Strain Fitness in Escherichia coli ECRC102 around NIAGMN_11575

Experiment: TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP9
2,291,023	+				+0.2
2,291,023	+				-1.8
2,291,023	+				+0.0
2,291,023	+				-0.8
2,291,024	-				-1.7
2,291,024	-				-0.5
2,291,024	-				+0.3
2,291,024	-				-0.8
2,291,024	-				+1.0
2,291,024	-				+0.0
2,291,059	+				+0.0
2,291,059	+				-0.7
2,291,060	-				-0.1
2,291,060	-				+0.3
2,291,060	-				+1.5
2,291,069	-				-0.0
2,291,069	-				+0.1
2,291,167	+	cdh	NIAGMN_11570	0.12	+2.0
2,291,168	-	cdh	NIAGMN_11570	0.12	-0.1
2,291,168	-	cdh	NIAGMN_11570	0.12	-1.0
2,291,178	+	cdh	NIAGMN_11570	0.13	-0.7
2,291,178	+	cdh	NIAGMN_11570	0.13	-1.1
2,291,192	-	cdh	NIAGMN_11570	0.15	-0.5
2,291,192	-	cdh	NIAGMN_11570	0.15	-1.9
2,291,208	-	cdh	NIAGMN_11570	0.17	-0.0
2,291,217	+	cdh	NIAGMN_11570	0.18	-0.1
2,291,217	+	cdh	NIAGMN_11570	0.18	+0.0
2,291,217	+	cdh	NIAGMN_11570	0.18	+0.9
2,291,217	+	cdh	NIAGMN_11570	0.18	-1.5
2,291,218	-	cdh	NIAGMN_11570	0.18	+0.1
2,291,218	-	cdh	NIAGMN_11570	0.18	-0.1
2,291,236	+	cdh	NIAGMN_11570	0.21	+1.0
2,291,236	+	cdh	NIAGMN_11570	0.21	-0.7
2,291,237	-	cdh	NIAGMN_11570	0.21	+0.6
2,291,256	+	cdh	NIAGMN_11570	0.23	+0.0
2,291,256	+	cdh	NIAGMN_11570	0.23	-0.8
2,291,257	-	cdh	NIAGMN_11570	0.23	+1.0
2,291,257	-	cdh	NIAGMN_11570	0.23	-0.8
2,291,257	-	cdh	NIAGMN_11570	0.23	+0.5
2,291,257	-	cdh	NIAGMN_11570	0.23	-0.2
2,291,257	-	cdh	NIAGMN_11570	0.23	-2.1
2,291,257	-	cdh	NIAGMN_11570	0.23	-0.5
2,291,257	-	cdh	NIAGMN_11570	0.23	-0.0
2,291,273	-	cdh	NIAGMN_11570	0.26	+0.5
2,291,273	-	cdh	NIAGMN_11570	0.26	-0.5
2,291,306	+	cdh	NIAGMN_11570	0.30	-1.5
2,291,307	-	cdh	NIAGMN_11570	0.30	-0.5
2,291,401	-	cdh	NIAGMN_11570	0.42	+0.0
2,291,409	+	cdh	NIAGMN_11570	0.44	-0.8
2,291,410	-	cdh	NIAGMN_11570	0.44	+0.0
2,291,410	-	cdh	NIAGMN_11570	0.44	+0.8
2,291,410	-	cdh	NIAGMN_11570	0.44	-0.1
2,291,410	-	cdh	NIAGMN_11570	0.44	+0.6
2,291,583	+	cdh	NIAGMN_11570	0.67	-0.8
2,291,584	-	cdh	NIAGMN_11570	0.67	+1.5
2,291,584	-	cdh	NIAGMN_11570	0.67	+0.0
2,291,586	+	cdh	NIAGMN_11570	0.67	-0.1
2,291,586	+	cdh	NIAGMN_11570	0.67	+0.6
2,291,587	-	cdh	NIAGMN_11570	0.67	+0.6
