Strain Fitness in Escherichia coli ECRC102 around NIAGMN_10540

Experiment: TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP9
2,069,597	+				-1.0
2,069,598	-				+1.0
2,069,598	-				-0.0
2,069,638	+	phnN	NIAGMN_10530	0.16	+0.0
2,069,656	-	phnN	NIAGMN_10530	0.20	+0.1
2,069,749	+	phnN	NIAGMN_10530	0.36	+0.4
2,069,749	+	phnN	NIAGMN_10530	0.36	+1.1
2,069,749	+	phnN	NIAGMN_10530	0.36	+0.1
2,069,749	+	phnN	NIAGMN_10530	0.36	-0.3
2,069,750	-	phnN	NIAGMN_10530	0.36	-1.6
2,069,772	+	phnN	NIAGMN_10530	0.40	-1.6
2,069,772	+	phnN	NIAGMN_10530	0.40	-0.6
2,069,772	+	phnN	NIAGMN_10530	0.40	+0.4
2,069,773	-	phnN	NIAGMN_10530	0.41	+1.3
2,069,776	-	phnN	NIAGMN_10530	0.41	-0.7
2,069,994	+	phnN	NIAGMN_10530	0.80	+1.4
2,069,994	+	phnN	NIAGMN_10530	0.80	-0.1
2,069,996	+	phnN	NIAGMN_10530	0.80	-1.3
2,069,996	+	phnN	NIAGMN_10530	0.80	+0.1
2,069,996	+	phnN	NIAGMN_10530	0.80	-0.9
2,069,996	+	phnN	NIAGMN_10530	0.80	-0.2
2,069,996	+	phnN	NIAGMN_10530	0.80	-0.2
2,069,997	-	phnN	NIAGMN_10530	0.81	-0.6
2,069,997	-	phnN	NIAGMN_10530	0.81	-0.4
2,069,997	-	phnN	NIAGMN_10530	0.81	+0.4
2,069,997	-	phnN	NIAGMN_10530	0.81	-0.1
2,069,997	-	phnN	NIAGMN_10530	0.81	+0.1
2,070,163	-	phnO	NIAGMN_10535	0.15	+2.0
2,070,163	-	phnO	NIAGMN_10535	0.15	-1.0
2,070,206	-	phnO	NIAGMN_10535	0.25	+0.7
2,070,236	+	phnO	NIAGMN_10535	0.32	-1.0
2,070,271	+	phnO	NIAGMN_10535	0.40	-1.4
2,070,271	+	phnO	NIAGMN_10535	0.40	-0.1
2,070,342	+	phnO	NIAGMN_10535	0.57	+0.1
2,070,342	+	phnO	NIAGMN_10535	0.57	+0.3
2,070,376	+	phnO	NIAGMN_10535	0.65	-0.2
2,070,381	+	phnO	NIAGMN_10535	0.66	-0.3
2,070,473	+	phnO	NIAGMN_10535	0.87	-0.6
2,070,474	-	phnO	NIAGMN_10535	0.88	-0.3
2,070,524	+				+0.5
2,070,524	+				-1.6
2,070,525	-				+1.0
2,070,655	+	phnP	NIAGMN_10540	0.17	+0.1
2,070,757	-	phnP	NIAGMN_10540	0.30	-1.5
2,070,757	-	phnP	NIAGMN_10540	0.30	+2.0
2,070,761	+	phnP	NIAGMN_10540	0.31	+0.4
2,070,762	-	phnP	NIAGMN_10540	0.31	+0.6
2,070,781	+	phnP	NIAGMN_10540	0.33	-0.7
2,070,860	+	phnP	NIAGMN_10540	0.44	+0.1
2,070,928	+	phnP	NIAGMN_10540	0.53	-1.6
2,071,075	+	phnP	NIAGMN_10540	0.72	-0.2
2,071,075	+	phnP	NIAGMN_10540	0.72	-0.3
2,071,075	+	phnP	NIAGMN_10540	0.72	-0.4
2,071,135	+	phnP	NIAGMN_10540	0.80	-1.0
2,071,135	+	phnP	NIAGMN_10540	0.80	-1.2
2,071,135	+	phnP	NIAGMN_10540	0.80	-0.3
2,071,136	-	phnP	NIAGMN_10540	0.80	+1.0
2,071,136	-	phnP	NIAGMN_10540	0.80	-1.3
2,071,373	+				+0.0
2,071,374	-				-0.3
2,071,405	+	yjdP	NIAGMN_10545	0.13	+0.3
2,071,406	-	yjdP	NIAGMN_10545	0.13	+0.3
2,071,490	+	yjdP	NIAGMN_10545	0.38	-0.4
2,071,491	-	yjdP	NIAGMN_10545	0.39	+0.8
2,071,550	+	yjdP	NIAGMN_10545	0.57	-0.3
2,071,550	+	yjdP	NIAGMN_10545	0.57	-0.0
2,071,550	+	yjdP	NIAGMN_10545	0.57	-0.7
2,071,551	-	yjdP	NIAGMN_10545	0.57	+1.5
2,071,572	+	yjdP	NIAGMN_10545	0.63	+0.0
2,071,573	-	yjdP	NIAGMN_10545	0.64	-0.3
2,071,573	-	yjdP	NIAGMN_10545	0.64	+2.4
2,071,573	-	yjdP	NIAGMN_10545	0.64	+2.0
2,071,600	-	yjdP	NIAGMN_10545	0.72	+0.4
2,071,692	+				+0.4
2,071,716	-				-0.3
2,071,718	+				+0.2
2,071,718	+				-0.6
2,071,718	+				-0.9
2,071,718	+				+1.8
2,071,718	+				-1.6
2,071,719	-				-1.3
2,071,719	-				+0.6
2,071,719	-				+1.2
2,071,719	-				+1.0
2,071,726	-				+0.8
2,071,742	+				-0.3
2,071,749	-				-0.6
2,071,857	+				+2.0
2,071,857	+				+0.3
2,071,858	-				+2.3
2,071,878	+				+0.7
2,071,878	+				+0.0
2,071,879	-				-0.7
2,071,898	-				-0.6
2,071,953	+				-0.1
2,071,953	+				-0.5
2,071,954	-				-1.7
2,072,100	+		NIAGMN_10550	0.15	-1.1
2,072,136	+		NIAGMN_10550	0.17	-0.7
2,072,137	-		NIAGMN_10550	0.17	+0.1
2,072,188	-		NIAGMN_10550	0.19	-1.6
2,072,188	-		NIAGMN_10550	0.19	-1.8
2,072,260	+		NIAGMN_10550	0.22	-0.3