Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02511

Experiment: TSB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02510 and MPMX26_02511 are separated by 45 nucleotidesMPMX26_02511 and MPMX26_02512 are separated by 4 nucleotidesMPMX26_02512 and MPMX26_02513 are separated by 21 nucleotides MPMX26_02510: MPMX26_02510 - hypothetical protein, at 2,593,942 to 2,596,023 _02510 MPMX26_02511: MPMX26_02511 - hypothetical protein, at 2,596,069 to 2,596,605 _02511 MPMX26_02512: MPMX26_02512 - Response regulator PleD, at 2,596,610 to 2,596,978 _02512 MPMX26_02513: MPMX26_02513 - Alkaline phosphatase synthesis transcriptional regulatory protein PhoP, at 2,597,000 to 2,597,383 _02513 Position (kb) 2596 2597Strain fitness (log2 ratio) -2 -1 0 1at 2595.075 kb on - strand, within MPMX26_02510at 2595.102 kb on - strand, within MPMX26_02510at 2595.102 kb on - strand, within MPMX26_02510at 2595.102 kb on - strand, within MPMX26_02510at 2595.102 kb on - strand, within MPMX26_02510at 2595.102 kb on - strand, within MPMX26_02510at 2595.109 kb on - strand, within MPMX26_02510at 2595.159 kb on - strand, within MPMX26_02510at 2595.159 kb on - strand, within MPMX26_02510at 2595.159 kb on - strand, within MPMX26_02510at 2595.159 kb on - strand, within MPMX26_02510at 2595.159 kb on - strand, within MPMX26_02510at 2595.159 kb on - strand, within MPMX26_02510at 2595.159 kb on - strand, within MPMX26_02510at 2595.159 kb on - strand, within MPMX26_02510at 2595.183 kb on - strand, within MPMX26_02510at 2595.183 kb on - strand, within MPMX26_02510at 2595.217 kb on - strand, within MPMX26_02510at 2595.217 kb on - strand, within MPMX26_02510at 2595.217 kb on - strand, within MPMX26_02510at 2595.276 kb on - strand, within MPMX26_02510at 2595.276 kb on - strand, within MPMX26_02510at 2595.280 kb on - strand, within MPMX26_02510at 2595.280 kb on - strand, within MPMX26_02510at 2595.280 kb on - strand, within MPMX26_02510at 2595.282 kb on - strand, within MPMX26_02510at 2595.329 kb on - strand, within MPMX26_02510at 2595.343 kb on - strand, within MPMX26_02510at 2595.375 kb on - strand, within MPMX26_02510at 2595.375 kb on - strand, within MPMX26_02510at 2595.381 kb on - strand, within MPMX26_02510at 2595.389 kb on - strand, within MPMX26_02510at 2595.498 kb on - strand, within MPMX26_02510at 2595.498 kb on - strand, within MPMX26_02510at 2595.498 kb on - strand, within MPMX26_02510at 2595.613 kb on - strand, within MPMX26_02510at 2595.613 kb on - strand, within MPMX26_02510at 2595.621 kb on - strand, within MPMX26_02510at 2595.663 kb on - strand, within MPMX26_02510at 2595.807 kb on - strand, within MPMX26_02510at 2595.936 kb on - strandat 2595.936 kb on - strandat 2595.973 kb on - strandat 2595.978 kb on - strandat 2595.986 kb on - strandat 2596.102 kb on - strandat 2596.104 kb on - strandat 2596.104 kb on - strandat 