Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1077 and GFF1078 are separated by 7 nucleotides GFF1078 and GFF1079 are separated by 86 nucleotides GFF1079 and GFF1080 are separated by 41 nucleotides
GFF1077 - hypothetical protein, at 421,559 to 422,077
GFF1077
GFF1078 - hypothetical protein, at 422,085 to 422,540
GFF1078
GFF1079 - hypothetical protein, at 422,627 to 422,854
GFF1079
GFF1080 - Alcohol dehydrogenase, at 422,896 to 424,065
GFF1080
Position (kb) 422
423 Strain fitness (log2 ratio) -1
0
1
2 at 421.913 kb on - strand, within GFF1077 at 421.979 kb on + strand, within GFF1077 at 421.980 kb on - strand, within GFF1077 at 422.069 kb on + strand at 422.069 kb on + strand at 422.070 kb on - strand at 422.070 kb on - strand at 422.070 kb on - strand at 422.070 kb on - strand at 422.075 kb on + strand at 422.076 kb on - strand at 422.076 kb on - strand at 422.076 kb on - strand at 422.116 kb on - strand at 422.248 kb on + strand, within GFF1078 at 422.273 kb on + strand, within GFF1078 at 422.455 kb on + strand, within GFF1078 at 422.456 kb on - strand, within GFF1078 at 422.456 kb on - strand, within GFF1078 at 422.456 kb on - strand, within GFF1078 at 422.456 kb on - strand, within GFF1078 at 422.603 kb on + strand at 422.603 kb on + strand at 422.603 kb on + strand at 422.603 kb on + strand at 422.604 kb on - strand at 422.604 kb on - strand at 422.604 kb on - strand at 422.604 kb on - strand at 422.604 kb on - strand at 422.763 kb on + strand, within GFF1079 at 422.764 kb on - strand, within GFF1079 at 422.764 kb on - strand, within GFF1079 at 422.845 kb on + strand at 422.846 kb on - strand at 422.853 kb on - strand at 422.853 kb on - strand at 422.853 kb on - strand at 422.910 kb on - strand at 422.910 kb on - strand at 423.123 kb on + strand, within GFF1080 at 423.193 kb on + strand, within GFF1080 at 423.228 kb on + strand, within GFF1080 at 423.382 kb on - strand, within GFF1080 at 423.845 kb on + strand, within GFF1080 at 423.845 kb on + strand, within GFF1080 at 423.845 kb on + strand, within GFF1080 at 423.846 kb on - strand, within GFF1080
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 421,913 - GFF1077 0.68 +0.2 421,979 + GFF1077 0.81 +1.2 421,980 - GFF1077 0.81 +0.7 422,069 + -0.4 422,069 + +0.4 422,070 - +0.7 422,070 - +0.4 422,070 - -0.1 422,070 - -1.4 422,075 + -0.4 422,076 - +0.7 422,076 - -1.1 422,076 - +0.5 422,116 - -0.1 422,248 + GFF1078 0.36 -0.1 422,273 + GFF1078 0.41 -1.5 422,455 + GFF1078 0.81 +1.0 422,456 - GFF1078 0.81 -0.0 422,456 - GFF1078 0.81 -0.4 422,456 - GFF1078 0.81 -0.1 422,456 - GFF1078 0.81 +0.3 422,603 + -1.4 422,603 + +0.1 422,603 + -1.0 422,603 + +0.0 422,604 - +0.4 422,604 - -1.1 422,604 - +0.0 422,604 - -0.3 422,604 - -0.7 422,763 + GFF1079 0.60 +0.2 422,764 - GFF1079 0.60 +2.0 422,764 - GFF1079 0.60 +0.2 422,845 + +0.2 422,846 - +2.0 422,853 - +1.6 422,853 - -0.6 422,853 - +0.2 422,910 - +0.2 422,910 - +0.8 423,123 + GFF1080 0.19 -0.8 423,193 + GFF1080 0.25 -1.3 423,228 + GFF1080 0.28 -0.7 423,382 - GFF1080 0.42 +0.7 423,845 + GFF1080 0.81 -1.5 423,845 + GFF1080 0.81 -0.3 423,845 + GFF1080 0.81 +0.4 423,846 - GFF1080 0.81 -0.5
Or see this region's nucleotide sequence