Strain Fitness in Escherichia coli ECRC102 around NIAGMN_14810

Experiment: TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP9
2,952,669	+	greB	NIAGMN_14800	0.88	-1.0
2,952,669	+	greB	NIAGMN_14800	0.88	+0.4
2,952,669	+	greB	NIAGMN_14800	0.88	-0.0
2,952,669	+	greB	NIAGMN_14800	0.88	-0.0
2,952,669	+	greB	NIAGMN_14800	0.88	+0.6
2,952,670	-	greB	NIAGMN_14800	0.89	+0.1
2,952,670	-	greB	NIAGMN_14800	0.89	-1.1
2,952,750	+				+0.9
2,952,766	+				+1.0
2,952,767	-				-2.4
2,952,767	-				-0.7
2,952,767	-				-0.3
2,952,767	-				+1.3
2,952,768	+				+1.0
2,952,769	-				-0.3
2,952,769	-				-2.3
2,952,769	-				+0.7
2,952,778	+				+0.4
2,952,779	+				-1.4
2,952,779	+				-0.3
2,952,779	+				+2.0
2,952,780	-				-1.3
2,952,816	+				-0.6
2,952,816	+				+0.6
2,952,822	+				-0.8
2,952,823	-				+0.4
2,952,838	-				+1.0
2,952,877	+				-1.2
2,952,903	+				+0.7
2,952,909	+				-1.5
2,952,909	+				-0.0
2,952,910	-				-0.8
2,952,917	+				-0.9
2,952,917	+				+0.5
2,952,917	+				-1.9
2,952,943	+				-0.0
2,952,963	+				+3.0
2,952,964	-				+1.0
2,953,017	+				-0.3
2,953,017	+				-0.3
2,953,103	+	ompR_G63V	NIAGMN_14805	0.21	-1.0
2,953,103	+	ompR_G63V	NIAGMN_14805	0.21	-0.6
2,953,103	+	ompR_G63V	NIAGMN_14805	0.21	-1.5
2,953,104	-	ompR_G63V	NIAGMN_14805	0.21	+1.0
2,953,118	-	ompR_G63V	NIAGMN_14805	0.23	+0.4
2,953,123	+	ompR_G63V	NIAGMN_14805	0.24	-1.8
2,953,123	+	ompR_G63V	NIAGMN_14805	0.24	+0.4
2,953,123	+	ompR_G63V	NIAGMN_14805	0.24	-0.0
2,953,254	+	ompR_G63V	NIAGMN_14805	0.42	+1.4
2,953,360	+	ompR_G63V	NIAGMN_14805	0.57	-0.3
2,953,638	+				+3.0
2,953,639	-				-1.3
2,953,639	-				-1.2
2,953,662	-				+0.4
2,953,708	+				+0.4
2,953,708	+				-1.0
2,953,713	+				+2.0
2,953,713	+				+2.0
2,953,713	+				-2.8
2,953,714	-				-0.5
2,953,757	+				+3.3
2,953,757	+				-0.6
2,953,757	+				-0.1
2,953,758	-				-1.5
2,953,758	-				+3.6
2,953,804	+	envZ	NIAGMN_14810	0.10	+0.4
2,953,807	+	envZ	NIAGMN_14810	0.10	-0.0
2,953,831	+	envZ	NIAGMN_14810	0.12	-0.3
2,953,832	-	envZ	NIAGMN_14810	0.12	+0.8
2,953,832	-	envZ	NIAGMN_14810	0.12	-1.2
2,953,832	-	envZ	NIAGMN_14810	0.12	-1.2
2,953,832	-	envZ	NIAGMN_14810	0.12	+0.4
2,953,908	-	envZ	NIAGMN_14810	0.18	-0.3
