Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1131 and GFF1132 overlap by 14 nucleotides GFF1132 and GFF1133 overlap by 18 nucleotides GFF1133 and GFF1134 are separated by 51 nucleotides GFF1134 and GFF1135 are separated by 87 nucleotides
GFF1131 - hypothetical protein, at 471,477 to 472,604
GFF1131
GFF1132 - hypothetical protein, at 472,591 to 473,103
GFF1132
GFF1133 - hypothetical protein, at 473,086 to 473,538
GFF1133
GFF1134 - IS5 family transposase IS4811, at 473,590 to 474,510
GFF1134
GFF1135 - hypothetical protein, at 474,598 to 475,566
GFF1135
Position (kb) 473
474
475 Strain fitness (log2 ratio) -1
0
1
2 at 472.613 kb on - strand at 472.613 kb on - strand at 472.627 kb on + strand at 472.627 kb on + strand at 472.627 kb on + strand at 472.627 kb on + strand at 472.627 kb on + strand at 472.628 kb on - strand at 472.628 kb on - strand at 472.628 kb on - strand at 472.637 kb on + strand at 472.638 kb on - strand at 472.638 kb on - strand at 472.678 kb on + strand, within GFF1132 at 472.678 kb on + strand, within GFF1132 at 472.678 kb on + strand, within GFF1132 at 472.678 kb on + strand, within GFF1132 at 472.679 kb on - strand, within GFF1132 at 472.679 kb on - strand, within GFF1132 at 472.679 kb on - strand, within GFF1132 at 472.684 kb on + strand, within GFF1132 at 472.684 kb on + strand, within GFF1132 at 472.758 kb on + strand, within GFF1132 at 472.758 kb on + strand, within GFF1132 at 472.758 kb on + strand, within GFF1132 at 472.758 kb on + strand, within GFF1132 at 472.758 kb on + strand, within GFF1132 at 472.759 kb on - strand, within GFF1132 at 472.805 kb on - strand, within GFF1132 at 472.953 kb on + strand, within GFF1132 at 472.987 kb on + strand, within GFF1132 at 472.987 kb on + strand, within GFF1132 at 472.987 kb on + strand, within GFF1132 at 472.988 kb on - strand, within GFF1132 at 473.147 kb on + strand, within GFF1133 at 473.147 kb on + strand, within GFF1133 at 473.148 kb on - strand, within GFF1133 at 473.189 kb on + strand, within GFF1133 at 473.190 kb on - strand, within GFF1133 at 473.190 kb on - strand, within GFF1133 at 473.297 kb on + strand, within GFF1133 at 473.573 kb on + strand at 473.573 kb on + strand at 473.574 kb on - strand at 473.591 kb on + strand at 473.591 kb on + strand at 473.592 kb on - strand at 473.592 kb on - strand at 473.593 kb on + strand at 473.593 kb on + strand at 473.593 kb on + strand at 473.593 kb on + strand at 473.594 kb on - strand at 473.594 kb on - strand at 473.594 kb on - strand at 473.594 kb on - strand at 473.594 kb on - strand at 473.762 kb on + strand, within GFF1134 at 473.777 kb on - strand, within GFF1134 at 474.105 kb on + strand, within GFF1134 at 474.276 kb on + strand, within GFF1134 at 474.530 kb on - strand at 474.553 kb on + strand at 474.576 kb on + strand at 474.577 kb on - strand at 474.710 kb on - strand, within GFF1135 at 474.735 kb on - strand, within GFF1135 at 474.765 kb on + strand, within GFF1135 at 474.783 kb on + strand, within GFF1135 at 474.784 kb on - strand, within GFF1135 at 475.150 kb on + strand, within GFF1135 at 475.209 kb on + strand, within GFF1135 at 475.426 kb on + strand, within GFF1135
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 472,613 - -0.2 472,613 - +0.9 472,627 + +0.6 472,627 + -0.2 472,627 + -0.0 472,627 + -0.2 472,627 + +0.6 472,628 - -0.5 472,628 - -0.8 472,628 - +0.6 472,637 + -0.2 472,638 - -1.1 472,638 - -0.6 472,678 + GFF1132 0.17 -0.7 472,678 + GFF1132 0.17 -1.5 472,678 + GFF1132 0.17 -0.0 472,678 + GFF1132 0.17 +1.5 472,679 - GFF1132 0.17 +1.2 472,679 - GFF1132 0.17 -1.6 472,679 - GFF1132 0.17 +0.5 472,684 + GFF1132 0.18 -0.4 472,684 + GFF1132 0.18 +0.6 472,758 + GFF1132 0.33 +0.8 472,758 + GFF1132 0.33 +0.3 472,758 + GFF1132 0.33 +0.1 472,758 + GFF1132 0.33 -0.7 472,758 + GFF1132 0.33 -0.1 472,759 - GFF1132 0.33 -0.1 472,805 - GFF1132 0.42 +0.6 472,953 + GFF1132 0.71 -0.6 472,987 + GFF1132 0.77 -0.8 472,987 + GFF1132 0.77 -0.8 472,987 + GFF1132 0.77 +0.8 472,988 - GFF1132 0.77 +0.5 473,147 + GFF1133 0.13 -0.2 473,147 + GFF1133 0.13 +0.2 473,148 - GFF1133 0.14 +0.2 473,189 + GFF1133 0.23 +0.3 473,190 - GFF1133 0.23 +0.2 473,190 - GFF1133 0.23 +0.3 473,297 + GFF1133 0.47 -0.2 473,573 + +1.8 473,573 + +0.5 473,574 - +1.3 473,591 + +1.3 473,591 + -0.9 473,592 - +0.2 473,592 - -0.6 473,593 + -0.4 473,593 + -0.0 473,593 + -0.1 473,593 + +0.7 473,594 - -1.3 473,594 - +0.1 473,594 - -0.7 473,594 - +0.9 473,594 - -0.6 473,762 + GFF1134 0.19 +0.5 473,777 - GFF1134 0.20 -0.9 474,105 + GFF1134 0.56 +1.3 474,276 + GFF1134 0.74 +0.8 474,530 - +1.7 474,553 + +0.0 474,576 + -0.2 474,577 - +1.2 474,710 - GFF1135 0.12 +0.2 474,735 - GFF1135 0.14 +0.1 474,765 + GFF1135 0.17 -0.2 474,783 + GFF1135 0.19 -0.3 474,784 - GFF1135 0.19 -0.3 475,150 + GFF1135 0.57 +0.5 475,209 + GFF1135 0.63 -1.6 475,426 + GFF1135 0.85 -1.1
Or see this region's nucleotide sequence