2596.189 kb on - strand, within MPMX26_02511at 2596.255 kb on - strand, within MPMX26_02511at 2596.303 kb on - strand, within MPMX26_02511at 2596.325 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.348 kb on - strand, within MPMX26_02511at 2596.393 kb on - strand, within MPMX26_02511at 2596.411 kb on - strand, within MPMX26_02511at 2596.411 kb on - strand, within MPMX26_02511at 2596.411 kb on - strand, within MPMX26_02511at 2596.423 kb on - strand, within MPMX26_02511at 2596.423 kb on - strand, within MPMX26_02511at 2596.423 kb on - strand, within MPMX26_02511at 2596.425 kb on - strand, within MPMX26_02511at 2596.425 kb on - strand, within MPMX26_02511at 2596.460 kb on - strand, within MPMX26_02511at 2596.555 kb on - strandat 2596.610 kb on - strandat 2596.610 kb on - strandat 2596.615 kb on - strandat 2596.615 kb on - strandat 2596.615 kb on - strandat 2596.615 kb on - strandat 2596.615 kb on - strandat 2596.615 kb on - strandat 2596.615 kb on - strandat 2596.630 kb on - strandat 2596.632 kb on - strandat 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.096 kb on - strand, within MPMX26_02513at 2597.123 kb on - strand, within MPMX26_02513at 2597.123 kb on - strand, within MPMX26_02513at 2597.123 kb on - strand, within MPMX26_02513at 2597.140 kb on - strand, within MPMX26_02513at 2597.184 kb on - strand, within MPMX26_02513at 2597.185 kb on - strand, within MPMX26_02513at 2597.185 kb on - strand, within MPMX26_02513at 2597.185 kb on - strand, within MPMX26_02513at 2597.185 kb on - strand, within MPMX26_02513at 2597.185 kb on - strand, within MPMX26_02513at 2597.242 kb on - strand, within MPMX26_02513at 2597.252 kb on - strand, within MPMX26_02513at 2597.299 kb on - strand, within MPMX26_02513at 2597.299 kb on - strand, within MPMX26_02513

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB
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2,595,075 - MPMX26_02510 0.54 -0.6
2,595,102 - MPMX26_02510 0.56 +0.1
2,595,102 - MPMX26_02510 0.56 -0.5
2,595,102 - MPMX26_02510 0.56 -0.1
2,595,102 - MPMX26_02510 0.56 -0.0
2,595,102 - MPMX26_02510 0.56 -0.0
2,595,109 - MPMX26_02510 0.56 +0.5
2,595,159 - MPMX26_02510 0.58 +0.6
2,595,159 - MPMX26_02510 0.58 +0.1
2,595,159 - MPMX26_02510 0.58 +0.3
2,595,159 - MPMX26_02510 0.58 -0.4
2,595,159 - MPMX26_02510 0.58 +0.1
2,595,159 - MPMX26_02510 0.58 +0.6
2,595,159 - MPMX26_02510 0.58 +0.2
2,595,159 - MPMX26_02510 0.58 -0.3
2,595,183 - MPMX26_02510 0.60 +0.2
2,595,183 - MPMX26_02510 0.60 -0.4
2,595,217 - MPMX26_02510 0.61 -0.4
2,595,217 - MPMX26_02510 0.61 +0.7
2,595,217 - MPMX26_02510 0.61 +0.1
2,595,276 - MPMX26_02510 0.64 -0.2
2,595,276 - MPMX26_02510 0.64 +0.7
2,595,280 - MPMX26_02510 0.64 -0.2
2,595,280 - MPMX26_02510 0.64 +0.7
2,595,280 - MPMX26_02510 0.64 +0.1
2,595,282 - MPMX26_02510 0.64 +0.4
2,595,329 - MPMX26_02510 0.67 +0.5
2,595,343 - MPMX26_02510 0.67 +0.4