2,291,591	+	cdh	NIAGMN_11570	0.68	+1.0
2,291,591	+	cdh	NIAGMN_11570	0.68	-0.8
2,291,610	-	cdh	NIAGMN_11570	0.70	+0.0
2,291,610	-	cdh	NIAGMN_11570	0.70	+0.8
2,291,610	-	cdh	NIAGMN_11570	0.70	-0.6
2,291,626	-	cdh	NIAGMN_11570	0.72	+0.6
2,291,636	-	cdh	NIAGMN_11570	0.74	-0.8
2,291,646	-	cdh	NIAGMN_11570	0.75	+0.6
2,291,730	+	cdh	NIAGMN_11570	0.86	+0.7
2,291,731	-	cdh	NIAGMN_11570	0.86	+1.5
2,291,734	+	cdh	NIAGMN_11570	0.87	-0.2
2,291,735	-	cdh	NIAGMN_11570	0.87	+0.5
2,291,735	-	cdh	NIAGMN_11570	0.87	+1.2
2,291,735	-	cdh	NIAGMN_11570	0.87	+1.6
2,291,739	+	cdh	NIAGMN_11570	0.87	+0.2
2,291,740	-	cdh	NIAGMN_11570	0.87	+0.2
2,291,740	-	cdh	NIAGMN_11570	0.87	+0.5
2,291,740	-	cdh	NIAGMN_11570	0.87	-1.0
2,291,740	-	cdh	NIAGMN_11570	0.87	-0.1
2,291,740	-	cdh	NIAGMN_11570	0.87	-0.5
2,291,797	-				+0.6
2,291,797	-				-1.3
2,291,800	+				+0.0
2,291,800	+				-1.1
2,291,800	+				+0.0
2,291,800	+				+0.0
2,291,800	+				-1.2
2,291,800	+				-0.6
2,291,800	+				+0.7
2,291,800	+				-0.3
2,291,800	+				+0.0
2,291,801	-				+0.1
2,291,801	-				+0.3
2,291,801	-				+0.2
2,291,801	-				+0.7
2,291,849	+				+0.6
2,291,849	+				+0.7
2,291,850	-				+0.3
2,291,850	-				-2.1
2,291,891	-				+1.0
2,291,929	+				-0.3
2,291,929	+				+0.1
2,291,930	-				+0.1
2,291,930	-				+0.4
2,291,930	-				+0.2
2,292,036	-				+0.0
2,292,036	-				-1.9
2,292,097	-	sbp	NIAGMN_11575	0.16	-0.3
2,292,100	-	sbp	NIAGMN_11575	0.16	+0.0
2,292,100	-	sbp	NIAGMN_11575	0.16	+0.1
2,292,136	-	sbp	NIAGMN_11575	0.20	-1.8
2,292,142	-	sbp	NIAGMN_11575	0.20	-2.6
2,292,169	+	sbp	NIAGMN_11575	0.23	-0.5
2,292,169	+	sbp	NIAGMN_11575	0.23	+0.2
2,292,169	+	sbp	NIAGMN_11575	0.23	+1.9
2,292,170	-	sbp	NIAGMN_11575	0.23	+1.2
2,292,170	-	sbp	NIAGMN_11575	0.23	+0.6
2,292,226	+	sbp	NIAGMN_11575	0.29	+1.2
2,292,226	+	sbp	NIAGMN_11575	0.29	+0.1
2,292,226	+	sbp	NIAGMN_11575	0.29	-0.5
2,292,226	+	sbp	NIAGMN_11575	0.29	+0.8
2,292,227	-	sbp	NIAGMN_11575	0.29	-0.9
2,292,256	+	sbp	NIAGMN_11575	0.32	+2.1
2,292,257	-	sbp	NIAGMN_11575	0.32	-0.8
2,292,311	+	sbp	NIAGMN_11575	0.37	+1.8
2,292,312	-	sbp	NIAGMN_11575	0.37	+0.5
2,292,312	-	sbp	NIAGMN_11575	0.37	-0.5
