Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1173 and GFF1174 overlap by 11 nucleotides GFF1174 and GFF1175 are separated by 37 nucleotides GFF1175 and GFF1176 are separated by 157 nucleotides
GFF1173 - putative HTH-type transcriptional regulator, at 511,476 to 511,862
GFF1173
GFF1174 - hypothetical protein, at 511,852 to 512,325
GFF1174
GFF1175 - HTH-type transcriptional regulator DmlR, at 512,363 to 513,277
GFF1175
GFF1176 - Alcohol dehydrogenase, at 513,435 to 514,445
GFF1176
Position (kb) 512
513
514 Strain fitness (log2 ratio) -2
-1
0
1
2 at 511.434 kb on - strand at 511.445 kb on + strand at 511.445 kb on + strand at 511.445 kb on + strand at 511.464 kb on + strand at 511.464 kb on + strand at 511.542 kb on + strand, within GFF1173 at 511.602 kb on + strand, within GFF1173 at 511.603 kb on - strand, within GFF1173 at 511.822 kb on - strand, within GFF1173 at 511.822 kb on - strand, within GFF1173 at 512.025 kb on + strand, within GFF1174 at 512.240 kb on + strand, within GFF1174 at 512.242 kb on + strand, within GFF1174 at 512.242 kb on + strand, within GFF1174 at 512.243 kb on - strand, within GFF1174 at 512.243 kb on - strand, within GFF1174 at 512.271 kb on + strand, within GFF1174 at 512.274 kb on - strand, within GFF1174 at 512.316 kb on + strand at 512.324 kb on - strand at 512.386 kb on - strand at 512.595 kb on + strand, within GFF1175 at 512.595 kb on + strand, within GFF1175 at 512.596 kb on - strand, within GFF1175 at 512.596 kb on - strand, within GFF1175 at 512.596 kb on - strand, within GFF1175 at 512.637 kb on + strand, within GFF1175 at 513.122 kb on - strand, within GFF1175 at 513.170 kb on - strand, within GFF1175 at 513.171 kb on + strand, within GFF1175 at 513.172 kb on - strand, within GFF1175 at 513.172 kb on - strand, within GFF1175 at 513.269 kb on + strand at 513.269 kb on + strand at 513.299 kb on + strand at 513.582 kb on + strand, within GFF1176 at 513.582 kb on + strand, within GFF1176 at 513.582 kb on + strand, within GFF1176 at 513.582 kb on + strand, within GFF1176 at 513.582 kb on + strand, within GFF1176 at 513.583 kb on - strand, within GFF1176 at 513.747 kb on + strand, within GFF1176 at 513.748 kb on - strand, within GFF1176 at 513.786 kb on + strand, within GFF1176 at 513.786 kb on + strand, within GFF1176 at 513.786 kb on + strand, within GFF1176 at 513.787 kb on - strand, within GFF1176 at 513.882 kb on + strand, within GFF1176 at 514.065 kb on + strand, within GFF1176 at 514.066 kb on - strand, within GFF1176 at 514.172 kb on - strand, within GFF1176
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 511,434 - -0.7 511,445 + -0.6 511,445 + -1.1 511,445 + +0.4 511,464 + +0.9 511,464 + +0.8 511,542 + GFF1173 0.17 -0.2 511,602 + GFF1173 0.33 +0.2 511,603 - GFF1173 0.33 +0.2 511,822 - GFF1173 0.89 -0.1 511,822 - GFF1173 0.89 -0.2 512,025 + GFF1174 0.36 +0.8 512,240 + GFF1174 0.82 -0.2 512,242 + GFF1174 0.82 -0.6 512,242 + GFF1174 0.82 +0.7 512,243 - GFF1174 0.82 -0.8 512,243 - GFF1174 0.82 -0.0 512,271 + GFF1174 0.88 +1.4 512,274 - GFF1174 0.89 +0.4 512,316 + -0.1 512,324 - -0.4 512,386 - -0.9 512,595 + GFF1175 0.25 +0.8 512,595 + GFF1175 0.25 +1.2 512,596 - GFF1175 0.25 +0.0 512,596 - GFF1175 0.25 +0.5 512,596 - GFF1175 0.25 +0.9 512,637 + GFF1175 0.30 +0.0 513,122 - GFF1175 0.83 -0.2 513,170 - GFF1175 0.88 +0.3 513,171 + GFF1175 0.88 -0.0 513,172 - GFF1175 0.88 +1.0 513,172 - GFF1175 0.88 -0.7 513,269 + -1.0 513,269 + +0.9 513,299 + -0.9 513,582 + GFF1176 0.15 +1.9 513,582 + GFF1176 0.15 +0.4 513,582 + GFF1176 0.15 -0.7 513,582 + GFF1176 0.15 -1.8 513,582 + GFF1176 0.15 -0.7 513,583 - GFF1176 0.15 -0.0 513,747 + GFF1176 0.31 -1.1 513,748 - GFF1176 0.31 +1.2 513,786 + GFF1176 0.35 +1.3 513,786 + GFF1176 0.35 -0.1 513,786 + GFF1176 0.35 -2.3 513,787 - GFF1176 0.35 +0.1 513,882 + GFF1176 0.44 -1.6 514,065 + GFF1176 0.62 -0.6 514,066 - GFF1176 0.62 -0.9 514,172 - GFF1176 0.73 -0.8
Or see this region's nucleotide sequence