239,262 + +0.1 239,263 - +0.3 239,278 + +0.2 239,278 + +0.5 239,279 - -0.3 239,310 + -0.5 239,311 - -1.1 239,332 + -1.3 239,332 + +0.0 239,333 - -0.8 239,439 - GFF209 0.20 +0.6 239,439 - GFF209 0.20 +0.6 239,471 + GFF209 0.25 +0.4 239,472 - GFF209 0.25 +1.0 239,972 + +0.9 239,972 + -0.5 239,973 - -1.0 240,024 + +0.8 240,826 + -1.1 240,826 + -0.5 240,827 - -1.3 240,827 - +0.8 240,837 + +0.1 240,837 + +0.6 240,837 + -1.0 240,837 + -1.4 240,837 + -0.1 240,837 + +0.6 240,837 + -0.2 240,837 + -1.1 240,837 + +0.0 240,837 + -0.7 240,837 + -0.6 240,837 + +0.3 240,838 - +1.3 240,838 - -0.5 240,838 - -0.5 240,838 - +0.7 240,838 - +1.5 240,838 - -1.0 240,838 - +0.0 240,838 - -1.4 240,838 - -0.4 240,838 - -1.1 240,838 - -1.1 240,838 - -0.4 240,838 - +0.5 240,838 - -0.7 240,868 - +1.6 240,894 + +0.4 240,948 + GFF211 0.18 -0.3
Or see this region's nucleotide sequence