Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1118 and GFF1119 are separated by 299 nucleotides GFF1119 and GFF1120 overlap by 1 nucleotides GFF1120 and GFF1121 overlap by 4 nucleotides
GFF1118 - Putative multidrug export ATP-binding/permease protein, at 458,933 to 460,789
GFF1118
GFF1119 - hypothetical protein, at 461,089 to 461,739
GFF1119
GFF1120 - hypothetical protein, at 461,739 to 462,167
GFF1120
GFF1121 - hypothetical protein, at 462,164 to 462,976
GFF1121
Position (kb) 461
462 Strain fitness (log2 ratio) -2
-1
0
1 at 460.107 kb on + strand, within GFF1118 at 460.108 kb on - strand, within GFF1118 at 460.188 kb on + strand, within GFF1118 at 460.188 kb on + strand, within GFF1118 at 460.188 kb on + strand, within GFF1118 at 460.189 kb on - strand, within GFF1118 at 460.189 kb on - strand, within GFF1118 at 460.189 kb on - strand, within GFF1118 at 460.284 kb on + strand, within GFF1118 at 460.285 kb on - strand, within GFF1118 at 460.635 kb on + strand at 460.636 kb on - strand at 460.831 kb on + strand at 460.857 kb on + strand at 460.857 kb on + strand at 460.857 kb on + strand at 460.857 kb on + strand at 460.858 kb on - strand at 460.858 kb on - strand at 460.858 kb on - strand at 461.016 kb on + strand at 461.016 kb on + strand at 461.016 kb on + strand at 461.016 kb on + strand at 461.016 kb on + strand at 461.016 kb on + strand at 461.017 kb on - strand at 461.017 kb on - strand at 461.017 kb on - strand at 461.046 kb on + strand at 461.046 kb on + strand at 461.046 kb on + strand at 461.094 kb on + strand at 461.255 kb on + strand, within GFF1119 at 461.256 kb on - strand, within GFF1119 at 461.256 kb on - strand, within GFF1119 at 461.256 kb on - strand, within GFF1119 at 461.329 kb on + strand, within GFF1119 at 461.594 kb on - strand, within GFF1119 at 461.957 kb on + strand, within GFF1120 at 461.957 kb on + strand, within GFF1120 at 461.960 kb on + strand, within GFF1120 at 461.960 kb on + strand, within GFF1120 at 461.960 kb on + strand, within GFF1120 at 461.983 kb on - strand, within GFF1120 at 461.993 kb on + strand, within GFF1120 at 461.993 kb on + strand, within GFF1120 at 461.993 kb on + strand, within GFF1120 at 461.993 kb on + strand, within GFF1120 at 461.993 kb on + strand, within GFF1120 at 461.993 kb on + strand, within GFF1120 at 461.993 kb on + strand, within GFF1120 at 461.994 kb on - strand, within GFF1120 at 461.994 kb on - strand, within GFF1120 at 462.453 kb on - strand, within GFF1121 at 462.544 kb on + strand, within GFF1121
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 460,107 + GFF1118 0.63 +0.2 460,108 - GFF1118 0.63 +1.5 460,188 + GFF1118 0.68 +0.1 460,188 + GFF1118 0.68 -0.4 460,188 + GFF1118 0.68 +0.4 460,189 - GFF1118 0.68 +0.6 460,189 - GFF1118 0.68 -0.8 460,189 - GFF1118 0.68 -0.7 460,284 + GFF1118 0.73 +0.2 460,285 - GFF1118 0.73 -0.7 460,635 + -0.3 460,636 - -0.3 460,831 + +0.5 460,857 + +0.2 460,857 + +0.9 460,857 + +0.2 460,857 + -0.3 460,858 - +0.2 460,858 - -0.8 460,858 - +0.2 461,016 + +0.5 461,016 + -1.1 461,016 + -0.7 461,016 + -1.2 461,016 + -0.9 461,016 + -0.5 461,017 - -0.2 461,017 - +0.9 461,017 - -0.5 461,046 + +0.5 461,046 + +0.7 461,046 + -1.8 461,094 + +1.3 461,255 + GFF1119 0.25 +0.2 461,256 - GFF1119 0.26 +0.2 461,256 - GFF1119 0.26 -0.3 461,256 - GFF1119 0.26 +1.1 461,329 + GFF1119 0.37 +0.3 461,594 - GFF1119 0.78 +0.2 461,957 + GFF1120 0.51 -0.1 461,957 + GFF1120 0.51 -0.1 461,960 + GFF1120 0.52 -0.7 461,960 + GFF1120 0.52 +0.2 461,960 + GFF1120 0.52 -1.3 461,983 - GFF1120 0.57 -0.6 461,993 + GFF1120 0.59 +0.1 461,993 + GFF1120 0.59 -0.0 461,993 + GFF1120 0.59 -0.7 461,993 + GFF1120 0.59 -0.1 461,993 + GFF1120 0.59 +0.5 461,993 + GFF1120 0.59 +1.0 461,993 + GFF1120 0.59 +0.2 461,994 - GFF1120 0.59 +1.0 461,994 - GFF1120 0.59 -1.3 462,453 - GFF1121 0.36 -0.8 462,544 + GFF1121 0.47 +0.5
Or see this region's nucleotide sequence