2,953,908	-	envZ	NIAGMN_14810	0.18	-2.2
2,953,931	+	envZ	NIAGMN_14810	0.20	-0.6
2,953,979	+	envZ	NIAGMN_14810	0.23	-0.3
2,953,980	-	envZ	NIAGMN_14810	0.23	+1.0
2,953,990	-	envZ	NIAGMN_14810	0.24	-0.5
2,954,092	+	envZ	NIAGMN_14810	0.31	-0.7
2,954,093	-	envZ	NIAGMN_14810	0.31	-0.3
2,954,153	+	envZ	NIAGMN_14810	0.36	-0.0
2,954,154	-	envZ	NIAGMN_14810	0.36	-0.0
2,954,155	+	envZ	NIAGMN_14810	0.36	+1.4
2,954,155	+	envZ	NIAGMN_14810	0.36	-0.5
2,954,155	+	envZ	NIAGMN_14810	0.36	-1.9
2,954,155	+	envZ	NIAGMN_14810	0.36	-0.6
2,954,155	+	envZ	NIAGMN_14810	0.36	-1.3
2,954,156	-	envZ	NIAGMN_14810	0.36	+0.4
2,954,156	-	envZ	NIAGMN_14810	0.36	-2.1
2,954,156	-	envZ	NIAGMN_14810	0.36	+1.2
2,954,167	+	envZ	NIAGMN_14810	0.37	+0.4
2,954,167	+	envZ	NIAGMN_14810	0.37	-1.0
2,954,167	+	envZ	NIAGMN_14810	0.37	-0.6
2,954,257	+	envZ	NIAGMN_14810	0.44	-0.0
2,954,258	-	envZ	NIAGMN_14810	0.44	+1.0
2,954,266	+	envZ	NIAGMN_14810	0.44	-0.0
2,954,288	+	envZ	NIAGMN_14810	0.46	-0.2
2,954,289	-	envZ	NIAGMN_14810	0.46	-2.2
2,954,289	-	envZ	NIAGMN_14810	0.46	-1.3
2,954,332	+	envZ	NIAGMN_14810	0.49	-1.0
2,954,333	-	envZ	NIAGMN_14810	0.49	-1.7
2,954,348	-	envZ	NIAGMN_14810	0.50	-1.8
2,954,404	+	envZ	NIAGMN_14810	0.54	+0.5
2,954,420	-	envZ	NIAGMN_14810	0.56	+1.3
2,954,460	-	envZ	NIAGMN_14810	0.59	-1.0
2,954,479	+	envZ	NIAGMN_14810	0.60	-0.6
2,954,479	+	envZ	NIAGMN_14810	0.60	-0.8
2,954,480	-	envZ	NIAGMN_14810	0.60	+0.4
2,954,485	+	envZ	NIAGMN_14810	0.60	-0.0
2,954,519	-	envZ	NIAGMN_14810	0.63	+1.4
2,954,577	+	envZ	NIAGMN_14810	0.67	-0.3
2,954,590	+	envZ	NIAGMN_14810	0.68	+0.4
2,954,815	+	envZ	NIAGMN_14810	0.85	-1.7
2,954,815	+	envZ	NIAGMN_14810	0.85	-1.0
2,954,815	+	envZ	NIAGMN_14810	0.85	+0.4
2,954,815	+	envZ	NIAGMN_14810	0.85	-1.5
2,954,815	+	envZ	NIAGMN_14810	0.85	-1.9
2,954,815	+	envZ	NIAGMN_14810	0.85	-0.3
2,954,815	+	envZ	NIAGMN_14810	0.85	-1.5
2,954,815	+	envZ	NIAGMN_14810	0.85	-0.6
2,954,815	+	envZ	NIAGMN_14810	0.85	-0.0
2,954,815	+	envZ	NIAGMN_14810	0.85	-1.0
2,954,815	+	envZ	NIAGMN_14810	0.85	+1.1
2,954,815	+	envZ	NIAGMN_14810	0.85	-2.2
2,954,815	+	envZ	NIAGMN_14810	0.85	+0.4
2,954,816	-	envZ	NIAGMN_14810	0.85	-1.4