2,595,375 - MPMX26_02510 0.69 -0.6
2,595,375 - MPMX26_02510 0.69 -0.6
2,595,381 - MPMX26_02510 0.69 -0.3
2,595,389 - MPMX26_02510 0.70 +0.0
2,595,498 - MPMX26_02510 0.75 +0.1
2,595,498 - MPMX26_02510 0.75 +0.6
2,595,498 - MPMX26_02510 0.75 +0.2
2,595,613 - MPMX26_02510 0.80 +0.2
2,595,613 - MPMX26_02510 0.80 +0.1
2,595,621 - MPMX26_02510 0.81 +0.1
2,595,663 - MPMX26_02510 0.83 -0.2
2,595,807 - MPMX26_02510 0.90 +0.4
2,595,936 - -0.1
2,595,936 - +0.5
2,595,973 - -0.1
2,595,978 - +0.0
2,595,986 - +0.6
2,596,102 - -0.5
2,596,104 - +0.2
2,596,104 - -0.1
2,596,189 - MPMX26_02511 0.22 +0.0
2,596,255 - MPMX26_02511 0.35 -0.1
2,596,303 - MPMX26_02511 0.44 -0.2
2,596,325 - MPMX26_02511 0.48 +0.4
2,596,348 - MPMX26_02511 0.52 +0.2
2,596,348 - MPMX26_02511 0.52 -0.1
2,596,348 - MPMX26_02511 0.52 -0.0
2,596,348 - MPMX26_02511 0.52 +0.7
2,596,348 - MPMX26_02511 0.52 +0.1
2,596,348 - MPMX26_02511 0.52 +0.1
2,596,348 - MPMX26_02511 0.52 +0.3
2,596,348 - MPMX26_02511 0.52 +0.1
2,596,348 - MPMX26_02511 0.52 +0.2
2,596,348 - MPMX26_02511 0.52 +0.1
2,596,348 - MPMX26_02511 0.52 +0.2
2,596,348 - MPMX26_02511 0.52 -0.1
2,596,348 - MPMX26_02511 0.52 -0.7
2,596,348 - MPMX26_02511 0.52 +1.3
2,596,348 - MPMX26_02511 0.52 -0.3
2,596,393 - MPMX26_02511 0.60 -0.7
2,596,411 - MPMX26_02511 0.64 +0.3
2,596,411 - MPMX26_02511 0.64 +0.1
2,596,411 - MPMX26_02511 0.64 -0.4
2,596,423 - MPMX26_02511 0.66 -0.5
2,596,423 - MPMX26_02511 0.66 -0.3
2,596,423 - MPMX26_02511 0.66 +0.1
2,596,425 - MPMX26_02511 0.66 +0.2
2,596,425 - MPMX26_02511 0.66 +0.1
2,596,460 - MPMX26_02511 0.73 -0.1
2,596,555 - +0.3
2,596,610 - -0.1
2,596,610 - +0.1
2,596,615 - -0.4
2,596,615 - -0.2
2,596,615 - +0.2
2,596,615 - -0.2
2,596,615 - +0.1
2,596,615 - +0.3
2,596,615 - +0.2
2,596,630 - -0.6
2,596,632 - +0.6
2,597,096 - MPMX26_02513 0.25 -0.3
2,597,096 - MPMX26_02513 0.25 +0.2
2,597,096 - MPMX26_02513 0.25 -0.1
2,597,096 - MPMX26_02513 0.25 +0.7
2,597,096 - MPMX26_02513 0.25 -0.4
2,597,096 - MPMX26_02513 0.25 +0.1
2,597,096 - MPMX26_02513 0.25 -0.1
2,597,096 - MPMX26_02513 0.25 +0.4
2,597,096 - MPMX26_02513 0.25 +0.2
2,597,096 - MPMX26_02513 0.25 +0.4
2,597,096 - MPMX26_02513 0.25 +0.1
2,597,096 - MPMX26_02513 0.25 +0.5
2,597,096 - MPMX26_02513 0.25 -1.1
2,597,096 - MPMX26_02513 0.25 +0.3
2,597,096 - MPMX26_02513 0.25 +0.1
2,597,123 - MPMX26_02513 0.32 +0.0
2,597,123 - MPMX26_02513 0.32 -0.4
2,597,123 - MPMX26_02513 0.32 -0.1
2,597,140 - MPMX26_02513 0.36 -0.4
2,597,184 - MPMX26_02513 0.48 -0.2
2,597,185 - MPMX26_02513 0.48 -0.3
2,597,185 - MPMX26_02513 0.48 +0.1
2,597,185 - MPMX26_02513 0.48 -0.3
2,597,185 - MPMX26_02513 0.48 +0.1
2,597,185 - MPMX26_02513 0.48 -0.2
2,597,242 - MPMX26_02513 0.63 -2.0
2,597,252 - MPMX26_02513 0.66 -0.2
2,597,299 - MPMX26_02513 0.78 +0.6
2,597,299 - MPMX26_02513 0.78 -0.4

Or see this region's nucleotide sequence