Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1791 and GFF1792 are separated by 197 nucleotides
GFF1791 - hypothetical protein, at 436 to 798
GFF1791
GFF1792 - hypothetical protein, at 996 to 1,712
GFF1792
Position (kb) 0
1 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 0.070 kb on + strand at 0.074 kb on + strand at 0.074 kb on + strand at 0.074 kb on + strand at 0.074 kb on + strand at 0.088 kb on + strand at 0.116 kb on + strand at 0.117 kb on - strand at 0.185 kb on + strand at 0.240 kb on + strand at 0.240 kb on + strand at 0.240 kb on + strand at 0.240 kb on + strand at 0.240 kb on + strand at 0.241 kb on - strand at 0.241 kb on - strand at 0.265 kb on + strand at 0.266 kb on - strand at 0.327 kb on + strand at 0.327 kb on + strand at 0.328 kb on - strand at 0.345 kb on + strand at 0.345 kb on + strand at 0.346 kb on - strand at 0.424 kb on + strand at 0.424 kb on + strand at 0.424 kb on + strand at 0.424 kb on + strand at 0.424 kb on + strand at 0.425 kb on - strand at 0.425 kb on - strand at 0.425 kb on - strand at 0.425 kb on - strand at 0.425 kb on - strand at 0.551 kb on - strand, within GFF1791 at 0.551 kb on - strand, within GFF1791 at 0.715 kb on - strand, within GFF1791 at 0.792 kb on + strand at 0.792 kb on + strand at 0.796 kb on + strand at 0.797 kb on - strand at 0.797 kb on - strand at 0.797 kb on - strand at 0.854 kb on + strand at 0.854 kb on + strand at 0.854 kb on + strand at 0.854 kb on + strand at 0.854 kb on + strand at 0.854 kb on + strand at 0.854 kb on + strand at 0.854 kb on + strand at 0.855 kb on - strand at 0.855 kb on - strand at 0.855 kb on - strand at 0.855 kb on - strand at 0.855 kb on - strand at 0.856 kb on + strand at 0.856 kb on + strand at 0.856 kb on + strand at 0.856 kb on + strand at 0.856 kb on + strand at 0.857 kb on - strand at 0.857 kb on - strand at 0.857 kb on - strand at 0.857 kb on - strand at 0.857 kb on - strand at 0.857 kb on - strand at 0.913 kb on + strand at 0.913 kb on + strand at 0.913 kb on + strand at 0.913 kb on + strand at 0.913 kb on + strand at 0.913 kb on + strand at 0.913 kb on + strand at 0.913 kb on + strand at 0.913 kb on + strand at 0.914 kb on - strand at 0.914 kb on - strand at 0.914 kb on - strand at 0.914 kb on - strand at 0.914 kb on - strand at 0.960 kb on + strand at 0.960 kb on + strand at 0.960 kb on + strand at 0.961 kb on - strand at 0.961 kb on - strand at 0.961 kb on - strand at 0.961 kb on - strand at 0.961 kb on - strand at 1.123 kb on + strand, within GFF1792 at 1.123 kb on + strand, within GFF1792 at 1.123 kb on + strand, within GFF1792 at 1.123 kb on + strand, within GFF1792 at 1.123 kb on + strand, within GFF1792 at 1.124 kb on - strand, within GFF1792 at 1.124 kb on - strand, within GFF1792 at 1.124 kb on - strand, within GFF1792 at 1.124 kb on - strand, within GFF1792 at 1.124 kb on - strand, within GFF1792 at 1.170 kb on - strand, within GFF1792 at 1.172 kb on - strand, within GFF1792 at 1.172 kb on - strand, within GFF1792 at 1.417 kb on + strand, within GFF1792 at 1.417 kb on + strand, within GFF1792 at 1.417 kb on + strand, within GFF1792 at 1.417 kb on + strand, within GFF1792 at 1.621 kb on + strand, within GFF1792 at 1.621 kb on + strand, within GFF1792 at 1.621 kb on + strand, within GFF1792 at 1.621 kb on + strand, within GFF1792 at 1.622 kb on - strand, within GFF1792 at 1.622 kb on - strand, within GFF1792 at 1.622 kb on - strand, within GFF1792 at 1.772 kb on + strand at 1.772 kb on + strand at 1.772 kb on + strand at 1.779 kb on + strand at 1.780 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 70 + +0.6 74 + +0.2 74 + +0.8 74 + -0.6 74 + -1.8 88 + -0.2 116 + +0.1 117 - +0.5 185 + +0.6 240 + +0.4 240 + +0.3 240 + -0.3 240 + -0.3 240 + +0.9 241 - +0.1 241 - -1.2 265 + +0.7 266 - +0.9 327 + +0.2 327 + -0.8 328 - -0.3 345 + -0.7 345 + -1.7 346 - +0.6 424 + +1.5 424 + -0.6 424 + -0.7 424 + -0.2 424 + -0.3 425 - -1.0 425 - -1.2 425 - +0.2 425 - +1.1 425 - -0.7 551 - GFF1791 0.32 -0.4 551 - GFF1791 0.32 -0.7 715 - GFF1791 0.77 -0.9 792 + +0.1 792 + +0.8 796 + +1.1 797 - -0.1 797 - -0.9 797 - -0.6 854 + +0.0 854 + -1.1 854 + -1.6 854 + +0.3 854 + +0.0 854 + +0.0 854 + -1.0 854 + -0.6 855 - -0.6 855 - +1.9 855 - -0.2 855 - -0.4 855 - -0.4 856 + +1.6 856 + +0.8 856 + -0.5 856 + +0.5 856 + +0.6 857 - -3.3 857 - -1.1 857 - -0.7 857 - -0.5 857 - -1.1 857 - -0.7 913 + -0.8 913 + +0.3 913 + +0.1 913 + +0.2 913 + +1.2 913 + +0.0 913 + -1.3 913 + -0.2 913 + -1.6 914 - -0.4 914 - -0.5 914 - +1.1 914 - +0.5 914 - -0.2 960 + +0.0 960 + -0.1 960 + -0.6 961 - +0.2 961 - -2.0 961 - -0.6 961 - +0.7 961 - +0.7 1,123 + GFF1792 0.18 +1.0 1,123 + GFF1792 0.18 +0.4 1,123 + GFF1792 0.18 +1.0 1,123 + GFF1792 0.18 -1.1 1,123 + GFF1792 0.18 -0.7 1,124 - GFF1792 0.18 +0.0 1,124 - GFF1792 0.18 -0.3 1,124 - GFF1792 0.18 +0.2 1,124 - GFF1792 0.18 -0.2 1,124 - GFF1792 0.18 -0.5 1,170 - GFF1792 0.24 -0.7 1,172 - GFF1792 0.25 -0.0 1,172 - GFF1792 0.25 -0.1 1,417 + GFF1792 0.59 +0.2 1,417 + GFF1792 0.59 -1.5 1,417 + GFF1792 0.59 -0.3 1,417 + GFF1792 0.59 +0.7 1,621 + GFF1792 0.87 -0.2 1,621 + GFF1792 0.87 -0.3 1,621 + GFF1792 0.87 +0.1 1,621 + GFF1792 0.87 +0.6 1,622 - GFF1792 0.87 +0.2 1,622 - GFF1792 0.87 +0.1 1,622 - GFF1792 0.87 +0.6 1,772 + +0.3 1,772 + +1.4 1,772 + -0.1 1,779 + -0.5 1,780 - +0.4
Or see this region's nucleotide sequence