2,292,312	-	sbp	NIAGMN_11575	0.37	-0.4
2,292,312	-	sbp	NIAGMN_11575	0.37	+0.9
2,292,388	-	sbp	NIAGMN_11575	0.45	-0.8
2,292,447	+	sbp	NIAGMN_11575	0.51	+0.1
2,292,465	+	sbp	NIAGMN_11575	0.53	+0.6
2,292,465	+	sbp	NIAGMN_11575	0.53	-0.8
2,292,568	+	sbp	NIAGMN_11575	0.63	+0.2
2,292,569	-	sbp	NIAGMN_11575	0.63	-1.3
2,292,572	+	sbp	NIAGMN_11575	0.64	-2.9
2,292,572	+	sbp	NIAGMN_11575	0.64	+0.1
2,292,573	-	sbp	NIAGMN_11575	0.64	+1.7
2,292,597	+	sbp	NIAGMN_11575	0.66	-1.2
2,292,675	+	sbp	NIAGMN_11575	0.74	-2.3
2,292,816	+	sbp	NIAGMN_11575	0.88	-0.9
2,292,816	+	sbp	NIAGMN_11575	0.88	-0.9
2,292,816	+	sbp	NIAGMN_11575	0.88	-0.7
2,292,817	-	sbp	NIAGMN_11575	0.88	-2.1
2,292,817	-	sbp	NIAGMN_11575	0.88	+0.5
2,292,817	-	sbp	NIAGMN_11575	0.88	-0.9
2,292,846	+				+0.3
2,292,846	+				+0.8
2,292,846	+				-0.2
2,292,847	-				+0.5
2,292,868	+				-0.8
2,292,914	+				-0.3
2,292,914	+				-0.0
2,292,915	-				+1.1
2,292,915	-				-0.7
2,292,945	+				+2.8
2,292,945	+				+1.6
2,292,945	+				+0.1
2,292,945	+				+0.5
2,292,945	+				-1.0
2,292,945	+				+0.2
2,292,945	+				-0.1
2,292,945	+				+0.5
2,292,945	+				+0.1
2,292,945	+				-0.3
2,292,945	+				+1.1
2,292,946	-				+2.6
2,292,946	-				-0.4
2,292,946	-				-1.2
2,292,946	-				+0.2
2,292,946	-				+0.1
2,292,946	-				+0.2
2,292,946	-				-0.8
2,292,946	-				-0.6
2,293,028	+				+0.4
2,293,028	+				-0.5
2,293,031	-				+0.8
2,293,031	-				+0.1
2,293,031	-				+0.5
2,293,251	+				-0.6
2,293,252	-				+0.7
2,293,252	-				-0.0
2,293,254	+				+0.7
2,293,255	-				-0.0
2,293,352	+	pfkA	NIAGMN_11585	0.11	-0.8
2,293,355	-	pfkA	NIAGMN_11585	0.11	-0.8
2,293,359	-	pfkA	NIAGMN_11585	0.11	+0.1
2,293,359	-	pfkA	NIAGMN_11585	0.11	+2.1
2,293,402	-	pfkA	NIAGMN_11585	0.16	+1.1
2,293,402	-	pfkA	NIAGMN_11585	0.16	+2.1
2,293,540	+	pfkA	NIAGMN_11585	0.30	+0.1
2,293,540	+	pfkA	NIAGMN_11585	0.30	+1.1
2,293,541	-	pfkA	NIAGMN_11585	0.30	+0.5
2,293,541	-	pfkA	NIAGMN_11585	0.30	+2.1
2,293,541	-	pfkA	NIAGMN_11585	0.30	+1.1
2,293,541	-	pfkA	NIAGMN_11585	0.30	+1.1
2,293,541	-	pfkA	NIAGMN_11585	0.30	+2.1
2,293,809	+	pfkA	NIAGMN_11585	0.58	+0.5
2,293,893	+	pfkA	NIAGMN_11585	0.67	+2.1