Strain Fitness in Escherichia coli ECRC102 around NIAGMN_21030

Experiment: TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP9
4,166,422	+				+0.9
4,166,422	+				+1.8
4,166,423	-				+0.8
4,166,462	+				-0.2
4,166,537	-				-1.5
4,166,537	-				-0.0
4,166,645	+	napG	NIAGMN_21025	0.14	-1.8
4,166,771	+	napG	NIAGMN_21025	0.32	-1.7
4,166,815	+	napG	NIAGMN_21025	0.39	+0.2
4,166,815	+	napG	NIAGMN_21025	0.39	+1.8
4,166,939	+	napG	NIAGMN_21025	0.57	+0.6
4,167,103	-	napG	NIAGMN_21025	0.80	-0.6
4,167,128	+	napG	NIAGMN_21025	0.84	-2.0
4,167,161	+	napG	NIAGMN_21025	0.89	-0.1
4,167,188	+				+0.8
4,167,189	-				+0.2
4,167,239	-				-0.2
4,167,306	+				-0.2
4,167,306	+				+2.0
4,167,306	+				-0.4
4,167,642	-	napH	NIAGMN_21030	0.48	-0.1
4,167,739	-	napH	NIAGMN_21030	0.59	+2.5
4,167,766	+	napH	NIAGMN_21030	0.62	+0.8
4,167,845	+	napH	NIAGMN_21030	0.72	+0.2
4,167,845	+	napH	NIAGMN_21030	0.72	+1.8
4,167,913	+	napH	NIAGMN_21030	0.79	+0.2
4,167,951	+	napH	NIAGMN_21030	0.84	-2.6
4,167,951	+	napH	NIAGMN_21030	0.84	-0.4
4,168,047	+				+0.7
4,168,047	+				+0.1
4,168,047	+				-0.3
4,168,047	+				-2.6
4,168,047	+				-1.0
4,168,052	-				-0.6
4,168,056	+				+1.2
4,168,060	+				+1.5
4,168,060	+				+0.5
4,168,264	+	napH	NIAGMN_21035	0.39	+1.7
4,168,264	+	napH	NIAGMN_21035	0.39	-1.1
4,168,393	-	napH	NIAGMN_21035	0.68	-1.0
4,168,402	-	napH	NIAGMN_21035	0.70	-1.6
4,168,448	-	napH	NIAGMN_21035	0.80	-0.1
4,168,470	-	napH	NIAGMN_21035	0.85	+0.7
4,168,535	-				+2.7
4,168,542	+				-0.2
4,168,543	-				-0.6
4,168,543	-				-0.3
4,168,563	+				-0.5
4,168,677	+	napC	NIAGMN_21040	0.22	+0.1
4,168,719	+	napC	NIAGMN_21040	0.29	+1.7
4,168,719	+	napC	NIAGMN_21040	0.29	+1.7
4,168,720	-	napC	NIAGMN_21040	0.29	+1.0
4,168,757	-	napC	NIAGMN_21040	0.35	+0.7
4,168,866	+	napC	NIAGMN_21040	0.53	-0.1
4,168,866	+	napC	NIAGMN_21040	0.53	-0.1
4,168,866	+	napC	NIAGMN_21040	0.53	+1.3
4,168,866	+	napC	NIAGMN_21040	0.53	+0.1
4,168,867	-	napC	NIAGMN_21040	0.53	-0.5
4,168,867	-	napC	NIAGMN_21040	0.53	-0.4
4,168,876	+	napC	NIAGMN_21040	0.55	-0.4
4,168,971	+	napC	NIAGMN_21040	0.70	-0.9
4,168,971	+	napC	NIAGMN_21040	0.70	+0.1
4,168,971	+	napC	NIAGMN_21040	0.70	-0.1
4,168,989	+	napC	NIAGMN_21040	0.73	+1.7
4,168,989	+	napC	NIAGMN_21040	0.73	-1.4
4,169,010	+	napC	NIAGMN_21040	0.77	-0.3
4,169,010	+	napC	NIAGMN_21040	0.77	+0.1
4,169,010	+	napC	NIAGMN_21040	0.77	+0.1
4,169,016	+	napC	NIAGMN_21040	0.78	-0.2
4,169,016	+	napC	NIAGMN_21040	0.78	-0.1
4,169,016	+	napC	NIAGMN_21040	0.78	+0.4