Experiment: TSB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02510 and MPMX26_02511 are separated by 45 nucleotides MPMX26_02511 and MPMX26_02512 are separated by 4 nucleotides MPMX26_02512 and MPMX26_02513 are separated by 21 nucleotides
MPMX26_02510: MPMX26_02510 - hypothetical protein, at 2,593,942 to 2,596,023
_02510
MPMX26_02511: MPMX26_02511 - hypothetical protein, at 2,596,069 to 2,596,605
_02511
MPMX26_02512: MPMX26_02512 - Response regulator PleD, at 2,596,610 to 2,596,978
_02512
MPMX26_02513: MPMX26_02513 - Alkaline phosphatase synthesis transcriptional regulatory protein PhoP, at 2,597,000 to 2,597,383
_02513
Position (kb)
2596
2597 Strain fitness (log2 ratio)
-2
-1
0
1 at 2595.075 kb on - strand, within MPMX26_02510 at 2595.102 kb on - strand, within MPMX26_02510 at 2595.102 kb on - strand, within MPMX26_02510 at 2595.102 kb on - strand, within MPMX26_02510 at 2595.102 kb on - strand, within MPMX26_02510 at 2595.102 kb on - strand, within MPMX26_02510 at 2595.109 kb on - strand, within MPMX26_02510 at 2595.159 kb on - strand, within MPMX26_02510 at 2595.159 kb on - strand, within MPMX26_02510 at 2595.159 kb on - strand, within MPMX26_02510 at 2595.159 kb on - strand, within MPMX26_02510 at 2595.159 kb on - strand, within MPMX26_02510 at 2595.159 kb on - strand, within MPMX26_02510 at 2595.159 kb on - strand, within MPMX26_02510 at 2595.159 kb on - strand, within MPMX26_02510 at 2595.183 kb on - strand, within MPMX26_02510 at 2595.183 kb on - strand, within MPMX26_02510 at 2595.217 kb on - strand, within MPMX26_02510 at 2595.217 kb on - strand, within MPMX26_02510 at 2595.217 kb on - strand, within MPMX26_02510 at 2595.276 kb on - strand, within MPMX26_02510 at 2595.276 kb on - strand, within MPMX26_02510 at 2595.280 kb on - strand, within MPMX26_02510 at 2595.280 kb on - strand, within MPMX26_02510 at 2595.280 kb on - strand, within MPMX26_02510 at 2595.282 kb on - strand, within MPMX26_02510 at 2595.329 kb on - strand, within MPMX26_02510 at 2595.343 kb on - strand, within MPMX26_02510 at 2595.375 kb on - strand, within MPMX26_02510 at 2595.375 kb on - strand, within MPMX26_02510 at 2595.381 kb on - strand, within MPMX26_02510 at 2595.389 kb on - strand, within MPMX26_02510 at 2595.498 kb on - strand, within MPMX26_02510 at 2595.498 kb on - strand, within MPMX26_02510 at 2595.498 kb on - strand, within MPMX26_02510 at 2595.613 kb on - strand, within MPMX26_02510 at 2595.613 kb on - strand, within MPMX26_02510 at 2595.621 kb on - strand, within MPMX26_02510 at 2595.663 kb on - strand, within MPMX26_02510 at 2595.807 kb on - strand, within MPMX26_02510 at 2595.936 kb on - strand at 2595.936 kb on - strand at 2595.973 kb on - strand at 2595.978 kb on - strand at 2595.986 kb on - strand at 2596.102 kb on - strand at 2596.104 kb on - strand at 2596.104 kb on - strand at 2596.189 