2,954,816	-	envZ	NIAGMN_14810	0.85	-0.3
2,954,816	-	envZ	NIAGMN_14810	0.85	-0.3
2,954,816	-	envZ	NIAGMN_14810	0.85	-1.0
2,954,816	-	envZ	NIAGMN_14810	0.85	+0.4
2,954,863	+	envZ	NIAGMN_14810	0.88	-0.2
2,954,909	-				-1.2
2,955,021	+				+0.6
2,955,022	-				+0.2
2,955,022	-				-0.7
2,955,057	+				-0.3
2,955,058	-				-2.2
2,955,058	-				-1.1
2,955,059	+				-0.3
2,955,059	+				+0.1
2,955,060	-				+0.0
2,955,060	-				+0.3
2,955,060	-				-0.2
2,955,064	+				-1.0
2,955,065	-				+1.0
2,955,072	-				-0.9
2,955,072	-				-0.2
2,955,072	-				-2.2
2,955,076	-				-0.7
2,955,076	-				+0.6
2,955,076	-				+0.4
2,955,097	-				+1.3
2,955,147	+				-0.3
2,955,147	+				-0.5
2,955,148	-				+0.1
2,955,148	-				+1.4
2,955,148	-				-0.8
2,955,219	+				+0.2
2,955,219	+				-0.2
2,955,219	+				-0.3
2,955,219	+				+0.7
2,955,219	+				+1.4
2,955,220	-				-0.4
2,955,220	-				+0.8
2,955,251	+				+1.4
2,955,251	+				+0.3
2,955,284	-	pckA	NIAGMN_14815	0.12	-1.7
2,955,356	-	pckA	NIAGMN_14815	0.16	-0.0
2,955,362	-	pckA	NIAGMN_14815	0.16	-2.8
2,955,370	+	pckA	NIAGMN_14815	0.17	-0.4
2,955,370	+	pckA	NIAGMN_14815	0.17	+0.3
2,955,370	+	pckA	NIAGMN_14815	0.17	-0.6
2,955,408	+	pckA	NIAGMN_14815	0.19	-0.2
2,955,408	+	pckA	NIAGMN_14815	0.19	-0.6
2,955,409	-	pckA	NIAGMN_14815	0.19	-0.0
2,955,433	+	pckA	NIAGMN_14815	0.21	-1.5
2,955,433	+	pckA	NIAGMN_14815	0.21	-0.0
2,955,434	-	pckA	NIAGMN_14815	0.21	+1.0
2,955,647	-	pckA	NIAGMN_14815	0.34	+0.8
2,955,647	-	pckA	NIAGMN_14815	0.34	-2.1
2,955,683	-	pckA	NIAGMN_14815	0.36	+1.0
2,955,692	-	pckA	NIAGMN_14815	0.37	+1.0
2,955,702	+	pckA	NIAGMN_14815	0.37	-1.8
2,955,702	+	pckA	NIAGMN_14815	0.37	-0.6
2,955,702	+	pckA	NIAGMN_14815	0.37	+0.2
2,955,702	+	pckA	NIAGMN_14815	0.37	+0.4
2,955,702	+	pckA	NIAGMN_14815	0.37	-1.3
2,955,702	+	pckA	NIAGMN_14815	0.37	+0.4
2,955,703	-	pckA	NIAGMN_14815	0.37	+1.0
2,955,703	-	pckA	NIAGMN_14815	0.37	-1.5
2,955,703	-	pckA	NIAGMN_14815	0.37	+0.5
2,955,816	+	pckA	NIAGMN_14815	0.44	-0.3
2,955,816	+	pckA	NIAGMN_14815	0.44	-2.4
2,955,817	-	pckA	NIAGMN_14815	0.44	-0.8
2,955,817	-	pckA	NIAGMN_14815	0.44	+0.3
2,955,881	-	pckA	NIAGMN_14815	0.48	-0.3
2,955,959	-	pckA	NIAGMN_14815	0.53	-1.3