Strain Fitness in Escherichia coli ECRC102 around NIAGMN_20745

Experiment: TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP9
4,097,613	+				-0.9
4,097,616	+				+0.1
4,097,661	+	pmrD	NIAGMN_20730	0.15	-0.2
4,097,672	+	pmrD	NIAGMN_20730	0.19	+0.2
4,097,672	+	pmrD	NIAGMN_20730	0.19	+0.7
4,097,672	+	pmrD	NIAGMN_20730	0.19	-0.2
4,097,672	+	pmrD	NIAGMN_20730	0.19	-0.2
4,097,672	+	pmrD	NIAGMN_20730	0.19	+0.6
4,097,672	+	pmrD	NIAGMN_20730	0.19	-0.8
4,097,672	+	pmrD	NIAGMN_20730	0.19	-1.6
4,097,672	+	pmrD	NIAGMN_20730	0.19	+1.3
4,097,672	+	pmrD	NIAGMN_20730	0.19	-0.7
4,097,672	+	pmrD	NIAGMN_20730	0.19	-1.2
4,097,672	+	pmrD	NIAGMN_20730	0.19	+0.8
4,097,672	+	pmrD	NIAGMN_20730	0.19	-0.6
4,097,672	+	pmrD	NIAGMN_20730	0.19	-1.3
4,097,672	+	pmrD	NIAGMN_20730	0.19	+0.8
4,097,672	+	pmrD	NIAGMN_20730	0.19	-0.3
4,097,673	-	pmrD	NIAGMN_20730	0.20	+1.2
4,097,785	-	pmrD	NIAGMN_20730	0.62	+0.1
4,097,805	+	pmrD	NIAGMN_20730	0.69	-1.0
4,097,805	+	pmrD	NIAGMN_20730	0.69	+0.4
4,097,833	+	pmrD	NIAGMN_20730	0.80	+1.4
4,097,834	-	pmrD	NIAGMN_20730	0.80	-0.6
4,097,835	+	pmrD	NIAGMN_20730	0.81	+0.3
4,097,930	+	arnF	NIAGMN_20735	0.13	+0.8
4,097,931	-	arnF	NIAGMN_20735	0.13	+0.9
4,097,933	+	arnF	NIAGMN_20735	0.14	+0.8
4,097,933	+	arnF	NIAGMN_20735	0.14	+0.9
4,097,988	+	arnF	NIAGMN_20735	0.28	+3.1
4,098,016	+	arnF	NIAGMN_20735	0.35	+0.2
4,098,023	+	arnF	NIAGMN_20735	0.37	+1.2
4,098,247	-				-0.1
4,098,275	-				-1.3
4,098,357	-	arnE	NIAGMN_20740	0.27	-0.8
4,098,565	+	arnE	NIAGMN_20740	0.89	-0.6
4,098,585	-				+0.6
4,098,711	+				+0.5
4,098,715	-				+2.0
4,098,796	-	arnT	NIAGMN_20745	0.12	+2.8
4,098,796	-	arnT	NIAGMN_20745	0.12	+2.0
4,098,804	-	arnT	NIAGMN_20745	0.12	-0.2
4,098,886	-	arnT	NIAGMN_20745	0.17	-1.4
4,098,898	-	arnT	NIAGMN_20745	0.18	+1.1
4,099,059	-	arnT	NIAGMN_20745	0.28	+0.8
4,099,059	-	arnT	NIAGMN_20745	0.28	-0.5
4,099,111	-	arnT	NIAGMN_20745	0.31	+0.8
4,099,112	+	arnT	NIAGMN_20745	0.31	+0.8
4,099,306	-	arnT	NIAGMN_20745	0.43	+0.2
4,099,307	+	arnT	NIAGMN_20745	0.43	+1.2
4,099,326	+	arnT	NIAGMN_20745	0.44	-0.8
4,099,374	-	arnT	NIAGMN_20745	0.47	+1.3
4,099,413	-	arnT	NIAGMN_20745	0.49	+0.2
4,099,414	+	arnT	NIAGMN_20745	0.49	+0.2
4,099,415	-	arnT	NIAGMN_20745	0.49	+0.8
4,099,473	-	arnT	NIAGMN_20745	0.53	+1.2
4,099,492	-	arnT	NIAGMN_20745	0.54	+1.8
4,099,685	-	arnT	NIAGMN_20745	0.66	-0.2
4,099,754	-	arnT	NIAGMN_20745	0.70	-0.6
4,099,875	-	arnT	NIAGMN_20745	0.77	+1.6
4,099,881	+	arnT	NIAGMN_20745	0.78	+0.5
4,099,900	+	arnT	NIAGMN_20745	0.79	+1.8
4,099,900	+	arnT	NIAGMN_20745	0.79	-0.9
4,100,013	+	arnT	NIAGMN_20745	0.86	+0.2
4,100,084	-	arnT	NIAGMN_20745	0.90	-0.4
4,100,170	+				+0.2
4,100,198	+				+0.8
4,100,199	-				-1.0
4,100,202	-				+0.8
4,100,452	+	arnD	NIAGMN_20750	0.23	+1.1
4,100,453	-	arnD	NIAGMN_20750	0.23	+1.5
4,100,892	-	arnD	NIAGMN_20750	0.72	-0.8
4,101,050	+	arnD	NIAGMN_20750	0.90	+0.2
4,101,051	-	arnD	NIAGMN_20750	0.90	-0.8
4,101,051	-	arnD	NIAGMN_20750	0.90	-0.0
4,101,051	-	arnD	NIAGMN_20750	0.90	-0.2
4,101,124	-				-1.0