kb on - strand, within MPMX26_02511 at 2596.255 kb on - strand, within MPMX26_02511 at 2596.303 kb on - strand, within MPMX26_02511 at 2596.325 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.348 kb on - strand, within MPMX26_02511 at 2596.393 kb on - strand, within MPMX26_02511 at 2596.411 kb on - strand, within MPMX26_02511 at 2596.411 kb on - strand, within MPMX26_02511 at 2596.411 kb on - strand, within MPMX26_02511 at 2596.423 kb on - strand, within MPMX26_02511 at 2596.423 kb on - strand, within MPMX26_02511 at 2596.423 kb on - strand, within MPMX26_02511 at 2596.425 kb on - strand, within MPMX26_02511 at 2596.425 kb on - strand, within MPMX26_02511 at 2596.460 kb on - strand, within MPMX26_02511 at 2596.555 kb on - strand at 2596.610 kb on - strand at 2596.610 kb on - strand at 2596.615 kb on - strand at 2596.615 kb on - strand at 2596.615 kb on - strand at 2596.615 kb on - strand at 2596.615 kb on - strand at 2596.615 kb on - strand at 2596.615 kb on - strand at 2596.630 kb on - strand at 2596.632 kb on - strand at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.096 kb on - strand, within MPMX26_02513 at 2597.123 kb on - strand, within MPMX26_02513 at 2597.123 kb on - strand, within MPMX26_02513 at 2597.123 kb on - strand, within MPMX26_02513 at 2597.140 kb on - strand, within MPMX26_02513 at 2597.184 kb on - strand, within MPMX26_02513 at 2597.185 kb on - strand, within MPMX26_02513 at 2597.185 kb on - strand, within MPMX26_02513 at 2597.185 kb on - strand, within MPMX26_02513 at 2597.185 kb on - strand, within MPMX26_02513 at 2597.185 kb on - strand, within MPMX26_02513 at 2597.242 kb on - strand, within MPMX26_02513 at 2597.252 kb on - strand, within MPMX26_02513 at 2597.299 kb on - strand, within MPMX26_02513 at 2597.299 kb on - strand, within MPMX26_02513
Per-strain Table
Position Strand Gene LocusTag Fraction TSB remove 2,595,075 - MPMX26_02510 0.54 -0.6 2,595,102 - MPMX26_02510 0.56 +0.1 2,595,102 - MPMX26_02510 0.56 -0.5 2,595,102 - MPMX26_02510 0.56 -0.1 2,595,102 - MPMX26_02510 0.56 -0.0 2,595,102 - MPMX26_02510 0.56 -0.0 2,595,109 - MPMX26_02510 0.56 +0.5 2,595,159 - MPMX26_02510 0.58 +0.6 2,595,159 - MPMX26_02510 0.58 +0.1 2,595,159 - MPMX26_02510 0.58 +0.3 2,595,159 - MPMX26_02510 0.58 -0.4 2,595,159 - MPMX26_02510 0.58 +0.1 2,595,159 - MPMX26_02510 0.58 +0.6 2,595,159 - MPMX26_02510 0.58 +0.2 2,595,159 - MPMX26_02510 0.58 -0.3 2,595,183 - MPMX26_02510 0.60 +0.2 2,595,183 - MPMX26_02510 0.60 -0.4 2,595,217 - MPMX26_02510 0.61 -0.4 2,595,217 - MPMX26_02510 0.61 +0.7 2,595,217 - MPMX26_02510 0.61 +0.1 2,595,276 - MPMX26_02510 0.64 -0.2 2,595,276 - MPMX26_02510 0.64 +0.7 2,595,280 - MPMX26_02510 0.64 -0.2 2,595,280 - MPMX26_02510 0.64 +0.7 2,595,280 - MPMX26_02510 0.64 +0.1 2,595,282 - MPMX26_02510 0.64 +0.4 2,595,329 - MPMX26_02510 0.67 +0.5 2,595,343 - MPMX26_02510 0.67 +0.4 2,595,375 - MPMX26_02510 0.69 -0.6 2,595,375 - MPMX26_02510 0.69 -0.6 2,595,381 - MPMX26_02510 0.69 -0.3 2,595,389 - MPMX26_02510 0.70 +0.0 2,595,498 - MPMX26_02510 0.75 +0.1 2,595,498 - MPMX26_02510 0.75 +0.6 2,595,498 - MPMX26_02510 0.75 +0.2 2,595,613 - MPMX26_02510 0.80 +0.2 2,595,613 - MPMX26_02510 0.80 +0.1 2,595,621 - MPMX26_02510 0.81 +0.1 2,595,663 - MPMX26_02510 0.83 -0.2 2,595,807 - MPMX26_02510 0.90 +0.4 2,595,936 - -0.1 2,595,936 - +0.5 2,595,973 - -0.1 2,595,978 - +0.0 2,595,986 - +0.6 2,596,102 - -0.5 2,596,104 - +0.2 2,596,104 - -0.1 2,596,189 - MPMX26_02511 0.22 +0.0 2,596,255 - MPMX26_02511 0.35 -0.1 2,596,303 - MPMX26_02511 0.44 -0.2 2,596,325 - MPMX26_02511 0.48 +0.4 2,596,348 - MPMX26_02511 0.52 +0.2 2,596,348 - MPMX26_02511 0.52 -0.1 2,596,348 - MPMX26_02511 0.52 -0.0 2,596,348 - MPMX26_02511 0.52 +0.7 2,596,348 - MPMX26_02511 0.52 +0.1 2,596,348 - MPMX26_02511 0.52 +0.1 2,596,348 - MPMX26_02511 0.52 +0.3 2,596,348 - MPMX26_02511 0.52 +0.1 2,596,348 - MPMX26_02511 0.52 +0.2 2,596,348 - MPMX26_02511 0.52 +0.1 2,596,348 - MPMX26_02511 0.52 +0.2 2,596,348 - MPMX26_02511 0.52 -0.1 2,596,348 - MPMX26_02511 0.52 -0.7 2,596,348 - MPMX26_02511 0.52 +1.3 2,596,348 - MPMX26_02511 0.52 -0.3 2,596,393 - MPMX26_02511 0.60 -0.7 2,596,411 - MPMX26_02511 0.64 +0.3 2,596,411 - MPMX26_02511 0.64 +0.1 2,596,411 - MPMX26_02511 0.64 -0.4 2,596,423 - MPMX26_02511 0.66 -0.5 2,596,423 - MPMX26_02511 0.66 -0.3 2,596,423 - MPMX26_02511 0.66 +0.1 2,596,425 - MPMX26_02511 0.66 +0.2 2,596,425 - MPMX26_02511 0.66 +0.1 2,596,460 - MPMX26_02511 0.73 -0.1 2,596,555 - +0.3 2,596,610 - -0.1 2,596,610 - +0.1 2,596,615 - -0.4 2,596,615 - -0.2 2,596,615 - +0.2 2,596,615 - -0.2 2,596,615 - +0.1 2,596,615 - +0.3 2,596,615 - +0.2 2,596,630 - -0.6 2,596,632 - +0.6 2,597,096 - MPMX26_02513 0.25 -0.3 2,597,096 - MPMX26_02513 0.25 +0.2 2,597,096 - MPMX26_02513 0.25 -0.1 2,597,096 - MPMX26_02513 0.25 +0.7 2,597,096 - MPMX26_02513 0.25 -0.4 2,597,096 - MPMX26_02513 0.25 +0.1 2,597,096 - MPMX26_02513 0.25 -0.1 2,597,096 - MPMX26_02513 0.25 +0.4 2,597,096 - MPMX26_02513 0.25 +0.2 2,597,096 - MPMX26_02513 0.25 +0.4 2,597,096 - MPMX26_02513 0.25 +0.1 2,597,096 - MPMX26_02513 0.25 +0.5 2,597,096 - MPMX26_02513 0.25 -1.1 2,597,096 - MPMX26_02513 0.25 +0.3 2,597,096 - MPMX26_02513 0.25 +0.1 2,597,123 - MPMX26_02513 0.32 +0.0 2,597,123 - MPMX26_02513 0.32 -0.4 2,597,123 - MPMX26_02513 0.32 -0.1 2,597,140 - MPMX26_02513 0.36 -0.4 2,597,184 - MPMX26_02513 0.48 -0.2 2,597,185 - MPMX26_02513 0.48 -0.3 2,597,185 - MPMX26_02513 0.48 +0.1 2,597,185 - MPMX26_02513 0.48 -0.3 2,597,185 - MPMX26_02513 0.48 +0.1 2,597,185 - MPMX26_02513 0.48 -0.2 2,597,242 - MPMX26_02513 0.63 -2.0 2,597,252 - MPMX26_02513 0.66 -0.2 2,597,299 - MPMX26_02513 0.78 +0.6 2,597,299 - MPMX26_02513 0.78 -0.4
Or see this region's nucleotide sequence